BLASTX nr result

ID: Cnidium21_contig00017232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017232
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus co...   531   e-149
ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|2...   530   e-148
ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|2...   523   e-146
emb|CBI19788.3| unnamed protein product [Vitis vinifera]              522   e-146
ref|XP_002279779.1| PREDICTED: coatomer subunit alpha-1 [Vitis v...   522   e-146

>ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus communis]
            gi|223547980|gb|EEF49472.1| coatomer alpha subunit,
            putative [Ricinus communis]
          Length = 1217

 Score =  531 bits (1368), Expect = e-149
 Identities = 256/295 (86%), Positives = 279/295 (94%)
 Frame = +3

Query: 3    YELYIIPKDSFGRGDTIQEAKRGLGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIIKKSP 182
            YELY+IPKDS  RGDT+QEAKRG GGSA+FVARNRFAVL+KSSNQVLVKNLKNE++KKS 
Sbjct: 391  YELYVIPKDSISRGDTVQEAKRGAGGSAIFVARNRFAVLDKSSNQVLVKNLKNEVVKKSS 450

Query: 183  LPVPTDAIFYAGTGNLLCRSEDRVVIFDLQQRILLGDLQTSFVRYVVWSNDMESVALLSK 362
            LP+  DAIFYAGTGNLLCR+EDRVVIFDLQQRI+LGDLQT FV+YVVWSNDMESVALLSK
Sbjct: 451  LPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRIVLGDLQTPFVKYVVWSNDMESVALLSK 510

Query: 363  HSIVIADKKLAHRCTLHETIRVKSGAWDDNGVFIYTTLTHIKYCLPNGDSGIVKTLDVPV 542
            H+I+IA KKL H+CTLHETIRVKSGAWDDNGVFIYTTL HIKYCLPNGDSGI++TLDVP+
Sbjct: 511  HAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPI 570

Query: 543  YITKIFGNTIFCLDRDGKNRPIIIDSTEYVFKLSLLREKYGHVMTMIRKSDLCGQAMIAY 722
            Y+TK+ GNTIFCLDRDGK+R I ID+TEY+FKLSLLR+KY HVM+MIR S LCGQAMIAY
Sbjct: 571  YVTKVSGNTIFCLDRDGKSRHIDIDATEYMFKLSLLRKKYDHVMSMIRNSQLCGQAMIAY 630

Query: 723  LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR 887
            LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR
Sbjct: 631  LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR 685


>ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|222858686|gb|EEE96233.1|
            predicted protein [Populus trichocarpa]
          Length = 1220

 Score =  530 bits (1365), Expect = e-148
 Identities = 254/295 (86%), Positives = 279/295 (94%)
 Frame = +3

Query: 3    YELYIIPKDSFGRGDTIQEAKRGLGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIIKKSP 182
            YELY+IPKDS  RGD + EAKRG GGSAVFVARNRFAVL+KSSNQVLVKNLKNE++KKS 
Sbjct: 391  YELYVIPKDSIARGDAVPEAKRGAGGSAVFVARNRFAVLDKSSNQVLVKNLKNEVVKKSG 450

Query: 183  LPVPTDAIFYAGTGNLLCRSEDRVVIFDLQQRILLGDLQTSFVRYVVWSNDMESVALLSK 362
            LP+  DAIFYAGTGNLLCR+EDRVVIFDLQQR++LG+LQT FV+YVVWSNDMESVALLSK
Sbjct: 451  LPISCDAIFYAGTGNLLCRAEDRVVIFDLQQRLVLGELQTPFVKYVVWSNDMESVALLSK 510

Query: 363  HSIVIADKKLAHRCTLHETIRVKSGAWDDNGVFIYTTLTHIKYCLPNGDSGIVKTLDVPV 542
            H+I+IA KKL H+CTLHETIRVKSGAWDDNGVFIYTTL HIKYCLPNGDSGI++TLDVP+
Sbjct: 511  HAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPI 570

Query: 543  YITKIFGNTIFCLDRDGKNRPIIIDSTEYVFKLSLLREKYGHVMTMIRKSDLCGQAMIAY 722
            YITKI GNTIFCLDRDGKN+PI+ID+TEY+FKLSLL+++Y HVM+MIR S LCGQAMIAY
Sbjct: 571  YITKISGNTIFCLDRDGKNKPIVIDATEYIFKLSLLKKRYDHVMSMIRNSQLCGQAMIAY 630

Query: 723  LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR 887
            LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR
Sbjct: 631  LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR 685


>ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|222868554|gb|EEF05685.1|
            predicted protein [Populus trichocarpa]
          Length = 1218

 Score =  523 bits (1346), Expect = e-146
 Identities = 249/295 (84%), Positives = 279/295 (94%)
 Frame = +3

Query: 3    YELYIIPKDSFGRGDTIQEAKRGLGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIIKKSP 182
            YELY+IP+DS  RGD + EAKRG+GGSAVFVARNRFAVL+KSSNQVLVKNLKNE++KKS 
Sbjct: 391  YELYVIPRDSIARGDAVPEAKRGVGGSAVFVARNRFAVLDKSSNQVLVKNLKNEVVKKSS 450

Query: 183  LPVPTDAIFYAGTGNLLCRSEDRVVIFDLQQRILLGDLQTSFVRYVVWSNDMESVALLSK 362
            LP+  DAIFYAGTGNLLCR+EDRVVIFDLQQR++LG+LQT F++YV+WSNDMESVALLSK
Sbjct: 451  LPISADAIFYAGTGNLLCRTEDRVVIFDLQQRLVLGELQTPFIKYVIWSNDMESVALLSK 510

Query: 363  HSIVIADKKLAHRCTLHETIRVKSGAWDDNGVFIYTTLTHIKYCLPNGDSGIVKTLDVPV 542
            H+I+IA KKL H+CTLHETIRVKSGAWDDNGVFIYTTL HIKYCLPNGDSGI++TL+VP+
Sbjct: 511  HAIIIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLNVPI 570

Query: 543  YITKIFGNTIFCLDRDGKNRPIIIDSTEYVFKLSLLREKYGHVMTMIRKSDLCGQAMIAY 722
            YITKI GNTIFCLDRDGKN+ I+ID+TEY+FKLSLL++KY +VM+MIR S LCGQAMIAY
Sbjct: 571  YITKISGNTIFCLDRDGKNKAIVIDATEYIFKLSLLKKKYENVMSMIRNSQLCGQAMIAY 630

Query: 723  LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR 887
            LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR
Sbjct: 631  LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR 685


>emb|CBI19788.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  522 bits (1345), Expect = e-146
 Identities = 250/295 (84%), Positives = 280/295 (94%)
 Frame = +3

Query: 3    YELYIIPKDSFGRGDTIQEAKRGLGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIIKKSP 182
            YELYI+P+DS GRGDT+Q+AKRG+GGSAVFVARNRFAVLEKSSNQVLVKNLKNEI+KKS 
Sbjct: 391  YELYIVPRDSIGRGDTVQDAKRGVGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSV 450

Query: 183  LPVPTDAIFYAGTGNLLCRSEDRVVIFDLQQRILLGDLQTSFVRYVVWSNDMESVALLSK 362
            LPV  DAIFYAGTGNLLCR+EDRVV+FDLQQR++LG+LQTSF+RYVVWSNDME+VALLSK
Sbjct: 451  LPVAADAIFYAGTGNLLCRAEDRVVVFDLQQRLVLGELQTSFIRYVVWSNDMENVALLSK 510

Query: 363  HSIVIADKKLAHRCTLHETIRVKSGAWDDNGVFIYTTLTHIKYCLPNGDSGIVKTLDVPV 542
            H+I+IA KKL HRCTLHETIRVKSGAWDDNGVFIYTTL HIKYCLPNGD+GI++TLDVPV
Sbjct: 511  HTIIIASKKLEHRCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDNGIIRTLDVPV 570

Query: 543  YITKIFGNTIFCLDRDGKNRPIIIDSTEYVFKLSLLREKYGHVMTMIRKSDLCGQAMIAY 722
            YITK+  NT++CLDRDGKN  + ID+TEYVFKLSLL++++  VM+MIR S+LCGQAMIAY
Sbjct: 571  YITKVSQNTVYCLDRDGKNLAVAIDATEYVFKLSLLKKRFDQVMSMIRSSELCGQAMIAY 630

Query: 723  LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR 887
            LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEID+KDHWYRLGVEALR
Sbjct: 631  LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDKKDHWYRLGVEALR 685


>ref|XP_002279779.1| PREDICTED: coatomer subunit alpha-1 [Vitis vinifera]
          Length = 1217

 Score =  522 bits (1345), Expect = e-146
 Identities = 250/295 (84%), Positives = 280/295 (94%)
 Frame = +3

Query: 3    YELYIIPKDSFGRGDTIQEAKRGLGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIIKKSP 182
            YELYI+P+DS GRGDT+Q+AKRG+GGSAVFVARNRFAVLEKSSNQVLVKNLKNEI+KKS 
Sbjct: 391  YELYIVPRDSIGRGDTVQDAKRGVGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSV 450

Query: 183  LPVPTDAIFYAGTGNLLCRSEDRVVIFDLQQRILLGDLQTSFVRYVVWSNDMESVALLSK 362
            LPV  DAIFYAGTGNLLCR+EDRVV+FDLQQR++LG+LQTSF+RYVVWSNDME+VALLSK
Sbjct: 451  LPVAADAIFYAGTGNLLCRAEDRVVVFDLQQRLVLGELQTSFIRYVVWSNDMENVALLSK 510

Query: 363  HSIVIADKKLAHRCTLHETIRVKSGAWDDNGVFIYTTLTHIKYCLPNGDSGIVKTLDVPV 542
            H+I+IA KKL HRCTLHETIRVKSGAWDDNGVFIYTTL HIKYCLPNGD+GI++TLDVPV
Sbjct: 511  HTIIIASKKLEHRCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDNGIIRTLDVPV 570

Query: 543  YITKIFGNTIFCLDRDGKNRPIIIDSTEYVFKLSLLREKYGHVMTMIRKSDLCGQAMIAY 722
            YITK+  NT++CLDRDGKN  + ID+TEYVFKLSLL++++  VM+MIR S+LCGQAMIAY
Sbjct: 571  YITKVSQNTVYCLDRDGKNLAVAIDATEYVFKLSLLKKRFDQVMSMIRSSELCGQAMIAY 630

Query: 723  LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDEKDHWYRLGVEALR 887
            LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEID+KDHWYRLGVEALR
Sbjct: 631  LQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASAKEIDKKDHWYRLGVEALR 685


Top