BLASTX nr result
ID: Cnidium21_contig00017228
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00017228
(682 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula] 80 3e-25
ref|XP_003615833.1| FAR1-related protein [Medicago truncatula] g... 78 7e-23
ref|XP_003603917.1| FAR1-related protein [Medicago truncatula] g... 70 1e-20
gb|AAF66982.1| transposase [Zea mays] 77 2e-18
ref|XP_002467387.1| hypothetical protein SORBIDRAFT_01g026910 [S... 72 8e-17
>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
Length = 800
Score = 80.5 bits (197), Expect(2) = 3e-25
Identities = 42/102 (41%), Positives = 61/102 (59%)
Frame = -1
Query: 682 AFFRDKPMFGLMRTTSRSESENNFFSQFHRHSDTLCEFYLRFESAMDKQRHESARLTEEG 503
A+F+D M G++RTTSRSESEN+FF + H+ TL EF++RF+SA+ QRH+
Sbjct: 481 AYFKDTFMAGILRTTSRSESENSFFGNYLNHNLTLVEFWVRFDSALAAQRHKELFADNNT 540
Query: 502 RSAIPSTVSTLFLEADAAQLYTRPIFYKVQVEILASCYDMRI 377
+ P + LE A ++YT FY Q E+ ++C D I
Sbjct: 541 LHSNPELNMHMNLEKHAREVYTHENFYIFQKELWSACVDCGI 582
Score = 60.8 bits (146), Expect(2) = 3e-25
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = -3
Query: 344 NLSNERCEDVKMKDKLFEVKVSQYHAECSCKKFVMCGILCRHAFFALNQFEVVKIPRNLV 165
NLS ++ K + +S A CSCK F GI CRH F L +IP + +
Sbjct: 591 NLSFSILDNAVRKHREVVYCLSNNIAHCSCKMFESEGIPCRHILFILKGKGFSEIPSHYI 650
Query: 164 LNRWSRIAEHSHSSKFPG-VSDAFGKVENVSLKVTNIWFNFQKTMNKAGVDMEKL 3
+NRW+++A G V +A K E+ S V+ W K M+ AG + EKL
Sbjct: 651 VNRWTKLATSKPIFDCDGNVLEACSKFESESTLVSKTWSQLLKCMHMAGTNKEKL 705
>ref|XP_003615833.1| FAR1-related protein [Medicago truncatula]
gi|355517168|gb|AES98791.1| FAR1-related protein
[Medicago truncatula]
Length = 662
Score = 78.2 bits (191), Expect(2) = 7e-23
Identities = 43/119 (36%), Positives = 67/119 (56%)
Frame = -1
Query: 682 AFFRDKPMFGLMRTTSRSESENNFFSQFHRHSDTLCEFYLRFESAMDKQRHESARLTEEG 503
A+F+D + G+MRTTSRSESEN+F+ F + L EF++RF+SA++ QRH+
Sbjct: 347 AYFKDVLLAGIMRTTSRSESENSFYGNFLNPNVNLVEFWMRFDSAIEAQRHKELLADNSS 406
Query: 502 RSAIPSTVSTLFLEADAAQLYTRPIFYKVQVEILASCYDMRIVDMGPLVDGIKTYQMKD 326
+IP + +E A +Y R FY Q E+ +C D I + DG++ + + D
Sbjct: 407 IHSIPKLMLDRDIEKHARDVYAREKFYIFQKELWMACVDCGIENKKE-EDGMEIFLVHD 464
Score = 55.1 bits (131), Expect(2) = 7e-23
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = -3
Query: 323 EDVKMKDKLFEV--KVSQYHAECSCKKFVMCGILCRHAFFALNQFEVVKIPRNLVLNRWS 150
++ K+ L EV +S ++A CSCK F GI CRH + ++ +IP +LNRW+
Sbjct: 464 DNSKVNRNLREVVYNLSYHNANCSCKMFQAEGIPCRHILCVVKGKKLNEIPSKYILNRWT 523
Query: 149 RIAEHSHSSKFPGVSDAFGKVENVSLKVTNIWFNFQKTMNKAGVDMEKL 3
+ A + + D + V+N+W + + KAG D EKL
Sbjct: 524 KFA---NKKPVFDIGDIVYEKAGQGGIVSNVWDKLFRCVEKAGQDKEKL 569
>ref|XP_003603917.1| FAR1-related protein [Medicago truncatula]
gi|355492965|gb|AES74168.1| FAR1-related protein
[Medicago truncatula]
Length = 308
Score = 70.1 bits (170), Expect(2) = 1e-20
Identities = 40/112 (35%), Positives = 61/112 (54%)
Frame = -1
Query: 661 MFGLMRTTSRSESENNFFSQFHRHSDTLCEFYLRFESAMDKQRHESARLTEEGRSAIPST 482
M G++RTTSRSESEN+F+ F + L EF++RF+SA++ QRH+ + P
Sbjct: 1 MAGILRTTSRSESENSFYGNFLNPNVNLVEFWMRFDSAIEAQRHKELLADNNSIHSKPKL 60
Query: 481 VSTLFLEADAAQLYTRPIFYKVQVEILASCYDMRIVDMGPLVDGIKTYQMKD 326
+E A +YTR FY Q E+ +C D I + DG++ + + D
Sbjct: 61 KLERGIERHARDVYTRENFYIFQHELWIACVDCGIENKKD-EDGMEIFHIYD 111
Score = 55.8 bits (133), Expect(2) = 1e-20
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = -3
Query: 323 EDVKMKDKLFEV--KVSQYHAECSCKKFVMCGILCRHAFFALNQFEVVKIPRNLVLNRWS 150
++ ++ KL EV +S ++A CSCK F GI CRH L +IP ++NRW+
Sbjct: 111 DNSEINGKLREVVYNLSDHNANCSCKMFQAEGIPCRHILCVLKGKNFNEIPSKHIVNRWT 170
Query: 149 RIAEHSHSSKFPGVSDAFGKVENVSLKVTNIWFNFQKTMNKAGVDMEKL 3
+ A ++ P A E S ++++W + + KAG D E+L
Sbjct: 171 KFA-----NRTPIFDIADNVFEEDSKLISDVWNHLHSCVEKAGKDKERL 214
>gb|AAF66982.1| transposase [Zea mays]
Length = 709
Score = 76.6 bits (187), Expect(2) = 2e-18
Identities = 38/96 (39%), Positives = 59/96 (61%)
Frame = -1
Query: 682 AFFRDKPMFGLMRTTSRSESENNFFSQFHRHSDTLCEFYLRFESAMDKQRHESARLTEEG 503
AFF D P+ G++RTTSRSES N+FF++F EF+LRF++A+++QRHE +
Sbjct: 402 AFFMDTPLAGVLRTTSRSESANSFFNRFIHRKLCFVEFWLRFDTALERQRHEELKADHIS 461
Query: 502 RSAIPSTVSTLFLEADAAQLYTRPIFYKVQVEILAS 395
+ P + +E A+ LYT +F Q E++A+
Sbjct: 462 IHSTPVLRTPWVVEKQASILYTHKVFKIFQEEVIAA 497
Score = 42.0 bits (97), Expect(2) = 2e-18
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -3
Query: 320 DVKMKDKLFEVKVSQYHAECSCKKFVMCGILCRHAFFALNQFEVVKIPRNLVLNRW 153
D M+D++ + S CSCK F GI C H A+ ++ ++P + +L RW
Sbjct: 519 DGSMRDRVVQWCTSNIFGRCSCKLFEKIGIPCCHIILAMRGEKLYELPSSYILKRW 574
>ref|XP_002467387.1| hypothetical protein SORBIDRAFT_01g026910 [Sorghum bicolor]
gi|241921241|gb|EER94385.1| hypothetical protein
SORBIDRAFT_01g026910 [Sorghum bicolor]
Length = 558
Score = 71.6 bits (174), Expect(2) = 8e-17
Identities = 36/94 (38%), Positives = 55/94 (58%)
Frame = -1
Query: 676 FRDKPMFGLMRTTSRSESENNFFSQFHRHSDTLCEFYLRFESAMDKQRHESARLTEEGRS 497
F D P+ G++RTTSRSES N+FF++F EF+LRF++A++ QR E
Sbjct: 384 FLDIPLAGMLRTTSRSESANSFFNRFIHRKLAFVEFWLRFDTALECQRQEELLADNTSLH 443
Query: 496 AIPSTVSTLFLEADAAQLYTRPIFYKVQVEILAS 395
+ P + +E + LYT +F+K Q +ILA+
Sbjct: 444 STPKLMIPWGIEKQCSVLYTHEVFFKFQEQILAA 477
Score = 41.2 bits (95), Expect(2) = 8e-17
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Frame = -3
Query: 326 CEDVKM--------KDKLFEVKVSQYHAECSCKKFVMCGILCRHAFFALNQFEVVKIPRN 171
CED+K K+++ ++ S CSCK + GI CRH L + ++P
Sbjct: 489 CEDIKYFTINSQSGKERVVQMNKSNMFGTCSCKLYESYGIPCRHIIQVLRAEKQNEVPST 548
Query: 170 LVLNRWSR 147
++ RW +
Sbjct: 549 YIMKRWEK 556