BLASTX nr result

ID: Cnidium21_contig00017190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017190
         (1580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|...   547   e-153
ref|XP_002300832.1| f-box family protein [Populus trichocarpa] g...   545   e-152
ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   545   e-152
ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...   542   e-152
gb|ACU17996.1| unknown [Glycine max]                                  529   e-148

>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|223535945|gb|EEF37604.1|
            Protein AFR, putative [Ricinus communis]
          Length = 345

 Score =  547 bits (1409), Expect = e-153
 Identities = 260/345 (75%), Positives = 291/345 (84%)
 Frame = -3

Query: 1245 MSELIEGLPDAVALRCLARVPFYLHPKLELVSRSWRAVVHSAELFKTRQEVKSTEDFLCV 1066
            MSELIEGLPDA+A+RC+ARVPFYLHPKLELVS SWR+ + S ELFK RQEV S ED LCV
Sbjct: 1    MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 1065 CAYDPENLWQLYDPLRDLWITLPVLPSQVRHLAYFGAVSTAGKLFVLGGGSDAVDPLTGD 886
            CA++PENLWQLYDPLRDLWITLPVLPS++RHLA+FG VSTAGKL+VLGGGSDAVDPLTGD
Sbjct: 61   CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGD 120

Query: 885  HDGSFATDDVWSYDPVTRQWAMCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 706
             DG+FAT++VWSYDPV RQWA+ ASMLVPRAMFACCVL GKIVVAGGFTSCRKSISQAE+
Sbjct: 121  QDGNFATNEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEM 180

Query: 705  YDPEKNVWASIPDLQRAHNTACTGVVIGGKMHVLHKGLSTVQIYDKERQGWIVYDCLSLQ 526
            YDPEK+VW  IPDL R HN+AC+G+VIGGK+H+LHKGLS VQ+ D    GW V D   LQ
Sbjct: 181  YDPEKDVWIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNWLQ 240

Query: 525  GPMAVVKGEVYVMSHGLIQKQVGEETKVVVSASEFRRRIGFAMTXXXXXXXXXXXXXGPE 346
            GPMAVV G +YVMSHGLI KQ G+  KVVVSASEFRRRIGFAMT             GP+
Sbjct: 241  GPMAVVHGALYVMSHGLICKQEGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGVIGPD 300

Query: 345  QWNWDIKKVSDVDVLTLGSERPVWRQATPMSRCRGTVFGCTQLRI 211
            +WNWDIK +SDVD+L +G ERP WRQA PMSRCRGT+ GC QLRI
Sbjct: 301  RWNWDIKPMSDVDILAVGGERPTWRQAAPMSRCRGTILGCAQLRI 345


>ref|XP_002300832.1| f-box family protein [Populus trichocarpa]
            gi|222842558|gb|EEE80105.1| f-box family protein [Populus
            trichocarpa]
          Length = 345

 Score =  545 bits (1405), Expect = e-152
 Identities = 261/345 (75%), Positives = 292/345 (84%)
 Frame = -3

Query: 1245 MSELIEGLPDAVALRCLARVPFYLHPKLELVSRSWRAVVHSAELFKTRQEVKSTEDFLCV 1066
            MSELIEGLPDAVA+RC+ARVPFYLHPKLE+VSRSW+A V S ELFK RQEV S ED LCV
Sbjct: 1    MSELIEGLPDAVAIRCIARVPFYLHPKLEVVSRSWQAAVRSTELFKARQEVGSAEDLLCV 60

Query: 1065 CAYDPENLWQLYDPLRDLWITLPVLPSQVRHLAYFGAVSTAGKLFVLGGGSDAVDPLTGD 886
            CA+DPENLWQLYDPLRDLWITLP+LPS++RHLA+FG V +AGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPLRDLWITLPILPSKIRHLAHFGVVCSAGKLFVLGGGSDAVDPLTGD 120

Query: 885  HDGSFATDDVWSYDPVTRQWAMCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 706
             DGSFAT++VWSYDPV R+WA  ASMLVPRAMFACC L+GKIVVAGGFTSC+KSISQAE+
Sbjct: 121  QDGSFATNEVWSYDPVLREWAARASMLVPRAMFACCALNGKIVVAGGFTSCQKSISQAEM 180

Query: 705  YDPEKNVWASIPDLQRAHNTACTGVVIGGKMHVLHKGLSTVQIYDKERQGWIVYDCLSLQ 526
            YDPEK+VW  IPDL R HN+AC+GVVIGGK+HVLH+GLSTVQ+ D    GW V D   LQ
Sbjct: 181  YDPEKDVWVPIPDLHRTHNSACSGVVIGGKLHVLHRGLSTVQVLDSIGSGWTVEDYGWLQ 240

Query: 525  GPMAVVKGEVYVMSHGLIQKQVGEETKVVVSASEFRRRIGFAMTXXXXXXXXXXXXXGPE 346
            GPMAVV   +YVMSHGLI KQ G+  KVVVSASEFR+RIGFAMT             GP+
Sbjct: 241  GPMAVVHDALYVMSHGLIVKQEGKTRKVVVSASEFRKRIGFAMTGLGDEMYVIGGVIGPD 300

Query: 345  QWNWDIKKVSDVDVLTLGSERPVWRQATPMSRCRGTVFGCTQLRI 211
            +WNWDIK VSDVD+LT+G ERP WRQATPM+RCRGT+ GC QLRI
Sbjct: 301  RWNWDIKPVSDVDILTVGGERPTWRQATPMTRCRGTIRGCAQLRI 345


>ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Vitis
            vinifera] gi|359479635|ref|XP_003632310.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 2 [Vitis
            vinifera] gi|359479637|ref|XP_003632311.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 3 [Vitis
            vinifera]
          Length = 345

 Score =  545 bits (1403), Expect = e-152
 Identities = 263/345 (76%), Positives = 293/345 (84%)
 Frame = -3

Query: 1245 MSELIEGLPDAVALRCLARVPFYLHPKLELVSRSWRAVVHSAELFKTRQEVKSTEDFLCV 1066
            MS LIEGLPDAVALRCLA VPFYLHP+LELVSRSWR  +   ELFK RQEV S+ED LCV
Sbjct: 1    MSGLIEGLPDAVALRCLAWVPFYLHPRLELVSRSWRDAIRGPELFKARQEVGSSEDLLCV 60

Query: 1065 CAYDPENLWQLYDPLRDLWITLPVLPSQVRHLAYFGAVSTAGKLFVLGGGSDAVDPLTGD 886
            CA+DPENLWQLYDP +DLWI+LPVLPS++RHLA+FGAVSTAGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPRKDLWISLPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120

Query: 885  HDGSFATDDVWSYDPVTRQWAMCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 706
             DGSFAT++VWSYDP+ RQWA  A MLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI
Sbjct: 121  QDGSFATNEVWSYDPIIRQWAPRAPMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 180

Query: 705  YDPEKNVWASIPDLQRAHNTACTGVVIGGKMHVLHKGLSTVQIYDKERQGWIVYDCLSLQ 526
            YDPEK+ W SIPDL R HN+AC+GVV+ GK+HVLHKGL+TVQI DK   GW V D   LQ
Sbjct: 181  YDPEKDAWVSIPDLHRTHNSACSGVVLDGKVHVLHKGLTTVQILDKVGPGWRVEDYGWLQ 240

Query: 525  GPMAVVKGEVYVMSHGLIQKQVGEETKVVVSASEFRRRIGFAMTXXXXXXXXXXXXXGPE 346
            GPMA+V+G +YVMSHG+I KQ  E  K+VVSASEFRRRIGFAMT             GP+
Sbjct: 241  GPMAIVQGALYVMSHGIIFKQEREVKKMVVSASEFRRRIGFAMTGLRDEIYVIGGVIGPD 300

Query: 345  QWNWDIKKVSDVDVLTLGSERPVWRQATPMSRCRGTVFGCTQLRI 211
            +WNWDIK +SDVDVLT+GSERP WRQ +PMS+CRGT+FGCTQLRI
Sbjct: 301  RWNWDIKPLSDVDVLTIGSERPAWRQVSPMSQCRGTIFGCTQLRI 345


>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
            gi|118482816|gb|ABK93324.1| unknown [Populus trichocarpa]
            gi|222857044|gb|EEE94591.1| f-box family protein [Populus
            trichocarpa]
          Length = 345

 Score =  542 bits (1397), Expect = e-152
 Identities = 262/345 (75%), Positives = 291/345 (84%)
 Frame = -3

Query: 1245 MSELIEGLPDAVALRCLARVPFYLHPKLELVSRSWRAVVHSAELFKTRQEVKSTEDFLCV 1066
            MSELIEGLPDAVA+RC+ARVPFYLHPKLELVSRSWRAVV S ELFK RQEV S ED LCV
Sbjct: 1    MSELIEGLPDAVAIRCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCV 60

Query: 1065 CAYDPENLWQLYDPLRDLWITLPVLPSQVRHLAYFGAVSTAGKLFVLGGGSDAVDPLTGD 886
            CA+DPENLWQLYDP RDLWITLPVLPS++RHLA+FG VS+AGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPHRDLWITLPVLPSKIRHLAHFGVVSSAGKLFVLGGGSDAVDPLTGD 120

Query: 885  HDGSFATDDVWSYDPVTRQWAMCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 706
             DGSFAT++VWSYDPV RQWA  ASMLVPRAMFAC  L+GKIVVAGGFTSCRKSISQAE+
Sbjct: 121  QDGSFATNEVWSYDPVLRQWAARASMLVPRAMFACGTLNGKIVVAGGFTSCRKSISQAEM 180

Query: 705  YDPEKNVWASIPDLQRAHNTACTGVVIGGKMHVLHKGLSTVQIYDKERQGWIVYDCLSLQ 526
            YDPEK+VW  IPDL R HN+ C+GVVIGGK+HVLH+GLSTVQ+ D    GW V D   LQ
Sbjct: 181  YDPEKDVWIPIPDLHRTHNSTCSGVVIGGKLHVLHRGLSTVQVLDNVGSGWTVEDYGWLQ 240

Query: 525  GPMAVVKGEVYVMSHGLIQKQVGEETKVVVSASEFRRRIGFAMTXXXXXXXXXXXXXGPE 346
            GPMAVV   +YVMSHGLI KQ G+  KVVVSASEFR+RIGFAM              GP+
Sbjct: 241  GPMAVVHDALYVMSHGLIFKQEGKTRKVVVSASEFRKRIGFAMMGLGDDIYVIGGVIGPD 300

Query: 345  QWNWDIKKVSDVDVLTLGSERPVWRQATPMSRCRGTVFGCTQLRI 211
            +WNWDI+ +SDVD+LT+G +RP WRQATPM+RCRGT+ GCTQLRI
Sbjct: 301  RWNWDIRPMSDVDILTVGGDRPTWRQATPMTRCRGTILGCTQLRI 345


>gb|ACU17996.1| unknown [Glycine max]
          Length = 345

 Score =  529 bits (1363), Expect = e-148
 Identities = 256/345 (74%), Positives = 287/345 (83%)
 Frame = -3

Query: 1245 MSELIEGLPDAVALRCLARVPFYLHPKLELVSRSWRAVVHSAELFKTRQEVKSTEDFLCV 1066
            MS LIE LPDAVA+RCLARVPFY HP LELVSRSW+A + S ELFK RQEV STED LCV
Sbjct: 1    MSGLIERLPDAVAIRCLARVPFYFHPVLELVSRSWQAAIRSPELFKARQEVGSTEDLLCV 60

Query: 1065 CAYDPENLWQLYDPLRDLWITLPVLPSQVRHLAYFGAVSTAGKLFVLGGGSDAVDPLTGD 886
            CA+DPENLWQLYDP+RDLWITLPVLPS++RHL+ FGAVSTAGKLFV+GGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPMRDLWITLPVLPSKIRHLSNFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 885  HDGSFATDDVWSYDPVTRQWAMCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 706
             DG FATD+VWSYDPV RQWA  ASMLVPR+MFACCVL+GKIVVAGGFTSCRKSISQAE+
Sbjct: 121  QDGCFATDEVWSYDPVVRQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKSISQAEM 180

Query: 705  YDPEKNVWASIPDLQRAHNTACTGVVIGGKMHVLHKGLSTVQIYDKERQGWIVYDCLSLQ 526
            YDP+K+VW  +PDL R HN+AC+GVVIGGK++VLHK LSTVQ+ D    GW V +C+ LQ
Sbjct: 181  YDPDKDVWIPMPDLHRTHNSACSGVVIGGKVYVLHKDLSTVQVLDNAGPGWTVEECVWLQ 240

Query: 525  GPMAVVKGEVYVMSHGLIQKQVGEETKVVVSASEFRRRIGFAMTXXXXXXXXXXXXXGPE 346
            G MAVV   +YVMSHGLI KQ  EE KVV SASEFR+RIGFAMT             GP+
Sbjct: 241  GQMAVVGDALYVMSHGLIFKQDKEERKVVGSASEFRKRIGFAMTGLGDDLYVIGGFIGPD 300

Query: 345  QWNWDIKKVSDVDVLTLGSERPVWRQATPMSRCRGTVFGCTQLRI 211
            +WNWDIK +S+VDVLTLGSERP WRQA PM+RC G + GCT LRI
Sbjct: 301  RWNWDIKPLSEVDVLTLGSERPTWRQAAPMTRCHGPILGCTLLRI 345


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