BLASTX nr result

ID: Cnidium21_contig00017177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017177
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...   430   e-118
ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-co...   429   e-118
ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu...   429   e-118
emb|CBI21155.3| unnamed protein product [Vitis vinifera]              427   e-118
emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera]   427   e-118

>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
            [Glycine max]
          Length = 971

 Score =  430 bits (1106), Expect = e-118
 Identities = 214/256 (83%), Positives = 224/256 (87%)
 Frame = +2

Query: 2    YELKIGWGKSVXXXXXXXXXXXXGHMAIRSKEGATVILXXXXXXXXXXXXXQNSELVLTP 181
            YELKIGWGKSV            GHMAIRSKEG+TVIL             QNSELVLTP
Sbjct: 258  YELKIGWGKSVALPSQALPAPPPGHMAIRSKEGSTVILSGPSGPPVTTVPNQNSELVLTP 317

Query: 182  NVPDITVTLPEDDHLRHVIDTMALYILDGGCAFEQAIMERGRGNPLFSFLFELGSKEHTY 361
            NVPDI VT PEDDHLRHVIDTMALY+LDGGCAFEQAIMERGRGNPLF+FLF LGSKEHTY
Sbjct: 318  NVPDIMVTPPEDDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNPLFNFLFVLGSKEHTY 377

Query: 362  YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPALPIAKSPEHEKESGSTYAAGRSRRI 541
            YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPP LP++KSPEHEKE G T+A GRSRR+
Sbjct: 378  YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPPLPMSKSPEHEKEPGPTHAGGRSRRV 437

Query: 542  EPERTLTDAQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPI 721
            EPERTLTDAQRDEFEDMLRALTLERSQIKEAMGF+LDNADAAGE+VEVLTESLTLKETPI
Sbjct: 438  EPERTLTDAQRDEFEDMLRALTLERSQIKEAMGFSLDNADAAGEVVEVLTESLTLKETPI 497

Query: 722  PTKVARLMLVSDILHN 769
            PTK+ARLMLVSDILHN
Sbjct: 498  PTKIARLMLVSDILHN 513


>ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
            [Glycine max]
          Length = 972

 Score =  429 bits (1104), Expect = e-118
 Identities = 214/256 (83%), Positives = 226/256 (88%)
 Frame = +2

Query: 2    YELKIGWGKSVXXXXXXXXXXXXGHMAIRSKEGATVILXXXXXXXXXXXXXQNSELVLTP 181
            YELKIGWGKSV            GHMAIRSKEG+TVIL             QNSELVLTP
Sbjct: 259  YELKIGWGKSVALPSQALPAPPPGHMAIRSKEGSTVILSGPSGPPVTSVPNQNSELVLTP 318

Query: 182  NVPDITVTLPEDDHLRHVIDTMALYILDGGCAFEQAIMERGRGNPLFSFLFELGSKEHTY 361
            NVPDI VT PED+HLRHVIDTMAL++LDGGCAFEQAIMERGRGNPLF+FLF LGSKEHTY
Sbjct: 319  NVPDIMVTPPEDEHLRHVIDTMALHVLDGGCAFEQAIMERGRGNPLFNFLFILGSKEHTY 378

Query: 362  YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPALPIAKSPEHEKESGSTYAAGRSRRI 541
            YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPP LP++KSPEHEKESGST+A GRSRR+
Sbjct: 379  YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPQLPMSKSPEHEKESGSTHAGGRSRRV 438

Query: 542  EPERTLTDAQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPI 721
            EP+RTLTDAQRDEFEDMLRALTLERSQIKEAMGF+LDNADAAGEIVEVLTESLTLKETPI
Sbjct: 439  EPDRTLTDAQRDEFEDMLRALTLERSQIKEAMGFSLDNADAAGEIVEVLTESLTLKETPI 498

Query: 722  PTKVARLMLVSDILHN 769
            PTK+ARLMLVSDILHN
Sbjct: 499  PTKIARLMLVSDILHN 514


>ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
            gi|223545356|gb|EEF46861.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 979

 Score =  429 bits (1103), Expect = e-118
 Identities = 214/256 (83%), Positives = 224/256 (87%)
 Frame = +2

Query: 2    YELKIGWGKSVXXXXXXXXXXXXGHMAIRSKEGATVILXXXXXXXXXXXXXQNSELVLTP 181
            YELKIGWGKSV            GHMAIRSKEGATVIL              NSELVLTP
Sbjct: 257  YELKIGWGKSVALPSQALPAPPPGHMAIRSKEGATVILSGPSGPPVTSVPNHNSELVLTP 316

Query: 182  NVPDITVTLPEDDHLRHVIDTMALYILDGGCAFEQAIMERGRGNPLFSFLFELGSKEHTY 361
            NVPDI V  P+DDHLRHVIDTMALY+LDGGCAFEQAIMERGRGN LF+FLFELGSKEHTY
Sbjct: 317  NVPDIMVVPPDDDHLRHVIDTMALYVLDGGCAFEQAIMERGRGNSLFNFLFELGSKEHTY 376

Query: 362  YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPALPIAKSPEHEKESGSTYAAGRSRRI 541
            YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPP+LP AKSPEHEKESG+TYAAG+SRR+
Sbjct: 377  YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPSLPTAKSPEHEKESGNTYAAGKSRRV 436

Query: 542  EPERTLTDAQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPI 721
            +PERTLTD QRDEFEDMLRALTLERSQIK+AMGFALDNADAAGEIVEVLTESLTLKETPI
Sbjct: 437  DPERTLTDPQRDEFEDMLRALTLERSQIKDAMGFALDNADAAGEIVEVLTESLTLKETPI 496

Query: 722  PTKVARLMLVSDILHN 769
            PTKVAR+MLVSDILHN
Sbjct: 497  PTKVARIMLVSDILHN 512


>emb|CBI21155.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score =  427 bits (1099), Expect = e-118
 Identities = 214/256 (83%), Positives = 223/256 (87%)
 Frame = +2

Query: 2    YELKIGWGKSVXXXXXXXXXXXXGHMAIRSKEGATVILXXXXXXXXXXXXXQNSELVLTP 181
            YELKIGWGKSV            GHMAIRSKEGATVIL             QNSELVLTP
Sbjct: 259  YELKIGWGKSVSLPSQALPAPPPGHMAIRSKEGATVILSGPSGPPVTSVPNQNSELVLTP 318

Query: 182  NVPDITVTLPEDDHLRHVIDTMALYILDGGCAFEQAIMERGRGNPLFSFLFELGSKEHTY 361
            NVPDI V+ PEDDHL HVIDTMALY+LDGGCAFEQAIMERGRGNPLF+FLFELGSKEHTY
Sbjct: 319  NVPDIMVSPPEDDHLHHVIDTMALYVLDGGCAFEQAIMERGRGNPLFNFLFELGSKEHTY 378

Query: 362  YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPALPIAKSPEHEKESGSTYAAGRSRRI 541
            YVWRLYSFAQGDTLQRWRTEPFIMITGSGRW+PP LP  +SPEHEKESG+T+AAGRSRR+
Sbjct: 379  YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWMPPPLPTVRSPEHEKESGTTFAAGRSRRV 438

Query: 542  EPERTLTDAQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPI 721
            E ERTLTD QRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPI
Sbjct: 439  ELERTLTDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPI 498

Query: 722  PTKVARLMLVSDILHN 769
            PTKVARLMLVSD+LHN
Sbjct: 499  PTKVARLMLVSDVLHN 514


>emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera]
          Length = 1384

 Score =  427 bits (1099), Expect = e-118
 Identities = 214/256 (83%), Positives = 223/256 (87%)
 Frame = +2

Query: 2    YELKIGWGKSVXXXXXXXXXXXXGHMAIRSKEGATVILXXXXXXXXXXXXXQNSELVLTP 181
            YELKIGWGKSV            GHMAIRSKEGATVIL             QNSELVLTP
Sbjct: 419  YELKIGWGKSVSLPSQALPAPPPGHMAIRSKEGATVILSGPSGPPVTSVPNQNSELVLTP 478

Query: 182  NVPDITVTLPEDDHLRHVIDTMALYILDGGCAFEQAIMERGRGNPLFSFLFELGSKEHTY 361
            NVPDI V+ PEDDHL HVIDTMALY+LDGGCAFEQAIMERGRGNPLF+FLFELGSKEHTY
Sbjct: 479  NVPDIMVSPPEDDHLHHVIDTMALYVLDGGCAFEQAIMERGRGNPLFNFLFELGSKEHTY 538

Query: 362  YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWIPPALPIAKSPEHEKESGSTYAAGRSRRI 541
            YVWRLYSFAQGDTLQRWRTEPFIMITGSGRW+PP LP  +SPEHEKESG+T+AAGRSRR+
Sbjct: 539  YVWRLYSFAQGDTLQRWRTEPFIMITGSGRWMPPPLPTVRSPEHEKESGTTFAAGRSRRV 598

Query: 542  EPERTLTDAQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPI 721
            E ERTLTD QRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPI
Sbjct: 599  ELERTLTDPQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESLTLKETPI 658

Query: 722  PTKVARLMLVSDILHN 769
            PTKVARLMLVSD+LHN
Sbjct: 659  PTKVARLMLVSDVLHN 674


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