BLASTX nr result

ID: Cnidium21_contig00017167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017167
         (2285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-20
ref|XP_003531381.1| PREDICTED: uncharacterized GTP-binding prote...    99   4e-18
ref|XP_003525079.1| PREDICTED: uncharacterized GTP-binding prote...    99   4e-18
gb|ACJ85536.1| unknown [Medicago truncatula]                           99   4e-18
ref|XP_003630114.1| GTP-binding protein, putative [Medicago trun...    99   4e-18

>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
            predicted protein [Populus trichocarpa]
          Length = 381

 Score =  104 bits (260), Expect = 9e-20
 Identities = 106/395 (26%), Positives = 177/395 (44%), Gaps = 19/395 (4%)
 Frame = +3

Query: 483  KELLAQILVRLPVKYILRCRCLLKSLNHFIKSPVFVTLHLNYQKQQQQIIAANHNHNYPK 662
            ++L+ +IL +LP+K +LRC  L KS N  IKSP F+  HL      Q  I++    N   
Sbjct: 7    EDLIQEILYKLPIKSLLRCTSLCKSWNSLIKSPTFIFKHL------QHTISSTDRQN--- 57

Query: 663  YLFFFPFC---QDFNLTVRIDDVQCQEYCRLEFLPDFPGHAWFAL---SYGLVCASTIFL 824
             LF    C   ++   ++R+D+    E+ +L F P     ++F +   S GL+C + IF 
Sbjct: 58   -LFLLRLCSREREEQYSLRLDNQDFNEHMQLHF-PFKSSESYFHVIGSSNGLICLANIF- 114

Query: 825  VGPAFNRNIYLWNPLINKYKTLPNLPFPSRPIWPGWEALAFGFLPEINDYVVIHII--KP 998
               +   +  LWNPLI KY  +       R + P +  + FG+    NDY +I ++  + 
Sbjct: 115  --QSLIVSFILWNPLIQKYMIV-----KPRILGPVYSFVGFGYDSRANDYKLIRMVSFQK 167

Query: 999  CLLPHPHSVIIGVYSLNTNSWKKSSQDNVSISQICRNHDDVVFINGAAFWVGFNSDRQK- 1175
                  +   I +YSLN  SW+   Q    +           F+NG   W+ + +D+ + 
Sbjct: 168  SKFRSENFPEIALYSLNEGSWRGIRQTG-PLRYDTDQRVSSAFLNGVVHWIAYRADQHEG 226

Query: 1176 ---ILMCFDTRTDILSEISLPDSVAYL-PFVPVIHAFGQSI-----AYFIWEGKVFHFDM 1328
               +++ FD   +I  EI+LP  +A + P    +  + +S      A F+       F +
Sbjct: 227  VSNVVLGFDMSDEIFLEIALPSCLANVRPSCLSLMVYKESSISVCQASFL---SSVQFHI 283

Query: 1329 WVLKYDDHINEFTWEKKMCVTPCKHVG-KDVLGIRHNGDPILKKCKHLISYNLDSHQASR 1505
            WV+K    +   +W K +     +  G    LGIR     + KK   ++S +L+    S+
Sbjct: 284  WVMKEYGVVE--SWTKLVLTLAAQGEGVPRALGIRKEELLMEKKRGWIVSGDLE----SQ 337

Query: 1506 FVNSWERWTEDSPYNDVGESPYVIRPFVESLVMLN 1610
             V     W E         S   I  ++ESLV+L+
Sbjct: 338  LVRDLRIWGE--------PSRTFIGSYLESLVLLD 364


>ref|XP_003531381.1| PREDICTED: uncharacterized GTP-binding protein At5g64813-like
            [Glycine max]
          Length = 333

 Score = 99.4 bits (246), Expect = 4e-18
 Identities = 47/50 (94%), Positives = 47/50 (94%)
 Frame = +1

Query: 2095 SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQSWAVEIAANGTFSA 2244
            SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQ WA EIAA GTFSA
Sbjct: 91   SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEIAATGTFSA 140


>ref|XP_003525079.1| PREDICTED: uncharacterized GTP-binding protein At5g64813-like
            [Glycine max]
          Length = 336

 Score = 99.4 bits (246), Expect = 4e-18
 Identities = 47/50 (94%), Positives = 47/50 (94%)
 Frame = +1

Query: 2095 SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQSWAVEIAANGTFSA 2244
            SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQ WA EIAA GTFSA
Sbjct: 91   SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEIAATGTFSA 140


>gb|ACJ85536.1| unknown [Medicago truncatula]
          Length = 197

 Score = 99.4 bits (246), Expect = 4e-18
 Identities = 47/50 (94%), Positives = 47/50 (94%)
 Frame = +1

Query: 2095 SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQSWAVEIAANGTFSA 2244
            SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQ WA EIAA GTFSA
Sbjct: 91   SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEIAATGTFSA 140


>ref|XP_003630114.1| GTP-binding protein, putative [Medicago truncatula]
            gi|355524136|gb|AET04590.1| GTP-binding protein, putative
            [Medicago truncatula]
          Length = 342

 Score = 99.4 bits (246), Expect = 4e-18
 Identities = 47/50 (94%), Positives = 47/50 (94%)
 Frame = +1

Query: 2095 SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQSWAVEIAANGTFSA 2244
            SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQ WA EIAA GTFSA
Sbjct: 91   SGHERYKDCRSLFYSQINGVIFVHDLSQRRTKTSLQKWAAEIAATGTFSA 140


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