BLASTX nr result

ID: Cnidium21_contig00017160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017160
         (2032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...   412   e-112
ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...   389   e-105
ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|2...   386   e-104
ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...   385   e-104

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score =  412 bits (1060), Expect = e-112
 Identities = 200/287 (69%), Positives = 227/287 (79%), Gaps = 8/287 (2%)
 Frame = -2

Query: 1608 MAYQA--GPXXXXXXXXGFQYLNSPFGDTTLTKVFVGGLAWETKSETMRNYFEQFGEILE 1435
            MAYQ   GP        GFQ+LNSPFGDTT TKVFVGGLAWET+SETMR YFEQFGEILE
Sbjct: 1    MAYQPIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 1434 AVVINDKNTGRSKGYGFVTFRDPESAKRACVDPSPVIDSRRANCNLASLGRPRPALPIVV 1255
            AVVI DKNTGRSKGYGFVTFRDPESA+RAC+DP+P+ID RRANCNLASLGRPRP++    
Sbjct: 61   AVVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMS--Y 118

Query: 1254 GRYRSPSPYSGGMPASRGPYAGHFGYQQPYSYSLQQGFTYPQYGYATYGSEYVYPQGVYN 1075
            GR R  +PY G +PA+RG Y G+FGYQQP SYS QQGF YP YGYA YG EYVYPQGVYN
Sbjct: 119  GRLRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMYPSYGYAAYGPEYVYPQGVYN 178

Query: 1074 PYAGQQYLQMYGVPGTVNAAMYPY-HVGQNVTGGHGYTTLQGYALPGNQIVQLGGPTVNS 898
            PY GQQYLQ+YGVPGTVN A+YPY  +GQ +   HGYTT+QGYA+PG+Q +Q GG +VN+
Sbjct: 179  PYPGQQYLQIYGVPGTVNTAIYPYGQLGQTLPSSHGYTTVQGYAMPGHQFMQFGGSSVNA 238

Query: 897  ITTSSIQTFQ-----GVVSPVPARPQLIIPVHSPQFIQSGSSDQNAG 772
            I+TS I T Q     G+ +PVPA+PQ I+P HSPQFIQ    DQ  G
Sbjct: 239  ISTSPIPTIQAPYPTGIAAPVPAQPQFIVPAHSPQFIQGSGPDQTTG 285


>ref|XP_002300621.1| predicted protein [Populus trichocarpa] gi|222842347|gb|EEE79894.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  390 bits (1001), Expect = e-106
 Identities = 195/288 (67%), Positives = 218/288 (75%), Gaps = 9/288 (3%)
 Frame = -2

Query: 1608 MAYQA--GPXXXXXXXXGFQYLNSPFGDTTLTKVFVGGLAWETKSETMRNYFEQFGEILE 1435
            MAYQA  GP        GFQY+NSPFGDTT TKVFVGGLAWET+SETMR YFEQFG+ILE
Sbjct: 1    MAYQAVPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 1434 AVVINDKNTGRSKGYGFVTFRDPESAKRACVDPSPVIDSRRANCNLASLGRPRPALPIVV 1255
            AVVI DKNTGRSKGYGFVTFR+PE+A+RAC DP+P+ID RRANCNLASLGRPRP  P  V
Sbjct: 61   AVVITDKNTGRSKGYGFVTFREPEAARRACADPTPMIDGRRANCNLASLGRPRPPQP-YV 119

Query: 1254 GRYRSPSPYSGGMPASRGPYAGHFGYQQPYSYSLQQGFTYPQYGYATYGSEYVYPQGVYN 1075
            GR R   PY   +   RG YAG FGYQQP SY  QQG  Y  YGYA YG EYVY QGVYN
Sbjct: 120  GRLRPAPPYIASVQTPRGTYAGSFGYQQPVSYGYQQGLMYHPYGYAAYGPEYVYQQGVYN 179

Query: 1074 PY-AGQQYLQMYGVPGTVNAAMYPY-HVGQNVTGGHGYTTLQGYALPGNQIVQLGGPTVN 901
            PY AGQQYLQ+YGVPGTVN  MYPY   GQNV GGHGYTT+QGYA+PG+ I+Q GGP VN
Sbjct: 180  PYAAGQQYLQIYGVPGTVNTGMYPYGQFGQNVPGGHGYTTMQGYAVPGHHIMQFGGPGVN 239

Query: 900  SITTSSIQTFQ-----GVVSPVPARPQLIIPVHSPQFIQSGSSDQNAG 772
            ++TTS + T Q     G+ + VPA+ Q I+P  SPQ++ S  SDQ  G
Sbjct: 240  AMTTSPLPTIQAPYPTGIAAAVPAQQQFIVPAPSPQYMHSSGSDQTTG 287


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score =  389 bits (999), Expect = e-105
 Identities = 193/288 (67%), Positives = 216/288 (75%), Gaps = 9/288 (3%)
 Frame = -2

Query: 1608 MAYQA--GPXXXXXXXXGFQYLNSPFGDTTLTKVFVGGLAWETKSETMRNYFEQFGEILE 1435
            MAYQA  GP        GFQ LNSPFGDTT TKVFVGGLAWET+SETMR YF+QFGEILE
Sbjct: 1    MAYQAMQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILE 60

Query: 1434 AVVINDKNTGRSKGYGFVTFRDPESAKRACVDPSPVIDSRRANCNLASLGRPRPALPIVV 1255
            AVVI DKNTGRSKGYGFVTFRDPE+A+RAC DPSPVID RRANCNLASLGRPRP LP   
Sbjct: 61   AVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLP--Y 118

Query: 1254 GRYRSPSPYSGGMPASRGPYAGHFGYQQPYSYSLQQGFTYPQYGYATYGSEYVYPQGVYN 1075
            GR R  SPY G +  +RG Y G FGYQQP SYS QQG  YP YGY +YG EY+YPQ +YN
Sbjct: 119  GRIRPASPYVGSLQPARGAYVGGFGYQQPVSYSYQQGLVYPPYGYTSYGPEYIYPQSLYN 178

Query: 1074 PYAGQQYLQMYGVPGTVN-AAMYPY-HVGQNVTGGHGYTTLQGYALPGNQIVQLGGPTVN 901
            PY GQQYLQ+YGVPG VN   +YPY  VGQ +T GHGY+ +QGY +PG+QIV  GG  VN
Sbjct: 179  PYMGQQYLQIYGVPGAVNTTTIYPYGQVGQAITSGHGYSAMQGYTVPGHQIVPYGGSNVN 238

Query: 900  SITTSSIQTFQ-----GVVSPVPARPQLIIPVHSPQFIQSGSSDQNAG 772
            +ITTS +   Q     G+ +PVP +PQ I+P  SPQF+Q    DQ AG
Sbjct: 239  AITTSPMPAIQASYPSGIAAPVPGQPQFIVPAPSPQFMQGSGPDQTAG 286


>ref|XP_002307819.1| predicted protein [Populus trichocarpa] gi|222857268|gb|EEE94815.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  386 bits (992), Expect = e-104
 Identities = 192/288 (66%), Positives = 219/288 (76%), Gaps = 9/288 (3%)
 Frame = -2

Query: 1608 MAYQA--GPXXXXXXXXGFQYLNSPFGDTTLTKVFVGGLAWETKSETMRNYFEQFGEILE 1435
            MAYQA  GP        GFQY+NSPFGDTT TKVFVGGLAWET+SETMR YFEQFG+ILE
Sbjct: 1    MAYQAIPGPSSGSSSSSGFQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILE 60

Query: 1434 AVVINDKNTGRSKGYGFVTFRDPESAKRACVDPSPVIDSRRANCNLASLGRPRPALPIVV 1255
            AVVI DKNTGRSKGYGFVTFR+P++A+RAC DP+P+ID RRANCNLASLGRPRP LP   
Sbjct: 61   AVVITDKNTGRSKGYGFVTFREPDAARRACADPTPIIDGRRANCNLASLGRPRPPLP--Y 118

Query: 1254 GRYRSPSPYSGGMPASRGPYAGHFGYQQPYSYSLQQGFTYPQYGYATYGSEYVYPQGVYN 1075
            GR R  +PY   +   RG Y G FGYQQP SY  QQG  Y  YGYA YG EYVY QG YN
Sbjct: 119  GRPRPAAPYITSVQTPRGTYVGSFGYQQPVSYGYQQGLMYNPYGYAAYGPEYVYQQGAYN 178

Query: 1074 PYA-GQQYLQMYGVPGTVNAAMYPY-HVGQNVTGGHGYTTLQGYALPGNQIVQLGGPTVN 901
            PYA G QYLQ+YGVPGTVN+ MYPY  + QNV GGHGYT++ GYA+PG+QIVQ GGP+VN
Sbjct: 179  PYATGHQYLQIYGVPGTVNSGMYPYGQLSQNVPGGHGYTSMPGYAVPGHQIVQFGGPSVN 238

Query: 900  SITTSSIQTFQ-----GVVSPVPARPQLIIPVHSPQFIQSGSSDQNAG 772
            +ITTSS+ T Q     G+ + VPA+ Q I+P  SPQ++Q   SDQ  G
Sbjct: 239  AITTSSMPTIQAPYHTGIAAAVPAQSQFIVPAPSPQYMQGSGSDQTTG 286


>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
            max]
          Length = 293

 Score =  385 bits (988), Expect = e-104
 Identities = 191/293 (65%), Positives = 216/293 (73%), Gaps = 14/293 (4%)
 Frame = -2

Query: 1608 MAYQA--GPXXXXXXXXGFQYLNSPFGDTTLTKVFVGGLAWETKSETMRNYFEQFGEILE 1435
            MAYQA   P        GFQ LNSPFGDTT TKVFVGGLAWET+SETMR YF+QFGEILE
Sbjct: 1    MAYQAIQVPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFGEILE 60

Query: 1434 AVVINDKNTGRSKGYGFVTFRDPESAKRACVDPSPVIDSRRANCNLASLGRPRPALP--- 1264
            AVVI DKNTGRSKGYGFVTFRDPE+A+RAC DP+PVID RRANCNLASLGRPRP LP   
Sbjct: 61   AVVITDKNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYGI 120

Query: 1263 --IVVGRYRSPSPYSGGMPASRGPYAGHFGY-QQPYSYSLQQGFTYPQYGYATYGSEYVY 1093
               ++ R R  SPY G +  +RG Y G FGY QQP SYS QQG  YP YGY TYG EY+Y
Sbjct: 121  VLCLIRRIRPASPYVGSLQPARGAYVGGFGYQQQPVSYSYQQGLVYPPYGYTTYGPEYIY 180

Query: 1092 PQGVYNPYAGQQYLQMYGVPGTVNAAMYPY-HVGQNVTGGHGYTTLQGYALPGNQIVQLG 916
            PQ +YNPY GQQYLQ+YGVPG VN  +YPY  VGQ +  GHGY+ +QGY +PG+QIV  G
Sbjct: 181  PQSLYNPYMGQQYLQIYGVPGAVNTTVYPYGQVGQAIPSGHGYSAIQGYTVPGHQIVPYG 240

Query: 915  GPTVNSITTSSIQTFQ-----GVVSPVPARPQLIIPVHSPQFIQSGSSDQNAG 772
            G  VN+ITTS +   Q     G+ +PVP +PQ I+P HSPQF+Q    DQ AG
Sbjct: 241  GSNVNAITTSPMPAIQASYPSGIAAPVPGQPQFIVPAHSPQFMQGSGPDQTAG 293


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