BLASTX nr result

ID: Cnidium21_contig00017143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017143
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein ...    83   3e-14
emb|CBI35015.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|NP_186781.4| paired amphipathic helix protein Sin3-like 1 [A...    82   5e-14
ref|NP_001189789.1| paired amphipathic helix protein Sin3-like 1...    82   5e-14
ref|XP_004155336.1| PREDICTED: LOW QUALITY PROTEIN: paired amphi...    82   6e-14

>ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Vitis
            vinifera]
          Length = 1395

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
 Frame = +3

Query: 6    KYADPEKSPDICIAMEGVKVINGLECKMACTSSKVSYVLDTEDVFCRKRCKREQ--SSTL 179
            KY   +     C+AME V ++NGLECK+ACTSSK+SYVLDTED F R R KR +   S +
Sbjct: 1318 KYGGLDDLSATCLAMEDVHLVNGLECKIACTSSKISYVLDTEDYFFRTRWKRRKLTGSEV 1377

Query: 180  SDQDKRRLQKFHQFLTAS 233
            S ++  R+++FH+FL+AS
Sbjct: 1378 SQRNWARVERFHRFLSAS 1395


>emb|CBI35015.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
 Frame = +3

Query: 6    KYADPEKSPDICIAMEGVKVINGLECKMACTSSKVSYVLDTEDVFCRKRCKREQ--SSTL 179
            KY   +     C+AME V ++NGLECK+ACTSSK+SYVLDTED F R R KR +   S +
Sbjct: 1282 KYGGLDDLSATCLAMEDVHLVNGLECKIACTSSKISYVLDTEDYFFRTRWKRRKLTGSEV 1341

Query: 180  SDQDKRRLQKFHQFLTAS 233
            S ++  R+++FH+FL+AS
Sbjct: 1342 SQRNWARVERFHRFLSAS 1359


>ref|NP_186781.4| paired amphipathic helix protein Sin3-like 1 [Arabidopsis thaliana]
            gi|296439818|sp|Q9SRH9.2|SNL1_ARATH RecName: Full=Paired
            amphipathic helix protein Sin3-like 1
            gi|332640118|gb|AEE73639.1| paired amphipathic helix
            protein Sin3-like 1 [Arabidopsis thaliana]
          Length = 1372

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/66 (56%), Positives = 56/66 (84%)
 Frame = +3

Query: 33   DICIAMEGVKVINGLECKMACTSSKVSYVLDTEDVFCRKRCKREQSSTLSDQDKRRLQKF 212
            D+C AMEGV+V+NGLECKM+C+S K++YVLDTED F RK+ K++++  L  ++K R+++F
Sbjct: 1308 DLCKAMEGVEVVNGLECKMSCSSYKIAYVLDTEDYFHRKK-KKKKTEQLWQRNKVRVERF 1366

Query: 213  HQFLTA 230
            H+FL+A
Sbjct: 1367 HRFLSA 1372


>ref|NP_001189789.1| paired amphipathic helix protein Sin3-like 1 [Arabidopsis thaliana]
            gi|332640119|gb|AEE73640.1| paired amphipathic helix
            protein Sin3-like 1 [Arabidopsis thaliana]
          Length = 1360

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 37/66 (56%), Positives = 56/66 (84%)
 Frame = +3

Query: 33   DICIAMEGVKVINGLECKMACTSSKVSYVLDTEDVFCRKRCKREQSSTLSDQDKRRLQKF 212
            D+C AMEGV+V+NGLECKM+C+S K++YVLDTED F RK+ K++++  L  ++K R+++F
Sbjct: 1296 DLCKAMEGVEVVNGLECKMSCSSYKIAYVLDTEDYFHRKK-KKKKTEQLWQRNKVRVERF 1354

Query: 213  HQFLTA 230
            H+FL+A
Sbjct: 1355 HRFLSA 1360


>ref|XP_004155336.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
            Sin3-like 4-like [Cucumis sativus]
          Length = 1419

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 10/86 (11%)
 Frame = +3

Query: 6    KYADPEKSPDICIAMEGVKVINGLECKMACTSSKVSYVLDTEDVFCRKRCKRE------- 164
            KYA  +++   C AMEG+K++NGLECK+AC SSKVSYVLDTED   R+  KR+       
Sbjct: 1334 KYACGDENSAACHAMEGLKIVNGLECKIACNSSKVSYVLDTEDFLFRRNSKRKRLHGNNS 1393

Query: 165  ---QSSTLSDQDKRRLQKFHQFLTAS 233
               QS + S    RR+QKFH+ L  S
Sbjct: 1394 CHNQSRSSSGDSSRRVQKFHKLLENS 1419


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