BLASTX nr result

ID: Cnidium21_contig00017117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017117
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309824.1| predicted protein [Populus trichocarpa] gi|2...   213   5e-53
ref|XP_002282266.1| PREDICTED: vesicle transport protein GOT1A [...   213   5e-53
ref|XP_002327947.1| predicted protein [Populus trichocarpa] gi|2...   211   1e-52
ref|XP_002870918.1| hypothetical protein ARALYDRAFT_486933 [Arab...   211   2e-52
ref|NP_190511.1| Got1/Sft2-like vescicle transport-like protein ...   211   2e-52

>ref|XP_002309824.1| predicted protein [Populus trichocarpa] gi|222852727|gb|EEE90274.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score =  213 bits (541), Expect = 5e-53
 Identities = 102/140 (72%), Positives = 114/140 (81%)
 Frame = -2

Query: 692 MMSFEMNDRKKXXXXXXXXXXXXXXXXXXXXFDKGLIAMGNILFVSGVMLTIGLQSSLQF 513
           M+SFEMNDRKK                    FDKGL+AMGNILF+SGV LTIG +S++QF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFISGVSLTIGPKSTMQF 60

Query: 512 FMKRSNYKGTISFGAGFFLVVIGWPILGMILETYGFIILFSGFWPTLAVFVQKIPIIGWV 333
           FMKR N+KGTISFGAGFF VVIGWP++GMILE YGFI+LFSGFWPTLAVFVQ+IPI GWV
Sbjct: 61  FMKRQNFKGTISFGAGFFFVVIGWPVIGMILEAYGFIVLFSGFWPTLAVFVQRIPIFGWV 120

Query: 332 FQQPFIRSFFDRYRGKRVPV 273
           FQQPF+RSFFDRYRGKRVPV
Sbjct: 121 FQQPFVRSFFDRYRGKRVPV 140


>ref|XP_002282266.1| PREDICTED: vesicle transport protein GOT1A [Vitis vinifera]
           gi|297742166|emb|CBI33953.3| unnamed protein product
           [Vitis vinifera]
          Length = 140

 Score =  213 bits (541), Expect = 5e-53
 Identities = 101/140 (72%), Positives = 114/140 (81%)
 Frame = -2

Query: 692 MMSFEMNDRKKXXXXXXXXXXXXXXXXXXXXFDKGLIAMGNILFVSGVMLTIGLQSSLQF 513
           M+SFEMNDRKK                    FDKGL+AMGNILF+SGV LTIGL+S++QF
Sbjct: 1   MVSFEMNDRKKIGLGLTAFGVFFSFLGIVFLFDKGLLAMGNILFISGVTLTIGLKSTVQF 60

Query: 512 FMKRSNYKGTISFGAGFFLVVIGWPILGMILETYGFIILFSGFWPTLAVFVQKIPIIGWV 333
           FMKR NYKGTISFG GFF V+IGWPILGM+LE YGFI+LFSGFWPTLAVF+QKIP +GWV
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLEAYGFIVLFSGFWPTLAVFLQKIPFLGWV 120

Query: 332 FQQPFIRSFFDRYRGKRVPV 273
           FQQPF+RSFFD+YRGKRVPV
Sbjct: 121 FQQPFVRSFFDKYRGKRVPV 140


>ref|XP_002327947.1| predicted protein [Populus trichocarpa] gi|222837356|gb|EEE75735.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score =  211 bits (538), Expect = 1e-52
 Identities = 100/140 (71%), Positives = 114/140 (81%)
 Frame = -2

Query: 692 MMSFEMNDRKKXXXXXXXXXXXXXXXXXXXXFDKGLIAMGNILFVSGVMLTIGLQSSLQF 513
           M+SFE+NDRKK                    FDKG +AMGNILF+SGV LTIG +S++QF
Sbjct: 1   MVSFELNDRKKIGLGLTGFGIFFSFLGIVFFFDKGFLAMGNILFISGVSLTIGPKSTMQF 60

Query: 512 FMKRSNYKGTISFGAGFFLVVIGWPILGMILETYGFIILFSGFWPTLAVFVQKIPIIGWV 333
           FMKR N+KGTISFGAGFF VVIGWP++GMILE YGFI+LFSGFWPTLAVF+QKIPI+GWV
Sbjct: 61  FMKRQNFKGTISFGAGFFFVVIGWPVIGMILEAYGFIVLFSGFWPTLAVFIQKIPILGWV 120

Query: 332 FQQPFIRSFFDRYRGKRVPV 273
           FQQPF+RSFFDRYRGKRVPV
Sbjct: 121 FQQPFVRSFFDRYRGKRVPV 140


>ref|XP_002870918.1| hypothetical protein ARALYDRAFT_486933 [Arabidopsis lyrata subsp.
           lyrata] gi|297316755|gb|EFH47177.1| hypothetical protein
           ARALYDRAFT_486933 [Arabidopsis lyrata subsp. lyrata]
          Length = 140

 Score =  211 bits (537), Expect = 2e-52
 Identities = 100/140 (71%), Positives = 112/140 (80%)
 Frame = -2

Query: 692 MMSFEMNDRKKXXXXXXXXXXXXXXXXXXXXFDKGLIAMGNILFVSGVMLTIGLQSSLQF 513
           MMSFEMNDRKK                    FDKGL+AMGNILF+SGV LTIG +S++QF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 512 FMKRSNYKGTISFGAGFFLVVIGWPILGMILETYGFIILFSGFWPTLAVFVQKIPIIGWV 333
           FMKR NYKGTISFG GFF V+IGWPILGM+LETYGF +LFSGFWPTLAVF QKIPI+GW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPILGWI 120

Query: 332 FQQPFIRSFFDRYRGKRVPV 273
            QQP+IRSFFD+YRGKRVPV
Sbjct: 121 IQQPYIRSFFDKYRGKRVPV 140


>ref|NP_190511.1| Got1/Sft2-like vescicle transport-like protein [Arabidopsis
           thaliana] gi|15240976|ref|NP_195763.1| Got1/Sft2-like
           vescicle transport protein [Arabidopsis thaliana]
           gi|334187355|ref|NP_001190200.1| Got1/Sft2-like vescicle
           transport protein [Arabidopsis thaliana]
           gi|6561943|emb|CAB62447.1| putative protein [Arabidopsis
           thaliana] gi|7320721|emb|CAB81926.1| putative protein
           [Arabidopsis thaliana] gi|15028037|gb|AAK76549.1|
           unknown protein [Arabidopsis thaliana]
           gi|17065530|gb|AAL32919.1| Unknown protein [Arabidopsis
           thaliana] gi|20258895|gb|AAM14141.1| unknown protein
           [Arabidopsis thaliana] gi|21537222|gb|AAM61563.1|
           unknown [Arabidopsis thaliana]
           gi|30102848|gb|AAP21342.1| At3g49420 [Arabidopsis
           thaliana] gi|332002959|gb|AED90342.1| Got1/Sft2-like
           vescicle transport protein [Arabidopsis thaliana]
           gi|332002960|gb|AED90343.1| Got1/Sft2-like vescicle
           transport protein [Arabidopsis thaliana]
           gi|332645019|gb|AEE78540.1| Got1/Sft2-like vescicle
           transport-like protein [Arabidopsis thaliana]
          Length = 140

 Score =  211 bits (536), Expect = 2e-52
 Identities = 99/140 (70%), Positives = 112/140 (80%)
 Frame = -2

Query: 692 MMSFEMNDRKKXXXXXXXXXXXXXXXXXXXXFDKGLIAMGNILFVSGVMLTIGLQSSLQF 513
           MMSFEMNDRKK                    FDKGL+AMGNILF+SGV LTIG +S++QF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 512 FMKRSNYKGTISFGAGFFLVVIGWPILGMILETYGFIILFSGFWPTLAVFVQKIPIIGWV 333
           FMKR NYKGTISFG GFF V+IGWPILGM+LETYGF +LFSGFWPTLAVF QKIP++GW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 332 FQQPFIRSFFDRYRGKRVPV 273
            QQP+IRSFFD+YRGKRVPV
Sbjct: 121 IQQPYIRSFFDKYRGKRVPV 140


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