BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017107
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37872.1| unknown [Lotus japonicus]                              474   e-131
ref|XP_002263213.1| PREDICTED: probable replication factor C sub...   473   e-131
ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|2...   469   e-130
ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycin...   466   e-129
ref|NP_198126.1| replication factor C subunit 3/5 [Arabidopsis t...   461   e-127

>gb|AFK37872.1| unknown [Lotus japonicus]
          Length = 354

 Score =  474 bits (1219), Expect = e-131
 Identities = 236/315 (74%), Positives = 254/315 (80%)
 Frame = +1

Query: 1   KALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFGASXXXXXXX 180
           K LD+V+VH DVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG +       
Sbjct: 10  KTLDQVMVHDDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFGTAAEKVKVE 69

Query: 181 XXXXXXDAGXXXXXXXXXXXXXXHHVELNPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKK 360
                 DAG              HH+E++PSDAGFQDRY+VQEIIKEMAKNRPIDTKGKK
Sbjct: 70  NRTWKVDAGSRSIDLELTTLSSAHHIEMSPSDAGFQDRYVVQEIIKEMAKNRPIDTKGKK 129

Query: 361 GFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRINAP 540
           GFKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSRCLN+RINAP
Sbjct: 130 GFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNIRINAP 189

Query: 541 KEEEIVEVLEFIGKKEGLQLPFGFAARIAEKSNRSLRRAILSFETCRVQQYPFTNNQLIP 720
            EE+IVEV+EFIGKKEGLQ+P GFAARIAEKSNR+LRRAILSFETCRVQQYPFTN Q IP
Sbjct: 190 SEEQIVEVIEFIGKKEGLQIPSGFAARIAEKSNRNLRRAILSFETCRVQQYPFTNRQTIP 249

Query: 721 AMDWEAYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXXXXXXXXXXX 900
            MDWE Y+ EIASDIMKEQ+PKRLFQVRGK+YELL NCIPP                   
Sbjct: 250 PMDWEEYISEIASDIMKEQNPKRLFQVRGKLYELLINCIPPEMILKRLLFELLRKLDAEL 309

Query: 901 XXXVCHWAAYYEHRM 945
              VCHWAAYYEHRM
Sbjct: 310 KHEVCHWAAYYEHRM 324


>ref|XP_002263213.1| PREDICTED: probable replication factor C subunit 3 [Vitis vinifera]
           gi|296089274|emb|CBI39046.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  473 bits (1217), Expect = e-131
 Identities = 240/315 (76%), Positives = 250/315 (79%)
 Frame = +1

Query: 1   KALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFGASXXXXXXX 180
           K LD +IVH DVAQNLKKLVTEQDCPHLLFYGP GSGKKTLIMA+LRQMFG S       
Sbjct: 10  KTLDNLIVHDDVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMAILRQMFGPSADKVKVE 69

Query: 181 XXXXXXDAGXXXXXXXXXXXXXXHHVELNPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKK 360
                 DAG              HH+ELNP DAGFQDRYIVQEIIKEMAKNRPIDTKGKK
Sbjct: 70  NKTWKIDAGTRTIDLELTTLSSTHHMELNPGDAGFQDRYIVQEIIKEMAKNRPIDTKGKK 129

Query: 361 GFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRINAP 540
           GF+VLVLNEVD+LSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLN+RINAP
Sbjct: 130 GFRVLVLNEVDRLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNIRINAP 189

Query: 541 KEEEIVEVLEFIGKKEGLQLPFGFAARIAEKSNRSLRRAILSFETCRVQQYPFTNNQLIP 720
            EE+I +VLEFI KKEGLQLP GFA RIAEKSNRSLRRAILSFETCRVQQYPFTNNQ +P
Sbjct: 190 TEEQITKVLEFIAKKEGLQLPSGFATRIAEKSNRSLRRAILSFETCRVQQYPFTNNQAMP 249

Query: 721 AMDWEAYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXXXXXXXXXXX 900
            MDWE YV EIASDIMKEQSPKRLFQVRGK+YELL NCIPP                   
Sbjct: 250 PMDWEEYVSEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLLELLKKLDAEL 309

Query: 901 XXXVCHWAAYYEHRM 945
              VCHWAAYYEHRM
Sbjct: 310 KHEVCHWAAYYEHRM 324


>ref|XP_002325862.1| predicted protein [Populus trichocarpa] gi|222862737|gb|EEF00244.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  469 bits (1207), Expect = e-130
 Identities = 240/315 (76%), Positives = 256/315 (81%)
 Frame = +1

Query: 1   KALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFGASXXXXXXX 180
           K LD+VIVHQ++A+NLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQ+FG S       
Sbjct: 10  KTLDQVIVHQEIAENLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFGTSAEKVKVE 69

Query: 181 XXXXXXDAGXXXXXXXXXXXXXXHHVELNPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKK 360
                 DAG              +HVEL+PSD GFQDRYIVQEIIKEMAKNRPIDTKGKK
Sbjct: 70  NRTWKIDAGSRTIDLELTTLSSTNHVELSPSDVGFQDRYIVQEIIKEMAKNRPIDTKGKK 129

Query: 361 GFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRINAP 540
           G+KVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEA+RSRCLNVRINAP
Sbjct: 130 GYKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSRCLNVRINAP 189

Query: 541 KEEEIVEVLEFIGKKEGLQLPFGFAARIAEKSNRSLRRAILSFETCRVQQYPFTNNQLIP 720
           KEE+IV+VLEFIGKKEGLQLP GFAARIA+KSNRSLRRAILSFETCRVQQYPF++NQ IP
Sbjct: 190 KEEQIVKVLEFIGKKEGLQLPPGFAARIADKSNRSLRRAILSFETCRVQQYPFSSNQAIP 249

Query: 721 AMDWEAYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXXXXXXXXXXX 900
            MDWE YV EI SDIM+EQSPKRLFQVRGK+YELL NCIPP                   
Sbjct: 250 PMDWEEYVSEICSDIMREQSPKRLFQVRGKLYELLINCIPP-EIILKLLSELLKKLDEEL 308

Query: 901 XXXVCHWAAYYEHRM 945
              VCHWAAYYEHRM
Sbjct: 309 KHEVCHWAAYYEHRM 323


>ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycine max]
           gi|255645652|gb|ACU23320.1| unknown [Glycine max]
          Length = 354

 Score =  466 bits (1200), Expect = e-129
 Identities = 235/315 (74%), Positives = 252/315 (80%)
 Frame = +1

Query: 1   KALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFGASXXXXXXX 180
           K LD+V+VH D+A+NLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG         
Sbjct: 10  KTLDQVMVHTDIARNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFGPGAEKVKVD 69

Query: 181 XXXXXXDAGXXXXXXXXXXXXXXHHVELNPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKK 360
                 DAG              +H+E++PSDAGFQDRYIVQE+IKEMAKNRPIDTKGKK
Sbjct: 70  NRTWKVDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKNRPIDTKGKK 129

Query: 361 GFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRINAP 540
           GFKVLVLN+VDKLSREAQHSLRRTMEKYSA CRLILCCNSSS+VTEA+RSRCLNVRINAP
Sbjct: 130 GFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAP 189

Query: 541 KEEEIVEVLEFIGKKEGLQLPFGFAARIAEKSNRSLRRAILSFETCRVQQYPFTNNQLIP 720
            EE+IVEVLEFIGKKEGLQLP GFAARI EKSNR+LRRAILSFETCRVQQYPFTN Q IP
Sbjct: 190 SEEQIVEVLEFIGKKEGLQLPPGFAARIVEKSNRNLRRAILSFETCRVQQYPFTNKQTIP 249

Query: 721 AMDWEAYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXXXXXXXXXXX 900
            MDWE Y+ EIASDIMKEQSPKRLFQVRGK+YELL NCIPP                   
Sbjct: 250 PMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYELLRKLDAEL 309

Query: 901 XXXVCHWAAYYEHRM 945
              VCHWAAYYE+RM
Sbjct: 310 KHEVCHWAAYYEYRM 324


>ref|NP_198126.1| replication factor C subunit 3/5 [Arabidopsis thaliana]
           gi|18389268|gb|AAL67077.1| putative replication factor C
           [Arabidopsis thaliana] gi|20259637|gb|AAM14175.1|
           putative replication factor C [Arabidopsis thaliana]
           gi|332006337|gb|AED93720.1| replication factor C subunit
           3/5 [Arabidopsis thaliana]
          Length = 354

 Score =  461 bits (1186), Expect = e-127
 Identities = 233/315 (73%), Positives = 252/315 (80%)
 Frame = +1

Query: 1   KALDKVIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFGASXXXXXXX 180
           K+LDKVIVH+D+AQ LKKLV+EQDCPHLLFYGPSGSGKKTLIMALL+Q++GAS       
Sbjct: 10  KSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGASAEKVKVE 69

Query: 181 XXXXXXDAGXXXXXXXXXXXXXXHHVELNPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKK 360
                 DAG              +HVEL PSDAGFQDRYIVQEIIKEMAKNRPIDTKGKK
Sbjct: 70  NRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKNRPIDTKGKK 129

Query: 361 GFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRCLNVRINAP 540
           G+KVLVLNEVDKLSREAQHSLRRTMEKYS+SCRLILCCNSSSKVTEA++SRCLNVRINAP
Sbjct: 130 GYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSRCLNVRINAP 189

Query: 541 KEEEIVEVLEFIGKKEGLQLPFGFAARIAEKSNRSLRRAILSFETCRVQQYPFTNNQLIP 720
            +EEIV+VLEF+ KKE LQLP GFAARIAEKSNRSLRRAILS ETCRVQ YPFT NQ+I 
Sbjct: 190 SQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNYPFTGNQVIS 249

Query: 721 AMDWEAYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPXXXXXXXXXXXXXXXXXXX 900
            MDWE YV EIA+D+MKEQSPK+LFQVRGKVYELL NCIPP                   
Sbjct: 250 PMDWEEYVAEIATDMMKEQSPKKLFQVRGKVYELLVNCIPPEVILKRLLHELLKKLDSEL 309

Query: 901 XXXVCHWAAYYEHRM 945
              VCHWAAYYEHRM
Sbjct: 310 KLEVCHWAAYYEHRM 324