BLASTX nr result

ID: Cnidium21_contig00017036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017036
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA50609.1| ras-related GTP-binding protein [Nicotiana tabacum]   122   3e-38
ref|XP_002332129.1| predicted protein [Populus trichocarpa] gi|2...   119   1e-37
ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]...   120   3e-37
gb|ABK92976.1| unknown [Populus trichocarpa]                          122   2e-36
ref|XP_002321789.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-35

>emb|CAA50609.1| ras-related GTP-binding protein [Nicotiana tabacum]
          Length = 200

 Score =  122 bits (306), Expect(2) = 3e-38
 Identities = 62/76 (81%), Positives = 63/76 (82%)
 Frame = +2

Query: 2   TNQASFDRAKKWVQELQAQGNPNMVMALAGNXXXXXXXXXXXXEEAQIYAQENGLFFMET 181
           TNQASFDRAKKWVQELQAQGNPNMVMALAGN            EEAQ YAQENGLFFMET
Sbjct: 93  TNQASFDRAKKWVQELQAQGNPNMVMALAGNKADLLDARKVAAEEAQTYAQENGLFFMET 152

Query: 182 SAKTATNVNDIFYEIA 229
           SAKTA+NVNDIFYEIA
Sbjct: 153 SAKTASNVNDIFYEIA 168



 Score = 61.2 bits (147), Expect(2) = 3e-38
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = +3

Query: 306 IFYEIAKRLPRLQPAPKPSGMVLTDTPARTAVSTSCCT 419
           IFYEIA RLPRLQPA  PSGMVL D PA+T  S SCC+
Sbjct: 163 IFYEIANRLPRLQPAQNPSGMVLMDRPAQTPASASCCS 200


>ref|XP_002332129.1| predicted protein [Populus trichocarpa] gi|222875179|gb|EEF12310.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  119 bits (299), Expect(2) = 1e-37
 Identities = 60/77 (77%), Positives = 64/77 (83%)
 Frame = +2

Query: 2   TNQASFDRAKKWVQELQAQGNPNMVMALAGNXXXXXXXXXXXXEEAQIYAQENGLFFMET 181
           +NQASF+RAKKWVQELQAQGNPNMVMALAGN            EEAQ+YAQE GLFF+ET
Sbjct: 93  SNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQVYAQEYGLFFIET 152

Query: 182 SAKTATNVNDIFYEIAK 232
           SAKTATNVNDIFYEIAK
Sbjct: 153 SAKTATNVNDIFYEIAK 169



 Score = 62.0 bits (149), Expect(2) = 1e-37
 Identities = 27/38 (71%), Positives = 30/38 (78%)
 Frame = +3

Query: 306 IFYEIAKRLPRLQPAPKPSGMVLTDTPARTAVSTSCCT 419
           IFYEIAKRLPR+QPAP PSGMVL D P  +  S SCC+
Sbjct: 163 IFYEIAKRLPRVQPAPNPSGMVLMDRPTESTASASCCS 200


>ref|NP_199326.1| Ras-related protein RHA1 [Arabidopsis thaliana]
           gi|297794787|ref|XP_002865278.1| hypothetical protein
           ARALYDRAFT_494466 [Arabidopsis lyrata subsp. lyrata]
           gi|400976|sp|P31582.1|RAF2A_ARATH RecName:
           Full=Ras-related protein RABF2a; Short=AtRABF2a;
           AltName: Full=Ras-related protein Rab5A; Short=AtRab5A;
           AltName: Full=Ras-related protein Rha1
           gi|14488100|gb|AAK63870.1|AF389298_1 AT5g45130/K17O22_15
           [Arabidopsis thaliana] gi|16484|emb|CAA41863.1| RHA1
           [Arabidopsis thaliana] gi|397594|emb|CAA80534.1|
           GTP-binding protein [Arabidopsis thaliana]
           gi|9758988|dbj|BAB09498.1| ras-related GTP-binding
           protein RHA1 [Arabidopsis thaliana]
           gi|20453279|gb|AAM19878.1| AT5g45130/K17O22_15
           [Arabidopsis thaliana] gi|297311113|gb|EFH41537.1|
           hypothetical protein ARALYDRAFT_494466 [Arabidopsis
           lyrata subsp. lyrata] gi|332007825|gb|AED95208.1|
           Ras-related protein RHA1 [Arabidopsis thaliana]
          Length = 200

 Score =  120 bits (301), Expect(2) = 3e-37
 Identities = 61/77 (79%), Positives = 63/77 (81%)
 Frame = +2

Query: 2   TNQASFDRAKKWVQELQAQGNPNMVMALAGNXXXXXXXXXXXXEEAQIYAQENGLFFMET 181
           TNQASF+RAKKWVQELQAQGNPNMVMALAGN            EEA+IYAQEN LFFMET
Sbjct: 93  TNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQENSLFFMET 152

Query: 182 SAKTATNVNDIFYEIAK 232
           SAKTATNV DIFYEIAK
Sbjct: 153 SAKTATNVKDIFYEIAK 169



 Score = 59.7 bits (143), Expect(2) = 3e-37
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +3

Query: 306 IFYEIAKRLPRLQPAPKPSGMVLTDTPARTAVSTSCC 416
           IFYEIAKRLPR+QPA  P+GMVL + P  TAVS+SCC
Sbjct: 163 IFYEIAKRLPRVQPAENPTGMVLPNGPGATAVSSSCC 199


>gb|ABK92976.1| unknown [Populus trichocarpa]
          Length = 200

 Score =  122 bits (307), Expect(2) = 2e-36
 Identities = 61/77 (79%), Positives = 65/77 (84%)
 Frame = +2

Query: 2   TNQASFDRAKKWVQELQAQGNPNMVMALAGNXXXXXXXXXXXXEEAQIYAQENGLFFMET 181
           +NQASF+RAKKWVQELQAQGNPNMVMALAGN            EEAQ++AQENGLFFMET
Sbjct: 93  SNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVAAEEAQVFAQENGLFFMET 152

Query: 182 SAKTATNVNDIFYEIAK 232
           SAKTATNVNDIFYEIAK
Sbjct: 153 SAKTATNVNDIFYEIAK 169



 Score = 54.7 bits (130), Expect(2) = 2e-36
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 306 IFYEIAKRLPRLQPAPKPSGMVLTDTPARTAVSTSCCT 419
           IFYEIAKRL ++QPAP PSGMV+ D P     S +CC+
Sbjct: 163 IFYEIAKRLSQVQPAPNPSGMVIMDRPTERTASAACCS 200


>ref|XP_002321789.1| predicted protein [Populus trichocarpa] gi|222868785|gb|EEF05916.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  119 bits (297), Expect(2) = 3e-35
 Identities = 59/77 (76%), Positives = 63/77 (81%)
 Frame = +2

Query: 2   TNQASFDRAKKWVQELQAQGNPNMVMALAGNXXXXXXXXXXXXEEAQIYAQENGLFFMET 181
           +NQASF+RAKKWVQELQAQGNPNMVMALAGN            E  Q++AQENGLFFMET
Sbjct: 93  SNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVAAEATQVFAQENGLFFMET 152

Query: 182 SAKTATNVNDIFYEIAK 232
           SAKTATNVNDIFYEIAK
Sbjct: 153 SAKTATNVNDIFYEIAK 169



 Score = 54.7 bits (130), Expect(2) = 3e-35
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 306 IFYEIAKRLPRLQPAPKPSGMVLTDTPARTAVSTSCCT 419
           IFYEIAKRL ++QPAP PSGMV+ D P     S +CC+
Sbjct: 163 IFYEIAKRLSQVQPAPNPSGMVIMDRPTERTASAACCS 200


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