BLASTX nr result

ID: Cnidium21_contig00017015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00017015
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus c...    60   2e-07
ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus communis]
           gi|223539424|gb|EEF41014.1| hypothetical protein
           RCOM_0653450 [Ricinus communis]
          Length = 426

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 29/176 (16%)
 Frame = -2

Query: 443 RETVTMKKKKQYIHTTGDTKDEAR--------IDKWMEKNKARENIG--QKSAASHHR-E 297
           RET+  K            K+E +        I+KWME+  + E +   +KS A   +  
Sbjct: 38  RETMRKKHSSNGFKDGAAVKEERKTSLKKACMIEKWMEEKVSYEKVAIRRKSMADFDKIN 97

Query: 296 IDKKYVGLMNLMNXXXXXXXXXXXXXXXXXXXSN-YGVSSRSSSTTY---RPKPIRTSMD 129
             K +     L+N                    + YG+SSRSSST Y   RPKPIRTS  
Sbjct: 98  TRKDFTHRPVLLNSSSTSSESSSGGGFSSSESESVYGLSSRSSSTNYTMQRPKPIRTSAS 157

Query: 128 INKTSHV----------EKPSQES-DGAVKRSKLKALKIYRDL---KQPISPGAKL 3
                 +          +KP+ +  +G+  ++K KALKIY DL   KQPISPG +L
Sbjct: 158 ARPVDELGMYNHHHPTTQKPNNKHHEGSFVKTKSKALKIYGDLKKVKQPISPGGRL 213


>ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|222841575|gb|EEE79122.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 60/179 (33%), Positives = 81/179 (45%), Gaps = 36/179 (20%)
 Frame = -2

Query: 431 TMKKKKQYIHTTGDTKD--------EARIDKWMEKNKARENIG--QKSAASHHREIDKKY 282
           TM+KK    H     KD           IDKWMEK  + E +   +KS A    +  +K 
Sbjct: 53  TMRKK----HENNGIKDGEMTSLQRACMIDKWMEKKVSHEKVAVRRKSMADFENK-SRKD 107

Query: 281 VGLMNLMNXXXXXXXXXXXXXXXXXXXSNYGV-SSRSSSTTY---RPKPIRTSMDINKTS 114
           V  + L +                   S YGV SSRSS+T+Y   RPKPIRTS+      
Sbjct: 108 VDSVLLNSSSTSSESSCGGGFSSSESESIYGVNSSRSSTTSYTMQRPKPIRTSISARPEK 167

Query: 113 HVEK-----------------PSQES--DGAVKRSKLKALKIYRDL---KQPISPGAKL 3
           +  +                 P+Q++  +G+  ++K KALKIY DL   KQPISPG +L
Sbjct: 168 YQRREDHHQIDMYHNHERNYAPNQKAKHEGSFVKTKSKALKIYGDLKKVKQPISPGGRL 226


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