BLASTX nr result

ID: Cnidium21_contig00016992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016992
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890553.1| hypothetical protein ARALYDRAFT_472555 [Arab...    68   1e-09
ref|NP_173718.1| hydroxyproline-rich glycoprotein family protein...    65   5e-09
ref|XP_002315884.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|NP_565006.1| hydroxyproline-rich glycoprotein family protein...    62   7e-08
ref|XP_002311500.1| predicted protein [Populus trichocarpa] gi|2...    61   9e-08

>ref|XP_002890553.1| hypothetical protein ARALYDRAFT_472555 [Arabidopsis lyrata subsp.
           lyrata] gi|297336395|gb|EFH66812.1| hypothetical protein
           ARALYDRAFT_472555 [Arabidopsis lyrata subsp. lyrata]
          Length = 158

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
 Frame = +3

Query: 84  LLAFLVVINFVHFLKSSSSETECPYPCSPSQPTGSESAGTLSPPLLTAGSLYPPPA---- 251
           LL+   + + V+F   + SET CPYPC P+ P G    G  S P +T    YPPPA    
Sbjct: 10  LLSLFFIFSLVYFPYLAISETPCPYPCYPTPPIG----GGSSTPSMTQPPPYPPPAVNYP 65

Query: 252 -----------PGDLIPNSPSPP------DHVNSVTLPTPDSVVPWYPYYSKRP 362
                      P   IP+ PSPP         N    P PD+++P++PYY ++P
Sbjct: 66  SPAGNLPNYPPPVGNIPDYPSPPYGGGDGSGSNFYGPPPPDAILPYFPYYYRKP 119


>ref|NP_173718.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
           thaliana] gi|2462821|gb|AAB72156.1| hypothetical protein
           [Arabidopsis thaliana] gi|2829906|gb|AAC00614.1|
           Hypothetical protein [Arabidopsis thaliana]
           gi|38454056|gb|AAR20722.1| At1g23050 [Arabidopsis
           thaliana] gi|38603998|gb|AAR24742.1| At1g23050
           [Arabidopsis thaliana] gi|332192206|gb|AEE30327.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana]
          Length = 161

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
 Frame = +3

Query: 72  NQHTLL--AFLVVINFVHFLKSSSSETECPYPCSPSQPTGSESAG---TLSPPLLTAGSL 236
           N H LL    + V + V+F     S+T CPYPC P+ P G  S+    T  PP    G  
Sbjct: 4   NDHGLLFLTLIFVFSLVYFPYLVISDTPCPYPCYPTPPIGGGSSTPSMTQPPPYPPPGVN 63

Query: 237 YPPPA--------PGDLIPNSPSPP----DHVNSVTL--PTPDSVVPWYPYYSKRP 362
           YP PA        P   IPN PSPP    D   S     P P++++P++PYY ++P
Sbjct: 64  YPTPAGNLPNYPPPVGNIPNYPSPPYGGGDSSGSSFYGPPPPNAILPYFPYYFRKP 119


>ref|XP_002315884.1| predicted protein [Populus trichocarpa] gi|222864924|gb|EEF02055.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
 Frame = +3

Query: 129 SSSSETECPYPCSPSQPTGSESAGTL---SPPLLTAGSLYPP--PAPGDLIPNSPSPPDH 293
           ++S   ECPYPC P  PTG+ +       SPP  +AG+  PP  P+P   +P    PP  
Sbjct: 25  TTSDSGECPYPCYPP-PTGTGTPIVTTPPSPPSQSAGTFSPPLYPSPTGNLPYYYPPPFG 83

Query: 294 VNSVTLPTPDSVVPWYPYYSKRPXXXXXXXXXXXXXLATRTLVIGPPILLVFPFLFIHF 470
            N    P PD ++P++P+Y ++P             L   TL++G   ++ F FL++ F
Sbjct: 84  NNFNGPPPPDPILPYFPFYYRKP--PHQDDVSSATSLPRSTLMMGTSNIIAFAFLYLFF 140


>ref|NP_565006.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
           thaliana] gi|21536546|gb|AAM60878.1| unknown
           [Arabidopsis thaliana] gi|332197026|gb|AEE35147.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana]
          Length = 135

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
 Frame = +3

Query: 84  LLAFLVVINFVHFLKSSSSETECPYPCSPSQPTGSES---AGTLSPPLLTAGSLYPPPAP 254
           L++ L V + V F   + S+T CPYPC+P    G+ S   AG    P       YPPP+ 
Sbjct: 8   LISLLFVFSLVMFPFITISQTPCPYPCNPLPIAGTGSTQPAGYYPQPT----GYYPPPSS 63

Query: 255 GDLIPNSPSPPDHVNSVT-----LPTPDSVVPWYPYYSKRP 362
            + +PN PSPP +  + +      P PD ++P++P+Y ++P
Sbjct: 64  SN-VPNYPSPPYYGGNPSGGYNGPPPPDPILPYFPFYYRKP 103


>ref|XP_002311500.1| predicted protein [Populus trichocarpa] gi|222851320|gb|EEE88867.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
 Frame = +3

Query: 132 SSSETECPYPCSPSQPTGSESAGTL-----SPPLLTAGSLYPP--PAPGDLIPNSPSPPD 290
           ++S+  CPYPC P  PTG+    T+     SPP  +AGS  PP  P+P   +P  P PP 
Sbjct: 25  ATSDDVCPYPCYPP-PTGTGRTPTVLTTPPSPPSQSAGSYSPPGYPSPTGNLPFYPPPPF 83

Query: 291 HVNSVTLPTPDSVVPWYPYYSKRP 362
             N   L  PD ++P++P+Y ++P
Sbjct: 84  GNNLDGLSPPDPILPYFPFYYRKP 107


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