BLASTX nr result

ID: Cnidium21_contig00016928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016928
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513604.1| conserved hypothetical protein [Ricinus comm...   246   5e-63
gb|AAK55708.1|AF380627_1 AT5g53330/K19E1_13 [Arabidopsis thalian...   245   1e-62
ref|NP_568790.1| Ubiquitin-associated/translation elongation fac...   243   4e-62
ref|XP_002267522.1| PREDICTED: uncharacterized protein LOC100260...   243   7e-62
ref|XP_004145917.1| PREDICTED: uncharacterized protein LOC101219...   238   2e-60

>ref|XP_002513604.1| conserved hypothetical protein [Ricinus communis]
           gi|223547512|gb|EEF49007.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 222

 Score =  246 bits (629), Expect = 5e-63
 Identities = 137/225 (60%), Positives = 158/225 (70%), Gaps = 11/225 (4%)
 Frame = +1

Query: 70  MDYDFRNKTGGS----QIPMHRPTTSTPAASSGHHPMYG---YPSIGQQ---TTGYSFAX 219
           MDYDFRN+T GS    Q PM+R T+S+  +    HPMYG   YP IGQQ   T       
Sbjct: 1   MDYDFRNRTTGSSYDSQTPMYRTTSSSTPSG---HPMYGQSLYPRIGQQQGHTPVPPVGR 57

Query: 220 XXXXXXXXXXXXXXXXXXIRVMLKPEYRITPPPQLSPQIGDIPRSNFQFDFDFERKVLAE 399
                             IRV +KPEYRITPPPQL+PQ+GDIPRSNFQF FD ER++LAE
Sbjct: 58  HSSYHQSSAPPPSSSGLGIRVSVKPEYRITPPPQLAPQMGDIPRSNFQFHFDLERRILAE 117

Query: 400 AEKERPDWSKLVHENPPSRPAEIPSQ-GSTTDHVVRKYIASGLSREAVPLAVANFGDDPI 576
           AEK+  +WSKL  EN PS+  E  S  GS  D VV KYIASGL+REAVPLAVAN+GD+P 
Sbjct: 118 AEKDIQNWSKLGLENLPSKTTESTSSLGSAADPVVSKYIASGLNREAVPLAVANYGDNPT 177

Query: 577 KVREFANGYTLLREMGFSSNSVAEALLMYDNDTDKAVAHFLNGSS 711
           KVREF NG++LLREMGFS+N+VAEALLMYDNDTDKA+ HFLN SS
Sbjct: 178 KVREFVNGFSLLREMGFSANNVAEALLMYDNDTDKALTHFLNSSS 222


>gb|AAK55708.1|AF380627_1 AT5g53330/K19E1_13 [Arabidopsis thaliana]
           gi|15809720|gb|AAL06788.1| AT5g53330/K19E1_13
           [Arabidopsis thaliana]
          Length = 221

 Score =  245 bits (625), Expect = 1e-62
 Identities = 131/223 (58%), Positives = 159/223 (71%), Gaps = 9/223 (4%)
 Frame = +1

Query: 70  MDYDFRNKTGGSQIP--MHRPTTSTPAASSGHHPMYGYPSIGQQTTG--YSFAXXXXXXX 237
           MDYD+RNK+GG   P  M+ P +++P+ SS +HPMYGYP IGQQT      F+       
Sbjct: 1   MDYDYRNKSGGPSYPRPMYGPPSTSPSPSS-NHPMYGYPKIGQQTGPGPQFFSPPERNSS 59

Query: 238 XXXXXXXXXXXXIRVMLKPEYRITPPPQLSPQIGDIPRSNFQFDFDFERKVLAEAEKERP 417
                       IRV LKPEYRITPPPQL P++GDI RS+FQFDF  ERKVLAEAEK+ P
Sbjct: 60  FQHNTSPSSGIGIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKVLAEAEKDNP 119

Query: 418 DWSKLVHENPPSRPAEIPSQGST-----TDHVVRKYIASGLSREAVPLAVANFGDDPIKV 582
           DWSK   ENPP++  E PS  S       DHVV KY ASGL+REAV +AVAN+GD+P KV
Sbjct: 120 DWSKFGSENPPAKFHE-PSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVANYGDNPTKV 178

Query: 583 REFANGYTLLREMGFSSNSVAEALLMYDNDTDKAVAHFLNGSS 711
           +EFANG+T +REMGF +N+VA+AL M+DNDTDKA+AH L+GSS
Sbjct: 179 QEFANGFTAIREMGFPTNAVADALFMFDNDTDKALAHLLHGSS 221


>ref|NP_568790.1| Ubiquitin-associated/translation elongation factor EF1B protein
           [Arabidopsis thaliana] gi|21536760|gb|AAM61092.1|
           proline-rich cell wall protein-like [Arabidopsis
           thaliana] gi|332008957|gb|AED96340.1|
           Ubiquitin-associated/translation elongation factor EF1B
           protein [Arabidopsis thaliana]
          Length = 221

 Score =  243 bits (621), Expect = 4e-62
 Identities = 130/223 (58%), Positives = 159/223 (71%), Gaps = 9/223 (4%)
 Frame = +1

Query: 70  MDYDFRNKTGGSQIP--MHRPTTSTPAASSGHHPMYGYPSIGQQTTG--YSFAXXXXXXX 237
           MDYD+RNK+GG   P  M+ P +++P+ SS +HPMYGYP IGQQT      F+       
Sbjct: 1   MDYDYRNKSGGPSYPRPMYGPPSTSPSPSS-NHPMYGYPKIGQQTGPGPQFFSPPERNSS 59

Query: 238 XXXXXXXXXXXXIRVMLKPEYRITPPPQLSPQIGDIPRSNFQFDFDFERKVLAEAEKERP 417
                       IRV LKPEYRITPPPQL P++GDI RS+FQFDF  ERKVLAEAEK+ P
Sbjct: 60  FQHNTSPSSGIGIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKVLAEAEKDNP 119

Query: 418 DWSKLVHENPPSRPAEIPSQGST-----TDHVVRKYIASGLSREAVPLAVANFGDDPIKV 582
           DWSK   ENPP++  E PS  S       DHVV KY ASGL+REAV +AVAN+GD+P KV
Sbjct: 120 DWSKFGSENPPAKFHE-PSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVANYGDNPTKV 178

Query: 583 REFANGYTLLREMGFSSNSVAEALLMYDNDTDKAVAHFLNGSS 711
           +EFANG+T +REMGF +N+VA+AL M++NDTDKA+AH L+GSS
Sbjct: 179 QEFANGFTAIREMGFPTNAVADALFMFENDTDKALAHLLHGSS 221


>ref|XP_002267522.1| PREDICTED: uncharacterized protein LOC100260370 [Vitis vinifera]
           gi|147771502|emb|CAN66995.1| hypothetical protein
           VITISV_019167 [Vitis vinifera]
          Length = 221

 Score =  243 bits (619), Expect = 7e-62
 Identities = 131/222 (59%), Positives = 160/222 (72%), Gaps = 8/222 (3%)
 Frame = +1

Query: 70  MDYDFRNKTG---GSQIPMHRPTTSTPAASSGHHPMYG---YPSIGQQTTG-YSFAXXXX 228
           M YD+RN+      SQIPM++ TTS+ +++ GH  +YG   YP + Q + G         
Sbjct: 1   MSYDYRNRANQPYDSQIPMYKTTTSSSSSAPGHQ-LYGAPMYPRVSQPSFGAVPPPGRAS 59

Query: 229 XXXXXXXXXXXXXXXIRVMLKPEYRITPPPQLSPQIGDIPRSNFQFDFDFERKVLAEAEK 408
                          IRV++KPE+RI+PPPQLSPQ+G+IPRS FQFDFD E+K+LAEAEK
Sbjct: 60  SYQQTSAPSSSPGLGIRVVIKPEFRISPPPQLSPQVGEIPRSTFQFDFDLEKKILAEAEK 119

Query: 409 ERPDWSKLVHENPPSRPAE-IPSQGSTTDHVVRKYIASGLSREAVPLAVANFGDDPIKVR 585
           +  +WS+L  EN PS+  E  PS GST D VV KYIASGLSREAVPLAVAN+GD+  KVR
Sbjct: 120 DSQNWSRLGLENLPSKALESTPSMGSTADPVVSKYIASGLSREAVPLAVANYGDNETKVR 179

Query: 586 EFANGYTLLREMGFSSNSVAEALLMYDNDTDKAVAHFLNGSS 711
           EF NGYTLLREMGFSS++VAEAL+MYDNDTDKA+AHFLN SS
Sbjct: 180 EFTNGYTLLREMGFSSSNVAEALVMYDNDTDKALAHFLNSSS 221


>ref|XP_004145917.1| PREDICTED: uncharacterized protein LOC101219735 [Cucumis sativus]
           gi|449497294|ref|XP_004160364.1| PREDICTED:
           uncharacterized protein LOC101225916 [Cucumis sativus]
          Length = 224

 Score =  238 bits (606), Expect = 2e-60
 Identities = 131/225 (58%), Positives = 152/225 (67%), Gaps = 11/225 (4%)
 Frame = +1

Query: 70  MDYDFRNKTG--GSQIPMHRPTTSTPAASSGHHPMYG---YPSIGQQTTGYS-----FAX 219
           M YDFRN +G   S  PM+  T S+ + S   HPMY    YP IGQQ    +      + 
Sbjct: 1   MAYDFRNNSGHYDSHQPMYTSTASS-SPSPSPHPMYSHSMYPRIGQQAPSSTPPVARLSS 59

Query: 220 XXXXXXXXXXXXXXXXXXIRVMLKPEYRITPPPQLSPQIGDIPRSNFQFDFDFERKVLAE 399
                             IRV +KPEYRITPPPQLSPQ+GDIPRSNFQFDF+FE+KVLAE
Sbjct: 60  HHYSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDFEFEKKVLAE 119

Query: 400 AEKERPDWSKLVHENPPSRPAE-IPSQGSTTDHVVRKYIASGLSREAVPLAVANFGDDPI 576
           AEKE P+W++   E+PP +P E   S GS  D VV KY+ASGL+REAV  AVAN+GD+P 
Sbjct: 120 AEKEAPNWNRFGLEHPPPKPVESTSSMGSIGDPVVSKYVASGLNREAVSFAVANYGDNPT 179

Query: 577 KVREFANGYTLLREMGFSSNSVAEALLMYDNDTDKAVAHFLNGSS 711
           KV+EF  GYTLLREMGFSS  V EALLMYDNDTDKAVAHFL G+S
Sbjct: 180 KVQEFVKGYTLLREMGFSSIKVVEALLMYDNDTDKAVAHFLGGTS 224


Top