BLASTX nr result

ID: Cnidium21_contig00016924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016924
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycin...   103   1e-20
ref|XP_003625508.1| RNA binding protein [Medicago truncatula] gi...   103   1e-20
ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein ...   100   2e-19
ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein ...    98   6e-19
gb|AFK47684.1| unknown [Lotus japonicus]                               96   4e-18

>ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
           gi|255628209|gb|ACU14449.1| unknown [Glycine max]
          Length = 139

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/57 (84%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
 Frame = -3

Query: 366 TIEEAEKAREGMNAKFLDGWVIFVDPAKQREYKPPQQEQ-QPSNTGYTTNKTIGWCG 199
           TIEEAEKAREGMNAKFLDGWVIFVDPAK RE +PPQQ Q QPS TG+T NKT+GWCG
Sbjct: 83  TIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSETGFTVNKTVGWCG 139


>ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
           gi|355500523|gb|AES81726.1| RNA binding protein
           [Medicago truncatula]
          Length = 141

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/57 (84%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
 Frame = -3

Query: 366 TIEEAEKAREGMNAKFLDGWVIFVDPAKQREYKPPQQEQ-QPSNTGYTTNKTIGWCG 199
           TIEEAEKAREGMNAKFLDGWVIFVDPAK RE +PPQQ Q QPS TG+T NKT+GWCG
Sbjct: 85  TIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSQTGFTVNKTVGWCG 141


>ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 139

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/57 (80%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
 Frame = -3

Query: 366 TIEEAEKAREGMNAKFLDGWVIFVDPAKQREYKPPQQEQ-QPSNTGYTTNKTIGWCG 199
           TIEEAE+AREGMNAKFLDGWVIFVDPAK RE +PPQQ Q QPS  G+T NKT+GWCG
Sbjct: 83  TIEEAERAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSEIGFTVNKTVGWCG 139


>ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|297741476|emb|CBI32608.3| unnamed protein product
           [Vitis vinifera]
          Length = 140

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/57 (80%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
 Frame = -3

Query: 366 TIEEAEKAREGMNAKFLDGWVIFVDPAKQREYK-PPQQEQQPSNTGYTTNKTIGWCG 199
           T+EEAEKAREGMNAKFLDGWVIFVDPAK RE + PPQQE + S TG+ TNKTIGWCG
Sbjct: 84  TLEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPQQEPESSETGFRTNKTIGWCG 140


>gb|AFK47684.1| unknown [Lotus japonicus]
          Length = 138

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/58 (75%), Positives = 49/58 (84%), Gaps = 2/58 (3%)
 Frame = -3

Query: 366 TIEEAEKAREGMNAKFLDGWVIFVDPAKQREYKPPQQ--EQQPSNTGYTTNKTIGWCG 199
           +IEEAEKA +GMNAKFLDGWVIFVDPAK RE +PP Q   QQPS TG+T NKT+GWCG
Sbjct: 81  SIEEAEKAGKGMNAKFLDGWVIFVDPAKPREPRPPMQSESQQPSETGFTVNKTVGWCG 138


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