BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016904
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   203   8e-50
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   198   2e-48
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   174   5e-41
ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-40
ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub...   164   4e-38

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
            gi|297743579|emb|CBI36446.3| unnamed protein product
            [Vitis vinifera]
          Length = 374

 Score =  203 bits (516), Expect = 8e-50
 Identities = 148/369 (40%), Positives = 194/369 (52%), Gaps = 12/369 (3%)
 Frame = -1

Query: 1126 SSDQDNPSSVDKVFSDQDLLTLILLCVPIKKLICFQTVSKLWFYLINNPCFSRLRESNPT 947
            SS Q+  SS   V S+ DLL+ +LL +PIK L+ F++VSK W  LI +P FSR +   P 
Sbjct: 7    SSSQE--SSAHIVASNDDLLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSRRKNLKPN 64

Query: 946  PSASALFLQNNVTNYNVPNDILFVPLDQDHHHEQTIISPFRT-YPF-ELASELYVSKLRI 773
            P  SALF               FVPLD           P +T  PF  L    +   + I
Sbjct: 65   P-VSALF--------------SFVPLD-----------PLQTSAPFTSLTFVDHPRGIEI 98

Query: 772  LDFCAGLLLCASCPYLVSGSDQKYYIYNPTTNQLTTLPQ---RSDDYPRAAFLAFDPSKS 602
            L  C GL  C+S  Y  + S++KYYIYNPTT Q TTLP    RS        LAFDPSKS
Sbjct: 99   LQSCNGLFCCSSVDY--NDSERKYYIYNPTTKQFTTLPPLCGRSVRRVLGVNLAFDPSKS 156

Query: 601  PHYKVFICVGLISDDQRRLKQFHTYSSETGSWSPSSQPITASTPVYSSDINYENSVYCNG 422
              YKV +CV           Q    S ETG W  S  P  A  P+    +++ + VY NG
Sbjct: 157  HTYKV-VCVQRCKSSYDHC-QIQISSLETGPWRVSGVPFAA--PI---SVDFPSGVYWNG 209

Query: 421  RIHWITESSACFYFDLDQQRLETVPIPPIGLRFDPTRRTIH-IGESQNHVHVTEIY-ASH 248
             IHWI+   A  YFDL+++ +  +P+PP+    D   R I   GES  H+H+ EIY +S 
Sbjct: 210  AIHWISPREASLYFDLNEELVREMPMPPV--PDDSNERGIRCFGESCGHLHLVEIYESST 267

Query: 247  NSLTVYQMKSDYSGWFLKYDVDLSPVAQVFPQMKEAAPDDV-----YLLLLFTKENFEED 83
                VY+M+ D+SGWF+K+ VDL+ VA  FP + E   ++      + +L   +   EED
Sbjct: 268  TQFNVYEMERDHSGWFVKFRVDLNGVALAFPGIIEGYHEEYDYMYSFSVLCIVRREKEED 327

Query: 82   SFLVLHIPG 56
            SFL LHIPG
Sbjct: 328  SFLALHIPG 336


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
            gi|223534434|gb|EEF36137.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 393

 Score =  198 bits (503), Expect = 2e-48
 Identities = 134/368 (36%), Positives = 197/368 (53%), Gaps = 15/368 (4%)
 Frame = -1

Query: 1114 DNPSSVDKVFSDQDLLTLILLCVPIKKLICFQTVSKLWFYLINNPCFSRLRE-SNPTPSA 938
            D+  S + + S++DL+T ILL +P+K L+ F++VSK W  LI+ P FS L    NP  + 
Sbjct: 2    DSSLSAEIIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTI 61

Query: 937  SALFLQNNVTNYNVPNDILFVPLDQDHHHEQTIISPFRTYPFELASELYVSKLRILDFCA 758
            SALFL+N+      P +  F+ L        +  SP       L+ +L+   ++IL  C 
Sbjct: 62   SALFLRNS------PLEFKFLSLSSSSSSSSSSASP-------LSFDLF-HGIKILQSCN 107

Query: 757  GLLLCASCPYLVSGSDQKYYIYNPTTNQLTTLPQRSDD----YPRAAF---LAFDPSKSP 599
            GLLLC++ P +  G  + YYI NPTT Q+ TLP    D     P   F   LAFDP KS 
Sbjct: 108  GLLLCSTLPKI--GQKRNYYISNPTTKQMFTLPSLVGDANAASPTTLFGLNLAFDPLKSC 165

Query: 598  HYKVFICVGLISDDQRRLKQFHTYSSETGSWSPSSQPITASTPVYSSDINYENSVYCNGR 419
            +YKV ICV   ++   +  Q  TY SE  +W  S  P  A       D+ ++N V+ NG 
Sbjct: 166  NYKV-ICVRSTTNSIYQY-QIETYQSEIAAWRLSGLPFVA-----PFDMVFDNGVFWNGA 218

Query: 418  IHWITESSACFYFDLDQQRLETVPIPPIGLRFDPTRRTIHIGESQNHVHVTEIYASHNS- 242
            IHWI+ +    YFD+D++ + ++P  P    +   RR  + GES  H+H+ EIY    + 
Sbjct: 219  IHWISATGNAIYFDMDRECISSMPKLPFSYEWG-KRRFRYFGESDGHLHLIEIYGLRTTQ 277

Query: 241  LTVYQMKSDYSGWFLKYDVDLSPVAQVFPQMKEAAPDD------VYLLLLFTKENFEEDS 80
              VY+M+ DYS W ++Y V L  V   FP+M  +  D        +++L   +E+  E+S
Sbjct: 278  FNVYEMEKDYSFWRIRYRVQLDHVVAAFPEMVRSYLDAGDSNYYAFVVLSLVEEDATEES 337

Query: 79   FLVLHIPG 56
             L+LHIPG
Sbjct: 338  SLLLHIPG 345


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
            gi|296090309|emb|CBI40128.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score =  174 bits (440), Expect = 5e-41
 Identities = 126/362 (34%), Positives = 179/362 (49%), Gaps = 12/362 (3%)
 Frame = -1

Query: 1105 SSVDKVFSDQDLLTLILLCVPIKKLICFQTVSKLWFYLINNPCFSRLRESNPTPSASALF 926
            SS ++V  + DLLT I L  P+K L+ F++VSK W  LI++P F        + S   + 
Sbjct: 27   SSAEQVAGNGDLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVL 86

Query: 925  LQNNVTNYNVPNDILFVPLDQDHHHEQTIISPFRTYPFELASELYVSKLRILDFCAGLLL 746
            L    +N++      F+  D+    E     P R+  F +   L V   ++L  C GLL 
Sbjct: 87   LGLPNSNFD------FISFDEKKASEP----PLRSLDF-IGDPLGV---KVLQVCNGLLC 132

Query: 745  CASCPYLVSGSDQKYYIYNPTTNQLTTLPQRSDDYPRAAF----LAFDPSKSPHYKVFIC 578
            C++   L  G+ + YYI N  T + + LP       R       LAFDPSKSP+Y V IC
Sbjct: 133  CSTVRSL--GTSRNYYICNLATRRFSVLPPPCSSGGRDTVFGINLAFDPSKSPYYSV-IC 189

Query: 577  VGLISDDQRRLKQFHTYSSETGSWSPSSQPITASTPVYSSDINYENSVYCNGRIHWITES 398
            V           Q   YSS TG W  S +P  A       D+ + + V+ NG +HWI+ S
Sbjct: 190  VRSCEVSISHY-QIEIYSSGTGDWRLSGKPFRAPF-----DMVFYDGVFWNGAVHWISPS 243

Query: 397  SACFYFDLDQQRLETVPIPPIGLRFDPTRRTIHIGESQNHVHVTEIYASHNS-LTVYQMK 221
             A  YF +D+ R++T+P PP G      RR  H GES  H+H+ EIY    +   VY+M+
Sbjct: 244  GASLYFGIDEGRIDTMPPPPPGPGGWGKRRIRHFGESGGHLHIIEIYGPRTTQFVVYEME 303

Query: 220  SDYSGWFLKYDVDLSPVAQVFPQMKEAAPD--DVY-----LLLLFTKENFEEDSFLVLHI 62
             DYS W +++ VDL  V   FP++ +   D  D+Y     +L L      EED  L+L I
Sbjct: 304  RDYSNWGVRFSVDLDKVIAAFPEITQNYLDAHDLYYYAYNVLCLIRGGGNEEDFSLLLQI 363

Query: 61   PG 56
             G
Sbjct: 364  RG 365


>ref|XP_002319737.1| predicted protein [Populus trichocarpa] gi|222858113|gb|EEE95660.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  171 bits (432), Expect = 4e-40
 Identities = 131/373 (35%), Positives = 194/373 (52%), Gaps = 18/373 (4%)
 Frame = -1

Query: 1105 SSVDKVFSDQDLLTLILLCVPIKKLICFQTVSKLWFYLINNPCFS-----RLRESNPTPS 941
            SS + + S+QDLLT IL+ +P K L+ F++VSK W  LI++P F        R  NPTP+
Sbjct: 7    SSAEIIASNQDLLTEILIRIPAKPLLKFKSVSKQWLSLISDPKFCIWHACHQRVLNPTPN 66

Query: 940  ASALFLQNNVTNYNVPNDILFVPLDQDHHHEQTIISPFRTYPFELASELYVSKLRILDFC 761
            A    L NN   Y+      F+PL  D   + +  S    + +   S  Y  +L+I + C
Sbjct: 67   A---LLLNNF--YSSTPTFQFIPLIGD---DSSSYSQAAVFDYLNVSPNY--RLKIKNSC 116

Query: 760  AGLLLCAS----CPYLVSGSDQKYYIYNPTTNQLTTL----PQRSDDYPRAAF--LAFDP 611
             GL+LC S    C +  +GS+ K  I NPTT Q  TL    P+  +    ++F  LAFDP
Sbjct: 117  NGLILCMSIFYGCGFDDAGSELKGIICNPTTKQFKTLSFPVPKFGNSKTYSSFYGLAFDP 176

Query: 610  SKSPHYKVFICVGLISDDQRRLK--QFHTYSSETGSWSPSSQPITASTPVYSSDINYENS 437
             KS HYK+ IC+ +   D R  K  Q + YSS T SWS     + A T +Y     + N 
Sbjct: 177  LKSHHYKI-ICLHV---DYRVSKNPQIYLYSSRTNSWSFLQNSLEAPT-LYG----FVNG 227

Query: 436  VYCNGRIHWITESSACFYFDLDQQRLETVPIPPIGLRFDPTRRTIHIGESQNHVHVTEIY 257
            V+CN  IHW +      YFD++ + L+ +P+PPI    +  R  ++ GES+  +H+  I 
Sbjct: 228  VFCNDAIHWCSYEQTTLYFDVNTESLKIMPMPPIFSTVNRFREMMYFGESRGRLHLAGIG 287

Query: 256  ASHNS-LTVYQMKSDYSGWFLKYDVDLSPVAQVFPQMKEAAPDDVYLLLLFTKENFEEDS 80
                S   V++M SDYSGW L Y+V+L  + + FP+ K     D + +L       EE+S
Sbjct: 288  RRFISRFDVWEMASDYSGWSLLYNVNLHSMKRAFPEQK----FDTFSILNVLLAEKEEES 343

Query: 79   FLVLHIPGMGDDL 41
             +V+ +  +   L
Sbjct: 344  KVVISVDSIAVSL 356


>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
            gi|34013883|gb|AAQ56109.1| F box protein family
            [Arabidopsis lyrata subsp. lyrata]
            gi|297317116|gb|EFH47538.1| F box protein family
            [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score =  164 bits (415), Expect = 4e-38
 Identities = 124/368 (33%), Positives = 186/368 (50%), Gaps = 19/368 (5%)
 Frame = -1

Query: 1105 SSVDKVFSDQDLLTLILLCVPIKKLICFQTVSKLWFYLINNPCFSR--LRESNPTPSASA 932
            SS   V +  D+L  IL  +PIK L+ F+ VSK W  LI NP FS   ++ ++P P +  
Sbjct: 26   SSATIVANIDDVLIQILSFLPIKTLLRFKRVSKRWLSLITNPDFSNRIIKSNHPLPISGF 85

Query: 931  LFLQNNVTNYNVPNDILFVPLD-QDHHHEQTIISPFRTYPFELASELYVSKLRILDFCAG 755
                     Y+      FV LD +D    Q I S    +  +  +++      I+    G
Sbjct: 86   FLHSPRAIKYS------FVSLDDEDDATNQRISSSLPLWFTDHQTDMI-----IMQSTNG 134

Query: 754  LLLCASCPYLVSGSDQKYYIYNPTTNQLTTLPQRSDDYPRAAFLAFDPSKSPHYKVFICV 575
            LLLC       +  +  YY+YNPTT Q T LPQ +     A  LAFDPSKSPHYKVF   
Sbjct: 135  LLLCQCSCASSNHFNTNYYVYNPTTKQYTLLPQITGHI--ALSLAFDPSKSPHYKVFCLR 192

Query: 574  G-----LISDDQRRLKQFHTYSSETGSWSPSSQPITASTPVYSSDINYENSVYCNGRIHW 410
            G     + S     L     YSS  G W      +T+     S+ I +  SV+ NG +HW
Sbjct: 193  GRSNNSVSSASDSELYHIEVYSSNEGLWRRVDPALTSP----STFIEFSYSVFWNGAVHW 248

Query: 409  ITESSA-CFYFDLDQQRLETVPIPPI----GLRFDPTRRTIH-IGESQNHVHVTEIY-AS 251
               SS  C  FD+ ++ ++ +P+P +     L  DP  RT+  + ES+ +++  E+   S
Sbjct: 249  YGLSSRDCLSFDISKEEIKILPLPDLDDEEALLPDP--RTLRFLDESRGNLYYIEVNDQS 306

Query: 250  HNSLTVYQMKSDYSGWFLKYDVDLSPVAQVFPQM--KEAAPDDVYL--LLLFTKENFEED 83
             + L VY+M+ + S W +KY+VDL P+A  FP+M  ++     +Y   ++ F KE  + +
Sbjct: 307  SSDLPVYEMERNSSSWSMKYNVDLEPLAAAFPEMITEDYTNRRIYAFSVIGFVKEETDAE 366

Query: 82   SFLVLHIP 59
            S+++LHIP
Sbjct: 367  SYILLHIP 374