BLASTX nr result

ID: Cnidium21_contig00016853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016853
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05150.1| predicted protein [Hordeum vulgare subsp. vulgare]    105   5e-21
ref|XP_002448093.1| hypothetical protein SORBIDRAFT_06g020970 [S...   104   6e-21
ref|XP_003580029.1| PREDICTED: ribosome-recycling factor-like [B...   103   1e-20
ref|NP_001053163.1| Os04g0490400 [Oryza sativa Japonica Group] g...   103   2e-20
ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ...   103   2e-20

>dbj|BAK05150.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 260

 Score =  105 bits (261), Expect = 5e-21
 Identities = 58/93 (62%), Positives = 67/93 (72%)
 Frame = +2

Query: 2   AIPPLTKEHMQAVCKLVTKSSEDAKQSIRRARQKALDXXXXXXXXXXXXXXXXXXXXADD 181
           A+PPLTKE MQA+CK+VTKS+ED KQSIRRARQKALD                     DD
Sbjct: 178 AVPPLTKETMQAMCKVVTKSAEDFKQSIRRARQKALD----------TIKKSSSSMPKDD 227

Query: 182 AKKLEKEVEEMTKKYIKSAEDMSKAKEKEITES 280
            K+LEKEVEE+TKK+IKSA+DM KAKEKEI+ S
Sbjct: 228 IKRLEKEVEELTKKFIKSADDMCKAKEKEISGS 260


>ref|XP_002448093.1| hypothetical protein SORBIDRAFT_06g020970 [Sorghum bicolor]
           gi|241939276|gb|EES12421.1| hypothetical protein
           SORBIDRAFT_06g020970 [Sorghum bicolor]
          Length = 258

 Score =  104 bits (260), Expect = 6e-21
 Identities = 57/93 (61%), Positives = 68/93 (73%)
 Frame = +2

Query: 2   AIPPLTKEHMQAVCKLVTKSSEDAKQSIRRARQKALDXXXXXXXXXXXXXXXXXXXXADD 181
           AIPPLTKE++QA+CK+VTKS+ED KQSIRRARQKALD                     DD
Sbjct: 176 AIPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALD----------TIKKSASSMPKDD 225

Query: 182 AKKLEKEVEEMTKKYIKSAEDMSKAKEKEITES 280
            K++EKEVEE+TKK+IKSA+DM KAKEKEI+ S
Sbjct: 226 VKRIEKEVEELTKKFIKSADDMCKAKEKEISGS 258


>ref|XP_003580029.1| PREDICTED: ribosome-recycling factor-like [Brachypodium distachyon]
          Length = 261

 Score =  103 bits (258), Expect = 1e-20
 Identities = 57/90 (63%), Positives = 66/90 (73%)
 Frame = +2

Query: 5   IPPLTKEHMQAVCKLVTKSSEDAKQSIRRARQKALDXXXXXXXXXXXXXXXXXXXXADDA 184
           IPPLTKE++QA+CK+VTKS+ED KQSIRRARQKALD                     DD 
Sbjct: 180 IPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALD----------TIKKSSSSMPKDDI 229

Query: 185 KKLEKEVEEMTKKYIKSAEDMSKAKEKEIT 274
           K+LEKEVEEMTKK+IKSA+DM KAKEKEI+
Sbjct: 230 KRLEKEVEEMTKKFIKSADDMCKAKEKEIS 259


>ref|NP_001053163.1| Os04g0490400 [Oryza sativa Japonica Group]
           gi|21740669|emb|CAD41132.1| OSJNBa0084K20.10 [Oryza
           sativa Japonica Group] gi|38347444|emb|CAE02486.2|
           OSJNBa0076N16.8 [Oryza sativa Japonica Group]
           gi|113564734|dbj|BAF15077.1| Os04g0490400 [Oryza sativa
           Japonica Group] gi|125548818|gb|EAY94640.1| hypothetical
           protein OsI_16419 [Oryza sativa Indica Group]
           gi|215704152|dbj|BAG92992.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 260

 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/90 (62%), Positives = 66/90 (73%)
 Frame = +2

Query: 5   IPPLTKEHMQAVCKLVTKSSEDAKQSIRRARQKALDXXXXXXXXXXXXXXXXXXXXADDA 184
           IPPLTKE++QA+CK+VTKS+ED KQSIRRARQKALD                     DD 
Sbjct: 179 IPPLTKENIQALCKVVTKSAEDFKQSIRRARQKALD----------TIKKSASGMPKDDV 228

Query: 185 KKLEKEVEEMTKKYIKSAEDMSKAKEKEIT 274
           K+LEKEVEE+TKK+IKSA+DM KAKEKEI+
Sbjct: 229 KRLEKEVEELTKKFIKSADDMCKAKEKEIS 258


>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
           gi|296090242|emb|CBI40061.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/91 (61%), Positives = 64/91 (70%)
 Frame = +2

Query: 5   IPPLTKEHMQAVCKLVTKSSEDAKQSIRRARQKALDXXXXXXXXXXXXXXXXXXXXADDA 184
           IPPLTKEH+QA+CK+V KS ED KQSIRRARQKALD                     D A
Sbjct: 177 IPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALD----------MIKKAGSSLPKDVA 226

Query: 185 KKLEKEVEEMTKKYIKSAEDMSKAKEKEITE 277
           K+LEKEV+E+TKK++KSAEDM KAKEKEI E
Sbjct: 227 KRLEKEVDELTKKFVKSAEDMCKAKEKEIAE 257