BLASTX nr result

ID: Cnidium21_contig00016800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016800
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333928.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002309874.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002524978.1| structural constituent of cell wall, putativ...    65   4e-09
ref|XP_002522642.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_003528391.1| PREDICTED: uncharacterized protein LOC100811...    63   2e-08

>ref|XP_002333928.1| predicted protein [Populus trichocarpa] gi|222839168|gb|EEE77519.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
 Frame = +3

Query: 180 MESHKVLLLSLFIMTVSFSGIGNVAASRRLLTLSSFPSIPNLPFPSVPTTPN-PSLPSFP 356
           M S K  +L+ FI  ++ S I    A+RRLL L   PS+PNLP P++P  P  PSLP  P
Sbjct: 97  MASFKCFILTFFI-ALAISNINVAQAARRLLQLPPLPSLPNLPKPTLPPLPTIPSLPQ-P 154

Query: 357 PIGGASPSFPSLPTPTI-GTPSFPSIPGIPGLFSPP 461
            +     + PSLP PT+   PS P++P +P +  PP
Sbjct: 155 TLPTLPTTQPSLPKPTLPPLPSLPTMPSVPKVTLPP 190


>ref|XP_002309874.1| predicted protein [Populus trichocarpa] gi|222852777|gb|EEE90324.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 44/116 (37%), Positives = 58/116 (50%), Gaps = 21/116 (18%)
 Frame = +3

Query: 180 MESHKVLLLSLFIMTVSFSGIGNVAASRRLLTLSSFPSIPNLPFPSVPTTPNPSLPSFP- 356
           M S K  +L+LFI  ++FS +    A+R LL L   P IP  P PS+P  P P+LP+ P 
Sbjct: 1   MASCKSFILALFI-ALTFSSMNVSIAARHLLQLPPLPKIPMPPLPSIPNLPQPTLPTLPT 59

Query: 357 -------PIGGASPSFPSLPT-PTI------------GTPSFPSIPGIPGLFSPPA 464
                  P     PS P++PT PT+              P+ P+IP IP L  PPA
Sbjct: 60  TQPSLPKPTLPPLPSIPTIPTFPTVPKVTLPPLPSMPSIPTIPTIPSIPFLSPPPA 115


>ref|XP_002524978.1| structural constituent of cell wall, putative [Ricinus communis]
           gi|223535722|gb|EEF37385.1| structural constituent of
           cell wall, putative [Ricinus communis]
          Length = 121

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 25/112 (22%)
 Frame = +3

Query: 204 LSLFIMTVSFSGIGNVAASRRLLTLSSFPSIPNL------PFPSVPTTPNPSLPSFP--- 356
           L +F + ++FSGI    A+R LL +   PS+P L      P PS+PT P P+LP+ P   
Sbjct: 8   LFVFFIALAFSGIDMGVAARNLLQMPPLPSVPTLPKPALPPLPSIPTLPQPTLPTLPTTQ 67

Query: 357 -----PIGGASPSFPSLPT-------PTIGTPSFP----SIPGIPGLFSPPA 464
                P     PS PS+PT       P    PS P    +IP IP L  PPA
Sbjct: 68  PSLPKPTLPPLPSLPSMPTLLKATLPPLSSMPSIPTIPTAIPSIPFLSPPPA 119


>ref|XP_002522642.1| conserved hypothetical protein [Ricinus communis]
           gi|223538118|gb|EEF39729.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
 Frame = +3

Query: 204 LSLFIMTVSFSGIGNVAASRRLLTLSSFPSIPNL------PFPSVPTTPNPSLPSFPPIG 365
           L +F++ ++FS I    A+R LL +   PS+PNL      P P++PT P P+LP+ P   
Sbjct: 8   LFVFVIALAFSAIDVGLAARNLLQMPPLPSVPNLPKPALPPLPTIPTLPQPTLPTMPTTQ 67

Query: 366 GASPS-----FPSLPT-PTIGTPSFPSIPGIPGLFSPPAEVP 473
            + P       PSLPT PT+   + P +P +P +   P  +P
Sbjct: 68  SSLPKPTLPPLPSLPTMPTLPKATLPPLPSMPSI---PTTIP 106


>ref|XP_003528391.1| PREDICTED: uncharacterized protein LOC100811341 [Glycine max]
          Length = 121

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
 Frame = +3

Query: 180 MESHKVLLLSLFIMTVSFSGIGNVAASRRLL-----TLSSFPSIPNL----PFPSVPTTP 332
           M S   ++L+LFI   SFS +    A+R LL      L   P++PN     P PS PT P
Sbjct: 1   MASQSCIILALFIAIFSFSSMDTAFAARHLLQTTTPNLPGTPTLPNPTTLPPLPSNPTLP 60

Query: 333 N------PSLPSFPPIGGASPSFPSLPTPTIGTPSFPSIPGIP------GLFSPPAEVPI 476
                  P++P+ P +    P+ PSL  P +   SFP +P IP        FSPP    I
Sbjct: 61  QGNVPPLPTMPTLPSLPSIFPTLPSLNLPPLPASSFPKMPSIPTNIPSFPFFSPPPSTSI 120


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