BLASTX nr result

ID: Cnidium21_contig00016780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016780
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|2...    66   1e-08
ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis v...    61   4e-07
emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]    61   4e-07
gb|EIE76772.1| hypothetical protein RO3G_01476 [Rhizopus delemar...    60   9e-07
gb|ACU56981.1| importin alpha [Citrus sinensis]                        60   9e-07

>ref|XP_002319478.1| predicted protein [Populus trichocarpa] gi|222857854|gb|EEE95401.1|
            predicted protein [Populus trichocarpa]
          Length = 537

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
 Frame = -3

Query: 1078 QALKTLTYIAYVSPNHASVIIDEDALESVCKVVNTTDLSSQMIDNLGKFLLVVCRVEFPD 899
            QA+  L  +A  SP+   +++   AL  +   +N     S M+ N    L   CR + P 
Sbjct: 182  QAVWALGNVAGDSPSCRDLVLGHGALMPLLAQLNENSKLS-MLRNATWTLSNFCRGKPPT 240

Query: 898  --NKVQVALTILNKLLQVELGTFHHIVRVCYALSYLSLRRHVKFEK----DACKRLV-LI 740
              ++V+ AL +L +L  + L     +   C+ALSYLS  ++ K +       C+RLV L+
Sbjct: 241  PFDQVKPALPVLQQL--IHLNDEEVLTDACWALSYLSDGQNDKIQAVIDAGVCRRLVELL 298

Query: 739  THPNNTVAVSALGVLKNIVKSGKSCQIQILIQDCEFLQCLERSAICCKPILFQKEAFEII 560
             HP+ TV + AL  + NIV +G   Q Q +I D + L CL +  +       +KEA   I
Sbjct: 299  LHPSPTVLIPALRTVGNIV-TGDDGQTQFVI-DNQVLPCLHQLLLQNHKKSIKKEACWTI 356

Query: 559  SELAARGETSIKDMHEAGLIDTLSKLLELELDDFNIK 449
            S + A   T I+ + EA +I  L  LL+    +F+IK
Sbjct: 357  SNITAGNRTQIQAVIEANIILPLVNLLQHA--EFDIK 391


>ref|XP_002281670.1| PREDICTED: importin subunit alpha-1 [Vitis vinifera]
            gi|296089795|emb|CBI39614.3| unnamed protein product
            [Vitis vinifera]
          Length = 535

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 7/217 (3%)
 Frame = -3

Query: 1078 QALKTLTYIAYVSPNHASVIIDEDALESVCKVVNTTDLSSQMIDNLGKFLLVVCRVEFPD 899
            QA+  L  +A  SP+   +++   AL  +   +N     S M+ N    L   CR + P 
Sbjct: 181  QAVWALGNVAGDSPSCRDLVLGHGALMPLLSQLNEHSKLS-MLRNATWTLSNFCRGKPPT 239

Query: 898  --NKVQVALTILNKLLQVELGTFHHIVRVCYALSYLSLRRHVKF----EKDACKRLV-LI 740
               +V+ AL +L +L  + L     +   C+ALSYLS   + K     E   C RLV L+
Sbjct: 240  PFEQVKPALPVLRQL--IHLNDEEVLTDACWALSYLSDGPNDKIQAVLEAGVCPRLVELL 297

Query: 739  THPNNTVAVSALGVLKNIVKSGKSCQIQILIQDCEFLQCLERSAICCKPILFQKEAFEII 560
             HP+ TV + AL  + NIV +G   Q Q +I D + L CL +          +KEA   I
Sbjct: 298  LHPSPTVLIPALRTVGNIV-TGDDAQTQFVI-DNQVLPCLYQLLTQNHKKSIKKEACWTI 355

Query: 559  SELAARGETSIKDMHEAGLIDTLSKLLELELDDFNIK 449
            S + A  +  I+ + EA +I  L  LL+    +F+IK
Sbjct: 356  SNITAGNKGQIQAVIEANIILPLVNLLQHA--EFDIK 390


>emb|CAN64716.1| hypothetical protein VITISV_026717 [Vitis vinifera]
          Length = 523

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 69/217 (31%), Positives = 104/217 (47%), Gaps = 7/217 (3%)
 Frame = -3

Query: 1078 QALKTLTYIAYVSPNHASVIIDEDALESVCKVVNTTDLSSQMIDNLGKFLLVVCRVEFPD 899
            QA+  L  +A  SP+   +++   AL  +   +N     S M+ N    L   CR + P 
Sbjct: 169  QAVWALGNVAGDSPSCRDLVLGHGALMPLLSQLNEHSKLS-MLRNATWTLSNFCRGKPPT 227

Query: 898  --NKVQVALTILNKLLQVELGTFHHIVRVCYALSYLSLRRHVKF----EKDACKRLV-LI 740
               +V+ AL +L +L  + L     +   C+ALSYLS   + K     E   C RLV L+
Sbjct: 228  PFEQVKPALPVLRQL--IHLNDEEVLTDACWALSYLSDGPNDKIQAVLEAGVCPRLVELL 285

Query: 739  THPNNTVAVSALGVLKNIVKSGKSCQIQILIQDCEFLQCLERSAICCKPILFQKEAFEII 560
             HP+ TV + AL  + NIV +G   Q Q +I D + L CL +          +KEA   I
Sbjct: 286  LHPSPTVLIPALRTVGNIV-TGDDAQTQFVI-DNQVLPCLYQLLTQNHKKSIKKEACWTI 343

Query: 559  SELAARGETSIKDMHEAGLIDTLSKLLELELDDFNIK 449
            S + A  +  I+ + EA +I  L  LL+    +F+IK
Sbjct: 344  SNITAGNKGQIQAVIEANIILPLVNLLQHA--EFDIK 378


>gb|EIE76772.1| hypothetical protein RO3G_01476 [Rhizopus delemar RA 99-880]
          Length = 525

 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 6/220 (2%)
 Frame = -3

Query: 1078 QALKTLTYIAYVSPNHASVIIDEDALESVCKVVNTTDLSSQMIDNLGKFLLVVCRVEFPD 899
            QA+  L  IA  S      ++++  L  +  ++N  +  S M+ N    L  +CR + P 
Sbjct: 177  QAVWALGNIAGDSAACRDFVLEQGVLPPLLAILNDNNKLS-MLRNATWTLSNLCRGKNPQ 235

Query: 898  NKVQVALTILNKLLQVELGTFHHI-VRVCYALSYLSL----RRHVKFEKDACKRLV-LIT 737
                + +  L  L ++   T   + +  C+ALSYLS     R     E   C+RLV L+ 
Sbjct: 236  PNWNMVVPCLPVLAKLIYSTDEEVLIDACWALSYLSDGQNDRIQTVIESGVCRRLVELLM 295

Query: 736  HPNNTVAVSALGVLKNIVKSGKSCQIQILIQDCEFLQCLERSAICCKPILFQKEAFEIIS 557
            HP+ +V   AL  + NIV +G   Q Q++I +C  L  L  S +       +KEA   IS
Sbjct: 296  HPSTSVQTPALRSVGNIV-TGTDLQTQVII-NCGVLPAL-LSLLSSHKEAVRKEACWTIS 352

Query: 556  ELAARGETSIKDMHEAGLIDTLSKLLELELDDFNIKMAVC 437
             + A     I  + EAG+I +L ++L     DF  +   C
Sbjct: 353  NITAGNVAQIDAVIEAGIIPSLIQILATA--DFKTRKEAC 390


>gb|ACU56981.1| importin alpha [Citrus sinensis]
          Length = 535

 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
 Frame = -3

Query: 1078 QALKTLTYIAYVSPNHASVIIDEDALESVCKVVNTTDLSSQMIDNLGKFLLVVCRVEFPD 899
            QA+  L  +A  SP+   +++   AL  +   +N     S M+ N    L   CR + P 
Sbjct: 179  QAVWALGNVAGDSPSCRDLVLSSGALMPLLAQLNEHSKLS-MLRNATWTLSNFCRGKPPT 237

Query: 898  --NKVQVALTILNKLLQVELGTFHHIVRVCYALSYLSLRRHVKF----EKDACKRLV-LI 740
               +V+ AL IL +L  + L     +   C+ALSYLS   + K     E   C RLV L+
Sbjct: 238  PFEQVKPALPILQRL--IHLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELL 295

Query: 739  THPNNTVAVSALGVLKNIVKSGKSCQIQILIQDCEFLQCLERSAICCKPILFQKEAFEII 560
             HP+ TV + AL  + NIV +G   Q Q +I D   L CL +          +KEA   I
Sbjct: 296  MHPSATVLIPALRTVGNIV-TGDDAQTQFVI-DNGVLPCLYQLLTHNHKKSIKKEACWTI 353

Query: 559  SELAARGETSIKDMHEAGLIDTLSKLLE 476
            S + A     I+ + EA +I  L  LL+
Sbjct: 354  SNITAGNRAQIQAVIEANIILPLVHLLQ 381


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