BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016777
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    176   1e-42
gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis]             176   1e-42
gb|AAL06413.1|AF378049_1 reverse transcriptase [Pisum sativum]        175   4e-42
gb|ABG37658.1| integrase [Populus trichocarpa]                        171   6e-41
gb|AAL06416.1|AF378057_1 reverse transcriptase [Sorghum bicolor]      166   2e-39

>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  176 bits (447), Expect = 1e-42
 Identities = 79/94 (84%), Positives = 87/94 (92%)
 Frame = +3

Query: 3    KGGLTVIKNEDNELIPTRTVTGWRICIDYRKLNKATRKDHFPLPFIDQMLDRLAGHQYYC 182
            K G+TVI+NE NELIPTR  TGWR+CIDYRKLN ATRKDHFPLPFIDQML+RLAGH++YC
Sbjct: 880  KSGITVIQNEANELIPTRIQTGWRVCIDYRKLNLATRKDHFPLPFIDQMLERLAGHEFYC 939

Query: 183  LLDGYSGYNQICIAPEDQEKTTFTCPFGTFAFRR 284
             LDGYSGYNQI IAPEDQEKTTFTCP+GTFA+RR
Sbjct: 940  FLDGYSGYNQIPIAPEDQEKTTFTCPYGTFAYRR 973


>gb|ABD63145.1| F7F22.17, putative [Asparagus officinalis]
          Length = 680

 Score =  176 bits (447), Expect = 1e-42
 Identities = 79/94 (84%), Positives = 87/94 (92%)
 Frame = +3

Query: 3   KGGLTVIKNEDNELIPTRTVTGWRICIDYRKLNKATRKDHFPLPFIDQMLDRLAGHQYYC 182
           K G+TVI+NE NELIPTR  TGWR+CIDYRKLN ATRKDHFPLPFIDQML+RLAGH++YC
Sbjct: 185 KSGITVIQNEANELIPTRIQTGWRVCIDYRKLNLATRKDHFPLPFIDQMLERLAGHEFYC 244

Query: 183 LLDGYSGYNQICIAPEDQEKTTFTCPFGTFAFRR 284
            LDGYSGYNQI IAPEDQEKTTFTCP+GTFA+RR
Sbjct: 245 FLDGYSGYNQIPIAPEDQEKTTFTCPYGTFAYRR 278


>gb|AAL06413.1|AF378049_1 reverse transcriptase [Pisum sativum]
          Length = 254

 Score =  175 bits (443), Expect = 4e-42
 Identities = 77/94 (81%), Positives = 86/94 (91%)
 Frame = +3

Query: 3   KGGLTVIKNEDNELIPTRTVTGWRICIDYRKLNKATRKDHFPLPFIDQMLDRLAGHQYYC 182
           KGG +VI NE NELIPTRTVTGWR+CID+R+LN ATRKDHFPLPFIDQML+RLAGH+YYC
Sbjct: 32  KGGTSVILNEKNELIPTRTVTGWRVCIDHRRLNTATRKDHFPLPFIDQMLERLAGHEYYC 91

Query: 183 LLDGYSGYNQICIAPEDQEKTTFTCPFGTFAFRR 284
            LDGYSGYNQI +APEDQEKT FTCP+G FA+RR
Sbjct: 92  FLDGYSGYNQIVVAPEDQEKTAFTCPYGIFAYRR 125


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score =  171 bits (433), Expect = 6e-41
 Identities = 76/94 (80%), Positives = 86/94 (91%)
 Frame = +3

Query: 3   KGGLTVIKNEDNELIPTRTVTGWRICIDYRKLNKATRKDHFPLPFIDQMLDRLAGHQYYC 182
           K G+TVI NE NELIPTRT+TGWR+CIDYRKLN  TRKDHFPLPF+DQ+L+R+AGH++YC
Sbjct: 373 KSGVTVITNEKNELIPTRTITGWRMCIDYRKLNSMTRKDHFPLPFMDQILERVAGHEFYC 432

Query: 183 LLDGYSGYNQICIAPEDQEKTTFTCPFGTFAFRR 284
            LDGYSGYNQI IA EDQEKTTFTCPFGTFA+RR
Sbjct: 433 FLDGYSGYNQIEIALEDQEKTTFTCPFGTFAYRR 466


>gb|AAL06416.1|AF378057_1 reverse transcriptase [Sorghum bicolor]
          Length = 254

 Score =  166 bits (420), Expect = 2e-39
 Identities = 73/94 (77%), Positives = 85/94 (90%)
 Frame = +3

Query: 3   KGGLTVIKNEDNELIPTRTVTGWRICIDYRKLNKATRKDHFPLPFIDQMLDRLAGHQYYC 182
           KGG+TVI NE NELIP RTVTGW++CIDYRKLNKATRKDHFPLPFID+ML+RLA H ++C
Sbjct: 32  KGGMTVIINEKNELIPQRTVTGWQMCIDYRKLNKATRKDHFPLPFIDEMLERLANHSFFC 91

Query: 183 LLDGYSGYNQICIAPEDQEKTTFTCPFGTFAFRR 284
            LDGYSGY+QI I P+DQ KTTFTCP+GT+A+RR
Sbjct: 92  FLDGYSGYHQIPIHPDDQSKTTFTCPYGTYAYRR 125