BLASTX nr result

ID: Cnidium21_contig00016764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016764
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47
gb|AFK34661.1| unknown [Lotus japonicus]                              186   1e-45
ref|XP_002887420.1| zinc finger family protein [Arabidopsis lyra...   186   2e-45
ref|NP_565037.1| C3HC4-type RING finger protein [Arabidopsis tha...   184   5e-45
ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45

>ref|XP_002325966.1| predicted protein [Populus trichocarpa] gi|222862841|gb|EEF00348.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  191 bits (485), Expect = 5e-47
 Identities = 85/131 (64%), Positives = 101/131 (77%)
 Frame = -2

Query: 393 MDGPPANDWCSICHNNFDVPCQANCSHWFCGNCILQVWNHGSTFQPCLCPLCRRQITLLV 214
           MDGPP ND+CSICH +F++ CQANCSHWFCG+CI+ VW+HGS  QPC CPLCRRQITLLV
Sbjct: 1   MDGPPVNDFCSICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLV 60

Query: 213 PTEYSSQHRHDPEVSEILGKVETYNRMFGQRSDGLIQXXXXXXXXXXXXXREMMDPQRSL 34
           P E S + R DP+V+E+LGK+E YN +FG  + GLIQ             RE+MDPQRSL
Sbjct: 61  PGEASLRERSDPDVAEVLGKIERYNHLFGGNTSGLIQRMQDLPFLLRRLLREIMDPQRSL 120

Query: 33  PLVIRARVYLA 1
           PLVIRARVY+A
Sbjct: 121 PLVIRARVYIA 131


>gb|AFK34661.1| unknown [Lotus japonicus]
          Length = 188

 Score =  186 bits (473), Expect = 1e-45
 Identities = 83/131 (63%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
 Frame = -2

Query: 390 DGPPANDWCSICHNNFDVPCQANCSHWFCGNCILQVWNHGSTFQPCLCPLCRRQITLLVP 211
           +GPP ND CS+CH NF +PCQANCSHWFC NCI+ VWNHGS  QPC CPLCRR ITLLVP
Sbjct: 4   EGPPLNDLCSVCHGNFHIPCQANCSHWFCANCIMLVWNHGSAIQPCKCPLCRRPITLLVP 63

Query: 210 TEY-SSQHRHDPEVSEILGKVETYNRMFGQRSDGLIQXXXXXXXXXXXXXREMMDPQRSL 34
           TE  S+ HR +PEV+ +L +++TYNR FG RS G +Q             RE +DPQRSL
Sbjct: 64  TEQDSASHRQEPEVAHVLSQIQTYNRFFGARSSGPLQRMLDLPFLLRRLAREFLDPQRSL 123

Query: 33  PLVIRARVYLA 1
           PLVIRARVY+A
Sbjct: 124 PLVIRARVYIA 134


>ref|XP_002887420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333261|gb|EFH63679.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score =  186 bits (471), Expect = 2e-45
 Identities = 83/131 (63%), Positives = 100/131 (76%)
 Frame = -2

Query: 393 MDGPPANDWCSICHNNFDVPCQANCSHWFCGNCILQVWNHGSTFQPCLCPLCRRQITLLV 214
           M+ PP ND CSICH++F  PCQANCSHWFCGNCI+QVW HGST QPC CPLCRR I+LLV
Sbjct: 1   MNSPPENDLCSICHSHFTAPCQANCSHWFCGNCIMQVWRHGSTLQPCKCPLCRRPISLLV 60

Query: 213 PTEYSSQHRHDPEVSEILGKVETYNRMFGQRSDGLIQXXXXXXXXXXXXXREMMDPQRSL 34
           P+E + + R+D  V+++LG +ETYNR+FG RS  L+Q             REMMDPQR+L
Sbjct: 61  PSEDTIRDRNDSTVADVLGNLETYNRLFGGRSTSLVQRMQDLPFLLRRLLREMMDPQRTL 120

Query: 33  PLVIRARVYLA 1
           PLVIRARVY+A
Sbjct: 121 PLVIRARVYIA 131


>ref|NP_565037.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
           gi|13878189|gb|AAK44172.1|AF370357_1 unknown protein
           [Arabidopsis thaliana] gi|16323398|gb|AAL15193.1|
           unknown protein [Arabidopsis thaliana]
           gi|21536916|gb|AAM61248.1| unknown [Arabidopsis
           thaliana] gi|332197164|gb|AEE35285.1| C3HC4-type RING
           finger protein [Arabidopsis thaliana]
          Length = 185

 Score =  184 bits (468), Expect = 5e-45
 Identities = 83/131 (63%), Positives = 98/131 (74%)
 Frame = -2

Query: 393 MDGPPANDWCSICHNNFDVPCQANCSHWFCGNCILQVWNHGSTFQPCLCPLCRRQITLLV 214
           M+ PP ND CSICH++F  PCQANCSHWFCGNCI+ VW HGST QPC CPLCRR I+LLV
Sbjct: 1   MNSPPENDLCSICHSHFTAPCQANCSHWFCGNCIMLVWRHGSTLQPCKCPLCRRHISLLV 60

Query: 213 PTEYSSQHRHDPEVSEILGKVETYNRMFGQRSDGLIQXXXXXXXXXXXXXREMMDPQRSL 34
           P+E + + R+D  V E+LG +ETYNR+FG RS  L+Q             REMMDPQR+L
Sbjct: 61  PSEDTIRDRNDATVKEVLGNLETYNRLFGGRSSSLVQRMQDLPFLLRRLLREMMDPQRTL 120

Query: 33  PLVIRARVYLA 1
           PLVIRARVY+A
Sbjct: 121 PLVIRARVYIA 131


>ref|XP_002327279.1| predicted protein [Populus trichocarpa] gi|222835649|gb|EEE74084.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  184 bits (466), Expect = 8e-45
 Identities = 80/131 (61%), Positives = 99/131 (75%)
 Frame = -2

Query: 393 MDGPPANDWCSICHNNFDVPCQANCSHWFCGNCILQVWNHGSTFQPCLCPLCRRQITLLV 214
           MDGPP ND C+ICH +F++ CQANCSHWFCG+CI+ VW+HGS  QPC CPLCRRQITLLV
Sbjct: 1   MDGPPGNDCCAICHGHFNIACQANCSHWFCGDCIMLVWHHGSVLQPCKCPLCRRQITLLV 60

Query: 213 PTEYSSQHRHDPEVSEILGKVETYNRMFGQRSDGLIQXXXXXXXXXXXXXREMMDPQRSL 34
           P E S + R+DP V+E+LGK+E YN +FG  +  L+Q             RE+MDPQRSL
Sbjct: 61  PGEASLRERNDPHVAEVLGKIERYNHLFGGNTSSLVQRMQDLPFLLRRLLREIMDPQRSL 120

Query: 33  PLVIRARVYLA 1
           P+VI+ARVY+A
Sbjct: 121 PVVIKARVYIA 131


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