BLASTX nr result

ID: Cnidium21_contig00016742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016742
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268213.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...   276   1e-71
emb|CAN72725.1| hypothetical protein VITISV_015092 [Vitis vinifera]   273   9e-71
emb|CBI40095.3| unnamed protein product [Vitis vinifera]              239   1e-60
ref|XP_002308112.1| predicted protein [Populus trichocarpa] gi|2...   230   7e-58
ref|XP_004149511.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...   210   5e-52

>ref|XP_002268213.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Vitis
            vinifera]
          Length = 392

 Score =  276 bits (705), Expect = 1e-71
 Identities = 144/258 (55%), Positives = 176/258 (68%), Gaps = 7/258 (2%)
 Frame = +2

Query: 512  MSSCISGGGRTYGFDLDIVKXXXXXXXXXXXXXXXXXXXXXXXX-PVTILHRKPRTTRKR 688
            MSSC+SG GRTYGF+L+IVK                         P+ I  RKPRT RKR
Sbjct: 1    MSSCLSGAGRTYGFELEIVKSPSSTSPRTSHSSSPSSTISESSNSPIAISTRKPRTPRKR 60

Query: 689  PNQTYNEAALLLSTAYPKIFSTKHFTKLCKSSKLYNSFVDEPQELLLPFQTIDNSGFLLH 868
            PNQTYNEAA LLSTAYP IFSTK+    CK +K ++SF+++  ELL PF+  D SGFLLH
Sbjct: 61   PNQTYNEAAALLSTAYPNIFSTKNLKNPCKFTKSHDSFLEDSSELLFPFRAFDASGFLLH 120

Query: 869  QPILEKPILGIVPKIVNSCGRACQSLQESDLYGNSLETCDGHQDDFDAESILDEEIEEGI 1048
            QP+ EKP   ++PK+VN C + CQS  ES+  G S E CDG ++DFDAESILDEEIE GI
Sbjct: 121  QPVQEKPSFQMLPKVVNCCEKPCQSSVESEFPGKSPELCDGFEEDFDAESILDEEIEGGI 180

Query: 1049 DSIMGNLSVNNDSIIDESTNTSCI------GYPLGLGFNGNLDCDFGMKRGGVRALRNVD 1210
            DSIMGNLSV+N+ + DE+TN  C       G P+GLGF G  +  FGM+R GVRALR+VD
Sbjct: 181  DSIMGNLSVDNE-MSDEATNPVCFNSYYGNGIPMGLGFGGKFEFGFGMRR-GVRALRHVD 238

Query: 1211 ESNWWSFPTVAVADITPK 1264
            E +WW FPTV + +I+PK
Sbjct: 239  EGDWWRFPTVDILEISPK 256


>emb|CAN72725.1| hypothetical protein VITISV_015092 [Vitis vinifera]
          Length = 392

 Score =  273 bits (697), Expect = 9e-71
 Identities = 144/258 (55%), Positives = 176/258 (68%), Gaps = 7/258 (2%)
 Frame = +2

Query: 512  MSSCISGGGRTYGFDLDIVKXXXXXXXXXXXXXXXXXXXXXXXX-PVTILHRKPRTTRKR 688
            MSSC+SG GRTYGF+L+IVK                         P+ I  RK RT RKR
Sbjct: 1    MSSCLSGAGRTYGFELEIVKXPSSTSPRTSHSSSPSSTISESSNSPIAISTRKXRTPRKR 60

Query: 689  PNQTYNEAALLLSTAYPKIFSTKHFTKLCKSSKLYNSFVDEPQELLLPFQTIDNSGFLLH 868
            PNQTYNEAA LLSTAYP IFSTK+    CK +K ++SF+++  ELL PF+  D SGFLLH
Sbjct: 61   PNQTYNEAAALLSTAYPNIFSTKNLKNPCKFTKSHDSFLEDSSELLFPFRAFDASGFLLH 120

Query: 869  QPILEKPILGIVPKIVNSCGRACQSLQESDLYGNSLETCDGHQDDFDAESILDEEIEEGI 1048
            QP+ EKP   ++PK+VN C + CQS  ES+  G S E CDG ++DFDAESILDEEIE GI
Sbjct: 121  QPVQEKPSFQMLPKVVNCCEKPCQSSVESEFPGKSPELCDGFEEDFDAESILDEEIEGGI 180

Query: 1049 DSIMGNLSVNNDSIIDESTNTSCI------GYPLGLGFNGNLDCDFGMKRGGVRALRNVD 1210
            DSIMGNLSV+N+ + DE+TN  C       G P+GLGF G  +  FGM+R GVRALR+VD
Sbjct: 181  DSIMGNLSVDNE-MSDEATNPVCFNSYYGNGIPMGLGFGGKFEFGFGMRR-GVRALRHVD 238

Query: 1211 ESNWWSFPTVAVADITPK 1264
            E +WW FPTV + +I+PK
Sbjct: 239  EGDWWRFPTVDILEISPK 256


>emb|CBI40095.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  239 bits (610), Expect = 1e-60
 Identities = 133/259 (51%), Positives = 161/259 (62%), Gaps = 7/259 (2%)
 Frame = +2

Query: 509  EMSSCISGGGRTYGFDLDIVKXXXXXXXXXXXXXXXXXXXXXXXX-PVTILHRKPRTTRK 685
            +MSSC+SG GRTYGF+L+IVK                         P+ I  RKPRT RK
Sbjct: 25   KMSSCLSGAGRTYGFELEIVKSPSSTSPRTSHSSSPSSTISESSNSPIAISTRKPRTPRK 84

Query: 686  RPNQTYNEAALLLSTAYPKIFSTKHFTKLCKSSKLYNSFVDEPQELLLPFQTIDNSGFLL 865
            RPNQTYNEAA LLSTAYP IFSTK+    CK +K ++SF+++  ELL PF+  D SGFLL
Sbjct: 85   RPNQTYNEAAALLSTAYPNIFSTKNLKNPCKFTKSHDSFLEDSSELLFPFRAFDASGFLL 144

Query: 866  HQPILEKPILGIVPKIVNSCGRACQSLQESDLYGNSLETCDGHQDDFDAESILDEEIEEG 1045
            HQP+ EKP                           S E CDG ++DFDAESILDEEIE G
Sbjct: 145  HQPVQEKP-------------------------RKSPELCDGFEEDFDAESILDEEIEGG 179

Query: 1046 IDSIMGNLSVNNDSIIDESTNTSCI------GYPLGLGFNGNLDCDFGMKRGGVRALRNV 1207
            IDSIMGNLSV+N+ + DE+TN  C       G P+GLGF G  +  FGM+R GVRALR+V
Sbjct: 180  IDSIMGNLSVDNE-MSDEATNPVCFNSYYGNGIPMGLGFGGKFEFGFGMRR-GVRALRHV 237

Query: 1208 DESNWWSFPTVAVADITPK 1264
            DE +WW FPTV + +I+PK
Sbjct: 238  DEGDWWRFPTVDILEISPK 256


>ref|XP_002308112.1| predicted protein [Populus trichocarpa] gi|222854088|gb|EEE91635.1|
            predicted protein [Populus trichocarpa]
          Length = 448

 Score =  230 bits (586), Expect = 7e-58
 Identities = 133/265 (50%), Positives = 160/265 (60%), Gaps = 15/265 (5%)
 Frame = +2

Query: 515  SSCISGGGRTYGFDLDIVKXXXXXXXXXXXXXXXXXXXXXXXX-PVTILHRKPRTTRKRP 691
            S CISGGGRTYGFDL+IVK                         P+ I  RK RT RKRP
Sbjct: 3    SPCISGGGRTYGFDLEIVKSSSTSSTRTSHTSSPSSTISESSNSPLAISTRKSRTPRKRP 62

Query: 692  NQTYNEAALLLSTAYPKIFSTKHFTKLCKSSKLYNS--FVDEPQELLLPFQTIDNSGFLL 865
            NQTYNEAA LLSTAYP IFSTKH TK  K +K  ++   +D+  +LLLPF+  DNSGFL+
Sbjct: 63   NQTYNEAAALLSTAYPNIFSTKHLTKSSKFTKPQDNSLLLDQSSDLLLPFRVFDNSGFLI 122

Query: 866  HQPILEKPILGIVPKIVNSCGRA-CQSLQESDLYGNSLETCDGHQDDFDAESILDEEIEE 1042
            HQPI  KP  G   +  N   ++ CQS  E D +GNS+E CDG  +DFDAESILDEE EE
Sbjct: 123  HQPIQGKPSYGNESRFANFTDKSSCQSSGEVDFHGNSVELCDGLDEDFDAESILDEEFEE 182

Query: 1043 GIDSIMGNLSVNNDSIIDESTN----------TSCIGYPLGLGFNGNLDCDFGM-KRGGV 1189
            GIDSIMG+ S+ N+ ++DE  N           S  G  +G  F G      G+  R GV
Sbjct: 183  GIDSIMGHSSIGNE-MVDEVPNGISSSFGGQMNSWYGSSMGYNFGGKSQYGHGIAMRRGV 241

Query: 1190 RALRNVDESNWWSFPTVAVADITPK 1264
            RALR+VDE NWW FP V +  I+P+
Sbjct: 242  RALRHVDEGNWWDFPIVDMLQISPR 266


>ref|XP_004149511.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucumis
            sativus]
          Length = 430

 Score =  210 bits (535), Expect = 5e-52
 Identities = 135/269 (50%), Positives = 155/269 (57%), Gaps = 19/269 (7%)
 Frame = +2

Query: 515  SSCISGGGRTYGFDLDIVKXXXXXXXXXXXXXXXXXXXXXXXXPVT---ILHRKPRTTRK 685
            S CISGGGR Y FDL+I+K                          T   I  RK RT RK
Sbjct: 3    SPCISGGGRAYNFDLEILKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTPRK 62

Query: 686  RPNQTYNEAALLLSTAYPKIFSTKHFT---KLCKSSKLYNSFVDEPQELLLPFQTIDNSG 856
            RPNQTYNEA +LLSTAYP +FSTKH T   K  KS    +S   E  ELLLPF+ ID+SG
Sbjct: 63   RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDSSG 122

Query: 857  FLLHQPIL-EKPILGIVPKIVNSC-GRACQSLQESDLYGNSLETCDGHQDDFDAESILDE 1030
            FLLHQP+L EKP   I  K+ N    R C S  E D   NS+E      +DFDAESILDE
Sbjct: 123  FLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEI--EEIEDFDAESILDE 180

Query: 1031 EIEEGIDSIMGNLSVNNDSIIDESTNTSCIG----------YPLGLGFNGNLDCDFGMKR 1180
            EIEEGIDSIMGNLSV+N      ST  SC+            P+GLGFN   +  FG ++
Sbjct: 181  EIEEGIDSIMGNLSVDNLE-KGNSTQDSCVNANNHPRNWNWNPIGLGFNQKFESGFGFRK 239

Query: 1181 GGVR-ALRNVDESNWWSFPTVAVADITPK 1264
            G  R A+R VD  NWW FPTV V +I+PK
Sbjct: 240  GIERTAIRGVDNGNWWRFPTVDVIEISPK 268


Top