BLASTX nr result

ID: Cnidium21_contig00016701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016701
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532375.1| basic helix-loop-helix-containing protein, p...   144   1e-32
emb|CBI37092.3| unnamed protein product [Vitis vinifera]              143   2e-32
ref|XP_003632423.1| PREDICTED: uncharacterized basic helix-loop-...   141   9e-32
ref|XP_002300784.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|XP_003553489.1| PREDICTED: uncharacterized basic helix-loop-...   123   3e-26

>ref|XP_002532375.1| basic helix-loop-helix-containing protein, putative [Ricinus
           communis] gi|223527931|gb|EEF30018.1| basic
           helix-loop-helix-containing protein, putative [Ricinus
           communis]
          Length = 749

 Score =  144 bits (364), Expect = 1e-32
 Identities = 69/125 (55%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
 Frame = -1

Query: 373 MDNQLCQAFRSLCFNTSWNYAIFWKLNHQVPMVLTLEDACYNNHEHHGLLEIKSSDKAGR 194
           M   L    RSLCFNT W YA+FWKL H+  MVLT EDA YNN E H LLE K   +   
Sbjct: 1   MGTDLHNTLRSLCFNTDWKYAVFWKLKHRTRMVLTWEDAYYNNCEQHDLLENKCFGETFE 60

Query: 193 S-CGGQFPNNSLGLTLAKISSHVYSLGEGVVGQVATTNKHLWISSDKYATDICSSLKYYD 17
           + CGG++ N+ +GL +AK+S HVYSLGEG+VGQVA T KH WI +DK+ T+  SS ++ D
Sbjct: 61  NLCGGRYSNDPVGLAVAKMSYHVYSLGEGIVGQVAVTGKHRWIVADKHVTNSISSFEFSD 120

Query: 16  GWLTQ 2
           GW +Q
Sbjct: 121 GWQSQ 125


>emb|CBI37092.3| unnamed protein product [Vitis vinifera]
          Length = 774

 Score =  143 bits (361), Expect = 2e-32
 Identities = 70/126 (55%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
 Frame = -1

Query: 376 EMDNQLCQAFRSLCFNTSWNYAIFWKLNHQVPMVLTLEDACYNNHEHHGLLEIKSSDKAG 197
           EM   L Q  RSLCFNT W YA+FWKL H+  MVLT EDA Y+NH+ H  LE K   K  
Sbjct: 25  EMATDLQQTLRSLCFNTEWKYAVFWKLKHRARMVLTWEDAYYDNHDQHDPLEDKCFSKTP 84

Query: 196 RSC-GGQFPNNSLGLTLAKISSHVYSLGEGVVGQVATTNKHLWISSDKYATDICSSLKYY 20
            +   G + +++LGL +AK+S HVYSLGEG+VGQVA T KH WI SDK+ T+  SS +Y 
Sbjct: 85  DTLHDGHYSHDALGLAVAKMSYHVYSLGEGIVGQVAVTGKHQWIFSDKHTTNSSSSFEYC 144

Query: 19  DGWLTQ 2
           DGW  Q
Sbjct: 145 DGWQAQ 150


>ref|XP_003632423.1| PREDICTED: uncharacterized basic helix-loop-helix protein
           At1g06150-like [Vitis vinifera]
          Length = 749

 Score =  141 bits (356), Expect = 9e-32
 Identities = 69/125 (55%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
 Frame = -1

Query: 373 MDNQLCQAFRSLCFNTSWNYAIFWKLNHQVPMVLTLEDACYNNHEHHGLLEIKSSDKAGR 194
           M   L Q  RSLCFNT W YA+FWKL H+  MVLT EDA Y+NH+ H  LE K   K   
Sbjct: 1   MATDLQQTLRSLCFNTEWKYAVFWKLKHRARMVLTWEDAYYDNHDQHDPLEDKCFSKTPD 60

Query: 193 SC-GGQFPNNSLGLTLAKISSHVYSLGEGVVGQVATTNKHLWISSDKYATDICSSLKYYD 17
           +   G + +++LGL +AK+S HVYSLGEG+VGQVA T KH WI SDK+ T+  SS +Y D
Sbjct: 61  TLHDGHYSHDALGLAVAKMSYHVYSLGEGIVGQVAVTGKHQWIFSDKHTTNSSSSFEYCD 120

Query: 16  GWLTQ 2
           GW  Q
Sbjct: 121 GWQAQ 125


>ref|XP_002300784.1| predicted protein [Populus trichocarpa] gi|222842510|gb|EEE80057.1|
           predicted protein [Populus trichocarpa]
          Length = 703

 Score =  132 bits (333), Expect = 4e-29
 Identities = 66/125 (52%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
 Frame = -1

Query: 373 MDNQLCQAFRSLCFNTSWNYAIFWKLNHQVPMVLTLEDACYNNHEHHGLLEIKS-SDKAG 197
           M   L    RSLCFNT WNYA+FWKL H+  MVLT ED  Y N E H   E K  S    
Sbjct: 1   MGADLHNTLRSLCFNTDWNYAVFWKLKHRARMVLTWEDGYYENCEQHDAFESKCFSQTQE 60

Query: 196 RSCGGQFPNNSLGLTLAKISSHVYSLGEGVVGQVATTNKHLWISSDKYATDICSSLKYYD 17
           +  GG +  + LGL +AK+S HVYSLGEG+VGQVA + KH WI +DKYA    SS ++ D
Sbjct: 61  KLHGGHYTRDPLGLAVAKMSYHVYSLGEGIVGQVAVSGKHQWIFADKYAASSFSSHEFSD 120

Query: 16  GWLTQ 2
           GW +Q
Sbjct: 121 GWQSQ 125


>ref|XP_003553489.1| PREDICTED: uncharacterized basic helix-loop-helix protein
           At1g06150-like [Glycine max]
          Length = 756

 Score =  123 bits (309), Expect = 3e-26
 Identities = 62/125 (49%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
 Frame = -1

Query: 373 MDNQLCQAFRSLCFNTSWNYAIFWKLNHQVPMVLTLEDACYNNHEHHGLLEIKSSDKAGR 194
           M   L Q   SLC NT WNYAIFWKL H+  M+LT EDA YNN +     E K   K   
Sbjct: 1   MGTNLHQVLGSLCLNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDFDSSENKHCQKTLE 60

Query: 193 SCG-GQFPNNSLGLTLAKISSHVYSLGEGVVGQVATTNKHLWISSDKYATDICSSLKYYD 17
             G G+F +++LGL +AK+S H YSLGEG+VGQVA T KH WI +D        S ++ D
Sbjct: 61  QIGCGKFSHSALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVASSGLSFEFAD 120

Query: 16  GWLTQ 2
           GW +Q
Sbjct: 121 GWQSQ 125


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