BLASTX nr result

ID: Cnidium21_contig00016697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016697
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   146   6e-33
ref|NP_001240211.1| uncharacterized protein LOC100777068 [Glycin...   145   8e-33
ref|NP_001240108.1| uncharacterized protein LOC100790104 [Glycin...   145   8e-33
ref|XP_002525923.1| 60S ribosomal protein L7a, putative [Ricinus...   145   8e-33
ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   145   8e-33

>ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
          Length = 227

 Score =  146 bits (368), Expect = 6e-33
 Identities = 73/116 (62%), Positives = 90/116 (77%), Gaps = 3/116 (2%)
 Frame = +1

Query: 181 MGAVCCCL-CDEPEEFSNLRTSVYRNCLCVRCFVHQLMCVYTSLFRREEQNN-PLAIQGA 354
           MGAVCCC   D+ E++ N  +SVYRNC+C+ CFV   + VY S+FRR E +  P +IQGA
Sbjct: 1   MGAVCCCFNVDDFEDYMNPNSSVYRNCMCLSCFVQNFLTVYESIFRRGEVHAIPSSIQGA 60

Query: 355 SSFSPTSS-DNSLSNMYRSPPRPLPYDADTRYFRSQRDGLVSRREKGSCHSQEEPD 519
           +S + T+S DNSLS+MYRSPPRPLPYDAD R+FRSQR+GLVSRREKGS H  EE +
Sbjct: 61  ASMTSTASLDNSLSDMYRSPPRPLPYDADPRFFRSQREGLVSRREKGSSHLNEESE 116


>ref|NP_001240211.1| uncharacterized protein LOC100777068 [Glycine max]
           gi|255647555|gb|ACU24241.1| unknown [Glycine max]
          Length = 229

 Score =  145 bits (367), Expect = 8e-33
 Identities = 71/116 (61%), Positives = 92/116 (79%), Gaps = 3/116 (2%)
 Frame = +1

Query: 181 MGAVCCCLC-DEPEEFSNLRTSVYRNCLCVRCFVHQLMCVYTSLFRREEQNN-PLAIQGA 354
           MG+VCCCL  D+ E++ N  + VYRNC+C+ C +  L+ VY+S+FRR + ++ P +IQGA
Sbjct: 1   MGSVCCCLSFDDFEDYVNPNSPVYRNCVCLSCLIQNLLSVYSSIFRRGDAHSIPSSIQGA 60

Query: 355 SSFSPTSS-DNSLSNMYRSPPRPLPYDADTRYFRSQRDGLVSRREKGSCHSQEEPD 519
           +S +  +S DNSLS+MYRSPPRPLPYDA+ RYFRSQRDGLVSRREKGS HS EE +
Sbjct: 61  ASITSAASLDNSLSDMYRSPPRPLPYDAEPRYFRSQRDGLVSRREKGSSHSNEETE 116


>ref|NP_001240108.1| uncharacterized protein LOC100790104 [Glycine max]
           gi|255637513|gb|ACU19083.1| unknown [Glycine max]
          Length = 229

 Score =  145 bits (367), Expect = 8e-33
 Identities = 71/116 (61%), Positives = 92/116 (79%), Gaps = 3/116 (2%)
 Frame = +1

Query: 181 MGAVCCCLC-DEPEEFSNLRTSVYRNCLCVRCFVHQLMCVYTSLFRREEQNN-PLAIQGA 354
           MG+VCCCL  D+ E++ N  + VYRNC+C+ C +  L+ VY+S+FRR + ++ P +IQGA
Sbjct: 1   MGSVCCCLSFDDFEDYVNPNSPVYRNCVCLSCLIQNLLIVYSSIFRRGDAHSIPSSIQGA 60

Query: 355 SSFSPTSS-DNSLSNMYRSPPRPLPYDADTRYFRSQRDGLVSRREKGSCHSQEEPD 519
           +S +  +S DNSLS+MYRSPPRPLPYDA+ RYFRSQRDGLVSRREKGS HS EE +
Sbjct: 61  ASITSAASLDNSLSDMYRSPPRPLPYDAEPRYFRSQRDGLVSRREKGSSHSNEETE 116


>ref|XP_002525923.1| 60S ribosomal protein L7a, putative [Ricinus communis]
           gi|223534752|gb|EEF36443.1| 60S ribosomal protein L7a,
           putative [Ricinus communis]
          Length = 570

 Score =  145 bits (367), Expect = 8e-33
 Identities = 74/116 (63%), Positives = 90/116 (77%), Gaps = 3/116 (2%)
 Frame = +1

Query: 181 MGAVCCCL-CDEPEEFSNLRTSVYRNCLCVRCFVHQLMCVYTSLFRREEQNN-PLAIQGA 354
           MGAVCCCL  ++ E++ N  +SVYRNC+C+ CFV   + VY SLFRR E  + P +IQGA
Sbjct: 1   MGAVCCCLHAEDFEDYINPNSSVYRNCMCLSCFVQNFLHVYASLFRRGEVLSVPSSIQGA 60

Query: 355 SSFSPTSS-DNSLSNMYRSPPRPLPYDADTRYFRSQRDGLVSRREKGSCHSQEEPD 519
           +S + ++S DNSLS+MYRSPPRPLPYDAD RYF  QRDGLVSRREKGS HS EE +
Sbjct: 61  ASITSSASLDNSLSDMYRSPPRPLPYDADPRYFHLQRDGLVSRREKGSSHSHEESE 116


>ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Vitis vinifera]
           gi|298204451|emb|CBI16931.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  145 bits (367), Expect = 8e-33
 Identities = 73/116 (62%), Positives = 91/116 (78%), Gaps = 3/116 (2%)
 Frame = +1

Query: 181 MGAVCCCL-CDEPEEFSNLRTSVYRNCLCVRCFVHQLMCVYTSLFRREEQNN-PLAIQGA 354
           MG+VCCCL  ++ +++ N  +S+YRNC+C+ CFV   + VYTSLFRR E N+ P +IQGA
Sbjct: 1   MGSVCCCLRVEDFDDYVNPNSSIYRNCMCLSCFVQNFLNVYTSLFRRGEVNSIPSSIQGA 60

Query: 355 SSFSPTSS-DNSLSNMYRSPPRPLPYDADTRYFRSQRDGLVSRREKGSCHSQEEPD 519
           +S S T+S D+SLS+MYRSPPRPLPYD D R FR QRDGLVSRREKGS HS EE +
Sbjct: 61  ASLSSTTSLDDSLSDMYRSPPRPLPYDVDPRNFRLQRDGLVSRREKGSSHSHEESE 116


Top