BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016687
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548453.1| PREDICTED: uncharacterized protein LOC100817...   131   3e-28
ref|XP_003553352.1| PREDICTED: uncharacterized protein LOC100789...   128   2e-27
ref|NP_182035.2| Cyclin/Brf1-like TBP-binding protein [Arabidops...   112   1e-22
ref|XP_002875067.1| hypothetical protein ARALYDRAFT_346626 [Arab...   112   1e-22
gb|AFW78953.1| hypothetical protein ZEAMMB73_136276 [Zea mays]        105   2e-20

>ref|XP_003548453.1| PREDICTED: uncharacterized protein LOC100817609 [Glycine max]
          Length = 604

 Score =  131 bits (329), Expect = 3e-28
 Identities = 120/390 (30%), Positives = 165/390 (42%), Gaps = 84/390 (21%)
 Frame = -3

Query: 962  TLFIHRYVSVLLKERNLRVCMVALRIVECVKGELMQ--RNVGGLCGAAVYIAALANGIMC 789
            +LFIHRY   LLK  +  V   AL IV  +K + MQ  R   GLCGAA+YI+ALA+GI C
Sbjct: 156  SLFIHRYTKNLLKRGSKAVSDTALAIVASMKRDWMQTGRKPSGLCGAALYISALAHGIKC 215

Query: 788  QKSXXXXXXXXXXXXXRGRLIEFGKTGLEGLTVDEFRRIAKEFEEDKDLELRD-FRGDL- 615
             K                RL+EF  T    LTV+E   +AKE E++  +      +G + 
Sbjct: 216  SKPDILKIVHVCEATLTKRLVEFEDTESSSLTVEELNTMAKEHEKNPTIMPEGGLKGCIS 275

Query: 614  -DVLCRHKDEEA---YCYGLCNVCYKEFVELCKGLGCGSNTRSFDRAKTETL-------- 471
             D+LC HK++     +  GLC  CYK+F +L  GLG G +  +F RA+ E L        
Sbjct: 276  KDLLCEHKEDSGVTHFALGLCEACYKDFDKLSGGLGGGLDPPAFQRAERERLKKTLPEES 335

Query: 470  ------IRECNNDKLGFSK-----------------------KFNXXXXXXXXXXXXXXX 378
                  +   +ND+    K                       K++               
Sbjct: 336  VDEACALANASNDQFKSHKEDLPAYVPESIGANVEHEATKDGKYDDSHREDESETLSDID 395

Query: 377  XXXXEYLGNDEEAEG-KKVLWEVMNKEYIREQVLKKSAAAAG------------------ 255
                +   +DEE +  KK+LWE  N+EY+ EQ  K++AAAA                   
Sbjct: 396  DEEVDLYIHDEEGKHIKKILWETANREYLEEQAAKEAAAAANKKAFEAKFENCSEDILAA 455

Query: 254  --------EAXXXXXXXXXXXRGTKIDN-GPAPASAEATQQTSNKKR----LSSLINVDA 114
                    EA           R  +  N  PA ++AEA  Q SNKKR    L S +N + 
Sbjct: 456  RELAASSIEAVAKSRKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFEL 515

Query: 113  LNELFED-------DAAPNGKKNRTESNHD 45
            LNELF++       D     KK R +S  D
Sbjct: 516  LNELFDEMDTQENTDGLKKQKKVRFDSPLD 545


>ref|XP_003553352.1| PREDICTED: uncharacterized protein LOC100789154 [Glycine max]
          Length = 639

 Score =  128 bits (321), Expect = 2e-27
 Identities = 113/365 (30%), Positives = 157/365 (43%), Gaps = 75/365 (20%)
 Frame = -3

Query: 962  TLFIHRYVSVLLKERNLRVCMVALRIVECVKGELMQ--RNVGGLCGAAVYIAALANGIMC 789
            +LFIHRY   LLK  +  V   AL IV  +K + MQ  R   GLCGAA+YI+ALA+GI C
Sbjct: 196  SLFIHRYTKNLLKRGSKAVSDTALAIVASMKRDWMQTGRKPSGLCGAALYISALAHGIKC 255

Query: 788  QKSXXXXXXXXXXXXXRGRLIEFGKTGLEGLTVDEFRRIAKEFEEDK-DLELRDFRGDL- 615
             K                RL+EF  T    LTV+E   +AKE E++   +     +G + 
Sbjct: 256  SKPDILKIVHVCEATLTKRLVEFEDTESSSLTVEELNTMAKEHEKNSMIMPGGGLKGCIS 315

Query: 614  -DVLCRHKDEEA---YCYGLCNVCYKEFVELCKGLGCGSNTRSFDRAKTETL-------- 471
             D+LC HK++     +  GLC  CYK+F +L  GLG G +  +F RA+ E          
Sbjct: 316  KDLLCEHKEDSGVTHFALGLCEACYKDFDKLSGGLGGGLDPPAFQRAERERFKKTLPEES 375

Query: 470  ------IRECNNDKLGFSK---------------------KFNXXXXXXXXXXXXXXXXX 372
                  +   +ND+    K                     K++                 
Sbjct: 376  VDEACALANASNDQFKSHKEDLHAYVPERANVEHEATKDGKYDDSHREDESETLSDIDDE 435

Query: 371  XXEYLGNDEEAEG-KKVLWEVMNKEYIREQVLKKSAAAA--------------------- 258
              +   +DEE +  KK+LWE  N+EY+ EQ  K++AAAA                     
Sbjct: 436  EVDLYIHDEEGKHIKKLLWETANREYLEEQAAKEAAAAANKKAFEANFENCSEDLLAARE 495

Query: 257  -----GEAXXXXXXXXXXXRGTKIDN-GPAPASAEATQQTSNKKR----LSSLINVDALN 108
                  EA           R  +  N  PA ++AEA  Q SNKKR    L S +N + LN
Sbjct: 496  LAASSAEAVAKSRKEMRQKRAYEAKNTRPAQSAAEAFGQMSNKKRNLQGLKSKVNFELLN 555

Query: 107  ELFED 93
            ELF++
Sbjct: 556  ELFDE 560


>ref|NP_182035.2| Cyclin/Brf1-like TBP-binding protein [Arabidopsis thaliana]
            gi|330255413|gb|AEC10507.1| Cyclin/Brf1-like TBP-binding
            protein [Arabidopsis thaliana]
          Length = 557

 Score =  112 bits (281), Expect = 1e-22
 Identities = 97/338 (28%), Positives = 150/338 (44%), Gaps = 18/338 (5%)
 Frame = -3

Query: 962  TLFIHRYVSVLLK-ERNLRVCMVALRIVECVKGELMQ--RNVGGLCGAAVYIAALANGIM 792
            ++FI R+ ++LLK   N ++ + A  I+  +K + MQ  R   G+CGAA+Y AAL++GI 
Sbjct: 177  SIFIPRFSNMLLKGAHNNKLVLTATHIIASMKRDWMQTGRKPSGICGAALYTAALSHGIK 236

Query: 791  CQKSXXXXXXXXXXXXXRGRLIEFGKTGLEGLTVDEFRRIAKEFEEDKDLELR--DFRGD 618
            C K+               RLIEFG T    LT DE  +  +E E       R  +F  +
Sbjct: 237  CSKTDIVNIVHICEATLTKRLIEFGDTEAASLTADELSKTEREKETAALRSKRKPNFYKE 296

Query: 617  LDVLCRHKDEEAYCYGLCNVCYKEFVELCKGLGCGSNTRSFDRAKTETLIRECNNDKLGF 438
              VLC H+D +   YGLC  CY EF+ +  GL  GS+  +F RA+ E +  + ++++   
Sbjct: 297  GVVLCMHQDCKPVDYGLCESCYDEFMTVSGGLEGGSDPPAFQRAEKERMEEKASSEE--N 354

Query: 437  SKKFN-XXXXXXXXXXXXXXXXXXXEYLGNDEEAEGKKVLWEVMNKEYIREQVLKKSAA- 264
             K+ N                     Y    EE    K+ ++  N  Y  ++  KK+A  
Sbjct: 355  DKQVNLDGHSDESSTLSDVDDRELDCYFRTPEEVRLVKIFFDHENPGYDEKEAAKKAAGL 414

Query: 263  -----------AAGEAXXXXXXXXXXXRGTKIDNGPAPASAEATQQTSNKKRLSSLINVD 117
                       A+  A           R  +  N P PA+      +  K++    IN D
Sbjct: 415  NACNNASNIFEASKAAAAKSRKEKRQQRAEEEKNAPPPATGIEAVDSMVKRKKFRDINCD 474

Query: 116  ALNELFEDDAAPNGKKNRTESNHDTVSWDQEPVEEEIV 3
             L ELF+     + K+++TE    TV   ++  E EIV
Sbjct: 475  YLEELFDASVEKSPKRSKTE----TVMEKKKKEEHEIV 508


>ref|XP_002875067.1| hypothetical protein ARALYDRAFT_346626 [Arabidopsis lyrata subsp.
            lyrata] gi|297320905|gb|EFH51326.1| hypothetical protein
            ARALYDRAFT_346626 [Arabidopsis lyrata subsp. lyrata]
          Length = 532

 Score =  112 bits (280), Expect = 1e-22
 Identities = 97/339 (28%), Positives = 156/339 (46%), Gaps = 21/339 (6%)
 Frame = -3

Query: 962  TLFIHRYVSVLLK-----ERNL--RVCMVALRIVECVKGELMQ--RNVGGLCGAAVYIAA 810
            ++FI ++++ LLK      +N+  +V   A  I+  +K + MQ  R   G+CGAA+YIAA
Sbjct: 177  SIFIPQFMNNLLKGAHNIAKNVLDKVLGTATNIISSMKRDWMQTGRKPSGICGAAIYIAA 236

Query: 809  LANGIMCQKSXXXXXXXXXXXXXRGRLIEFGKTGLEGLTVDEFRRIAKEFEEDKDLELRD 630
            L++GIMC ++               RL EF  T    LTVDE  + ++    +K    R 
Sbjct: 237  LSHGIMCSRADIAKIVHMCEATITKRLDEFANTEAASLTVDELDK-SENILREKPFSPRP 295

Query: 629  FRGDLDVLCRHKDEEAYCYGLCNVCYKEFVELCKGLGCGSNTRSFDRAKTETLIRECNND 450
               +  V C+HKD + + +GLC  C+  F+++  G+  GS+  +F RA+ E + +    +
Sbjct: 296  NSDEGVVNCKHKDLKRFGFGLCKSCHDAFMKISGGVVGGSDPPAFQRAEKERMEKAAREE 355

Query: 449  KLGFSKKFNXXXXXXXXXXXXXXXXXXXEYLGNDEEAEG----------KKVLWEVMNKE 300
              G  +K                       L  D E +G           K+ WE+ N++
Sbjct: 356  NEGAIEKSEGETDWDAEAPDESGNLSD---LDGDAEVDGCFLNEDEKLMTKISWELDNRD 412

Query: 299  YIREQVLKKSAAAAGEAXXXXXXXXXXXRGTKIDNGPAPASA-EATQQTSNKKRLSSLIN 123
            Y+   +         EA           R  +  N P PA+A EA ++   +KRLS  IN
Sbjct: 413  YLEVNL---------EAVAKSRKEKRQKRAEEAKNAPPPATAMEAVRRIVKRKRLSG-IN 462

Query: 122  VDALNELFED-DAAPNGKKNRTESNHDTVSWDQEPVEEE 9
             D L+EL ++  A  + KK RTE+  +    + E VE+E
Sbjct: 463  CDFLDELLDNVPAEKSQKKPRTETVTEKKKEEHEIVEDE 501


>gb|AFW78953.1| hypothetical protein ZEAMMB73_136276 [Zea mays]
          Length = 515

 Score =  105 bits (261), Expect = 2e-20
 Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
 Frame = -3

Query: 962 TLFIHRYVSVLLKERNLRVCMVALRIVECVKGELMQ--RNVGGLCGAAVYIAALANGIMC 789
           +LFIHR+  +LL  RN  V   ALRIV  +K + MQ  R   GLCGAA+YIAAL++G   
Sbjct: 112 SLFIHRFTKLLLGRRNNDVSDTALRIVASMKRDWMQTGRKPSGLCGAALYIAALSHGCNY 171

Query: 788 QKSXXXXXXXXXXXXXRGRLIEFGKTGLEGLTVDEFRRIAKEFEEDKDLELRDFRGDLDV 609
            K+               RLIEF  T    LT++EF   A E  E+   +     G+  +
Sbjct: 172 TKADIVSVVHVCEATLTKRLIEFENTDSGSLTIEEFLATADESNEEPVSKHSPKSGE--I 229

Query: 608 LCRHKDE--EAYCYGLCNVCYKEFVELCKGLGCGSNTRSFDRAKTETL 471
           LC+HKD+  E + +GLC  CY +F +L  GL  GS+  +F RA+ + L
Sbjct: 230 LCKHKDKGFEHFAHGLCEKCYNKFTKLSGGLEGGSDPPAFQRAEKKRL 277



 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
 Frame = -3

Query: 362 YLGNDEEAEGKKVLWEVMNKEYIREQVLKKS----AAAAGEAXXXXXXXXXXXRGTKIDN 195
           YL N+EE + KK++WE MNKEY+ EQ  K++     AA G              GTK  +
Sbjct: 366 YLHNEEETQYKKIIWEEMNKEYLEEQAAKEALAAELAARGIDPEAGKKKRKRNEGTK-SS 424

Query: 194 GPAPASAEATQQTSNKKRLSSLINVDALNELFEDDAAPNGKKNRTESNHDTV 39
            PA   AEAT     +K L S INV A++EL++         N  E   D +
Sbjct: 425 TPAETPAEATCNMLKRKGLGSKINVGAVDELYKTKDEVGSANNEEEMEFDAL 476