BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016685
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]      272   6e-71
gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]            250   3e-64
dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]           250   3e-64
emb|CAJ38367.1| polyA-binding protein [Plantago major]                244   2e-62
ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [...   240   3e-61

>gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
          Length = 658

 Score =  272 bits (696), Expect = 6e-71
 Identities = 143/220 (65%), Positives = 153/220 (69%), Gaps = 3/220 (1%)
 Frame = +1

Query: 1    QQLFYGQGPPAIFPSQAGFGYQQQMVPGMRPGGAPIPNFYMPMVXXXXXXXXXXXXXXXX 180
            QQLFYGQ PPA+   QAGFGYQQQ+VPGMRPGG P+PNF+MPMV                
Sbjct: 439  QQLFYGQAPPAMIAPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGGRRGAG 498

Query: 181  XXXXXXXXXXXXXXX---RGRMYRFPPGRNVGDVTMPGVGGGVLPIPYDMGSALHRDAVP 351
                              RGRMYRFPPGRNVGDVTMPGVGGG+LP+PY+MG  L R+A  
Sbjct: 499  PAQQTQQPVPMMPQQLMPRGRMYRFPPGRNVGDVTMPGVGGGMLPVPYNMGGMLPREAAM 558

Query: 352  IHXXXXXXXXXXXXXXXXDQQRTMLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLL 531
                              DQQRTMLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLL
Sbjct: 559  GQPMPITALASALANAPADQQRTMLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLL 618

Query: 532  ESPDALKAKVGEAMDVLKNVSQTNSAEQLANLSLNENLVS 651
            ESPDALKAKV EAMDVL+NVSQ N A+QL  LSLNENLVS
Sbjct: 619  ESPDALKAKVAEAMDVLRNVSQPNVADQLGGLSLNENLVS 658


>gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
          Length = 479

 Score =  250 bits (638), Expect = 3e-64
 Identities = 133/221 (60%), Positives = 152/221 (68%), Gaps = 4/221 (1%)
 Frame = +1

Query: 1   QQLFYGQGPPAIFPSQAGFGYQQQMVPGMRPGGAPIPNFYMPMVXXXXXXXXXXXXXXXX 180
           QQLFYGQGPPA+ P QAGFGYQQQ+VPGMRPGGAP+PNF+MP+V                
Sbjct: 259 QQLFYGQGPPAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFMPLVQQGQQGQRPGGRRGAG 318

Query: 181 XXXXXXXXXXXXXXX---RGRMYRFPPGRNVGDVTMPGVGGGVLPIPYDMGSALHRDAVP 351
                             RGRMYR+PPGRN  +  MPGV GG+L +PYDMG  L RD+  
Sbjct: 319 PVQQTQQPMPLMQQQMLPRGRMYRYPPGRNGPEGPMPGVPGGMLSVPYDMGGMLPRDSAM 378

Query: 352 IHXXXXXXXXXXXXXXXXDQQRTMLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLL 531
                             +QQRTMLGE+LYPLVDQLEH+HAAKVTGMLLEMDQTEVLHLL
Sbjct: 379 GQPMPISTLASALANAPPEQQRTMLGESLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLL 438

Query: 532 ESPDALKAKVGEAMDVLKNVSQ-TNSAEQLANLSLNENLVS 651
           ESP+ALKAKV EAM+VL+NV Q TN A+QLA+LSLN+NLVS
Sbjct: 439 ESPEALKAKVAEAMEVLRNVQQTTNPADQLASLSLNDNLVS 479


>dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
          Length = 657

 Score =  250 bits (638), Expect = 3e-64
 Identities = 133/221 (60%), Positives = 152/221 (68%), Gaps = 4/221 (1%)
 Frame = +1

Query: 1    QQLFYGQGPPAIFPSQAGFGYQQQMVPGMRPGGAPIPNFYMPMVXXXXXXXXXXXXXXXX 180
            QQLFYGQGPPA+ P QAGFGYQQQ+VPGMRPGGAP+PNF+MP+V                
Sbjct: 437  QQLFYGQGPPAMIPPQAGFGYQQQLVPGMRPGGAPMPNFFMPLVQQGQQGQRPGGRRGAG 496

Query: 181  XXXXXXXXXXXXXXX---RGRMYRFPPGRNVGDVTMPGVGGGVLPIPYDMGSALHRDAVP 351
                              RGRMYR+PPGRN  +  MPGV GG+L +PYDMG  L RD+  
Sbjct: 497  PVQQTQQPMPLMQQQMLPRGRMYRYPPGRNGPEGPMPGVPGGMLSVPYDMGGMLPRDSAM 556

Query: 352  IHXXXXXXXXXXXXXXXXDQQRTMLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLL 531
                              +QQRTMLGE+LYPLVDQLEH+HAAKVTGMLLEMDQTEVLHLL
Sbjct: 557  GQPMPISTLASALANAPPEQQRTMLGESLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLL 616

Query: 532  ESPDALKAKVGEAMDVLKNVSQ-TNSAEQLANLSLNENLVS 651
            ESP+ALKAKV EAM+VL+NV Q TN A+QLA+LSLN+NLVS
Sbjct: 617  ESPEALKAKVAEAMEVLRNVQQTTNPADQLASLSLNDNLVS 657


>emb|CAJ38367.1| polyA-binding protein [Plantago major]
          Length = 314

 Score =  244 bits (623), Expect = 2e-62
 Identities = 135/224 (60%), Positives = 150/224 (66%), Gaps = 7/224 (3%)
 Frame = +1

Query: 1   QQLFYGQGPPAIFPSQAGFGYQQQMVPGMRPGGAPIPNFYMPMVXXXXXXXXXXXXXXXX 180
           QQLFYGQGPPA+ PSQAGFGYQQQ+VPGMRPGG P+PNF+MPMV                
Sbjct: 93  QQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGGTPMPNFFMPMVQQGQQGQRPGGRRGGG 152

Query: 181 XXXXXXXXXXXXXXX---RGRMYRFPPGRNVGDVTMPGVGGGVLPIPYDMGSALHRDAVP 351
                             RGRMYRFPPGRNV DV M   GGG+  +PYDM   L RDA  
Sbjct: 153 PMQQAQQPVPVMQQQMMPRGRMYRFPPGRNVPDVPM--TGGGMFSVPYDMTGMLPRDAAA 210

Query: 352 I-HXXXXXXXXXXXXXXXXDQQRTMLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHL 528
           I                  +QQRTMLGENLYPLVDQLEH+HAAKVTGMLLEMDQTEVLHL
Sbjct: 211 IPQPMPVTALASALANATPEQQRTMLGENLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHL 270

Query: 529 LESPDALKAKVGEAMDVLKNVSQ---TNSAEQLANLSLNENLVS 651
           LESPDALK+KV EAM+VL+NV Q    + A+QLA+LSLN+NLVS
Sbjct: 271 LESPDALKSKVNEAMEVLRNVQQQGNNSPADQLASLSLNDNLVS 314


>ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
            gi|147773643|emb|CAN76464.1| hypothetical protein
            VITISV_017035 [Vitis vinifera]
          Length = 640

 Score =  240 bits (613), Expect = 3e-61
 Identities = 130/223 (58%), Positives = 149/223 (66%), Gaps = 7/223 (3%)
 Frame = +1

Query: 1    QQLFYGQGPPAIFPSQAGFGYQQQMVPGMRPGGAPIPNFYMPMVXXXXXXXXXXXXXXXX 180
            QQLFYGQGPPAI P QAGFGYQQQ+VPGMRPGGAP+PNF++P+V                
Sbjct: 417  QQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQRPGGRRGAG 476

Query: 181  XXXXXXXXXXXXXXXR----GRMYRFPPGRNVGDVTMPGVGGGVLPIPYDMGSALHRDAV 348
                                GR+YR+PPGRN+ DV MPGV GG+L IPYDMG    RDA 
Sbjct: 477  PVQQNQQPVPLMQQQMLPRGGRVYRYPPGRNMPDVPMPGVAGGMLSIPYDMGGVPLRDAA 536

Query: 349  PIHXXXXXXXXXXXXXXXXDQQRTMLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHL 528
                               DQQRTMLGE+LYPLVDQLEH+ AAKVTGMLLEMDQTEVLHL
Sbjct: 537  IGQPMPISALASALANATPDQQRTMLGESLYPLVDQLEHEMAAKVTGMLLEMDQTEVLHL 596

Query: 529  LESPDALKAKVGEAMDVLKNVSQ---TNSAEQLANLSLNENLV 648
            LESP+ALK+KV EAMDVL+NV+Q    +  EQLA+LSLN++LV
Sbjct: 597  LESPEALKSKVAEAMDVLRNVAQQQANSPTEQLASLSLNDSLV 639