BLASTX nr result

ID: Cnidium21_contig00016652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016652
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA33067.1| MYB1 [Gossypium hirsutum] gi|23476277|gb|AAN28269...   233   1e-59
gb|AAN28272.1| myb-like transcription factor 1 [Gossypium herbac...   233   1e-59
gb|AAN28270.1| myb-like transcription factor 1 [Gossypium hirsutum]   233   2e-59
gb|AAN28271.1| myb-like transcription factor 1 [Gossypium raimon...   233   2e-59
gb|AAN28273.1| myb-like transcription factor 1 [Gossypioides kir...   233   2e-59

>gb|AAA33067.1| MYB1 [Gossypium hirsutum] gi|23476277|gb|AAN28269.1| myb-like
           transcription factor 1 [Gossypium hirsutum]
          Length = 294

 Score =  233 bits (595), Expect = 1e-59
 Identities = 123/186 (66%), Positives = 133/186 (71%), Gaps = 4/186 (2%)
 Frame = -1

Query: 550 LINYIRRHGEGCWRSLPTSAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSV 371
           LINYIR HGEGCWRSLP +AGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHS+
Sbjct: 25  LINYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSL 84

Query: 370 LGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGLDPQTHRPLNXXXXXXXXXXXXXX 191
           LGNKWSLIA RLPGRTDNEIKNYWNTHIKRKLISRG+DPQTHRPLN              
Sbjct: 85  LGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLISRGIDPQTHRPLNQTANTNTVTAP--- 141

Query: 190 AIPIKSLDFRNNTQTVPLEIPTQNIIPLPNNTILKFK--TESAEEGNC--SSSTTEETQH 23
                 LDFRN+  +V      +N     N    +FK  T+S EE NC  SS  T + + 
Sbjct: 142 ----TELDFRNSPTSVSKSSSIKNPSLDFNYNEFQFKSNTDSLEEPNCTASSGMTTDEEQ 197

Query: 22  QEYYHK 5
           QE  HK
Sbjct: 198 QEQLHK 203


>gb|AAN28272.1| myb-like transcription factor 1 [Gossypium herbaceum]
          Length = 265

 Score =  233 bits (595), Expect = 1e-59
 Identities = 123/186 (66%), Positives = 133/186 (71%), Gaps = 4/186 (2%)
 Frame = -1

Query: 550 LINYIRRHGEGCWRSLPTSAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSV 371
           LINYIR HGEGCWRSLP +AGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHS+
Sbjct: 8   LINYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSL 67

Query: 370 LGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGLDPQTHRPLNXXXXXXXXXXXXXX 191
           LGNKWSLIA RLPGRTDNEIKNYWNTHIKRKLISRG+DPQTHRPLN              
Sbjct: 68  LGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLISRGIDPQTHRPLNQTANTNTVTAP--- 124

Query: 190 AIPIKSLDFRNNTQTVPLEIPTQNIIPLPNNTILKFK--TESAEEGNC--SSSTTEETQH 23
                 LDFRN+  +V      +N     N    +FK  T+S EE NC  SS  T + + 
Sbjct: 125 ----TELDFRNSPTSVSKSSSIKNPSLDFNYNEFQFKSNTDSLEEPNCTASSGMTTDEEQ 180

Query: 22  QEYYHK 5
           QE  HK
Sbjct: 181 QEQLHK 186


>gb|AAN28270.1| myb-like transcription factor 1 [Gossypium hirsutum]
          Length = 294

 Score =  233 bits (594), Expect = 2e-59
 Identities = 123/186 (66%), Positives = 132/186 (70%), Gaps = 4/186 (2%)
 Frame = -1

Query: 550 LINYIRRHGEGCWRSLPTSAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSV 371
           LINYIR HGEGCWRSLP +AGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHS+
Sbjct: 25  LINYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSL 84

Query: 370 LGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGLDPQTHRPLNXXXXXXXXXXXXXX 191
           LGNKWSLIA RLPGRTDNEIKNYWNTHIKRKLISRG+DPQTHRPLN              
Sbjct: 85  LGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLISRGIDPQTHRPLNQTANTNTVTAP--- 141

Query: 190 AIPIKSLDFRNNTQTVPLEIPTQNIIPLPNNTILKFK--TESAEEGNC--SSSTTEETQH 23
                 LDFRN   +V      +N     N    +FK  T+S EE NC  SS  T + + 
Sbjct: 142 ----TELDFRNTPTSVSKSSSIKNPSLDFNYNEFQFKSNTDSLEEPNCTTSSGMTTDEEQ 197

Query: 22  QEYYHK 5
           QE  HK
Sbjct: 198 QEQLHK 203


>gb|AAN28271.1| myb-like transcription factor 1 [Gossypium raimondii]
          Length = 268

 Score =  233 bits (593), Expect = 2e-59
 Identities = 123/190 (64%), Positives = 132/190 (69%), Gaps = 8/190 (4%)
 Frame = -1

Query: 550 LINYIRRHGEGCWRSLPTSAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSV 371
           LINYIR HGEGCWRSLP +AGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHS+
Sbjct: 11  LINYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSL 70

Query: 370 LGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGLDPQTHRPLNXXXXXXXXXXXXXX 191
           LGNKWSLIA RLPGRTDNEIKNYWNTHIKRKLISRG+DPQTHRPLN              
Sbjct: 71  LGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLISRGIDPQTHRPLNQTANTNTVTAP--- 127

Query: 190 AIPIKSLDFRNNTQTVPLEIPTQNIIPLP------NNTILKFKTESAEEGNC--SSSTTE 35
                 LDFRN    +P  +   + I  P      N    K  T+S EE NC  SS  T 
Sbjct: 128 ----TELDFRN----MPTSVSKSSSIKNPSLDFNYNEFQFKSNTDSLEEPNCTASSGMTT 179

Query: 34  ETQHQEYYHK 5
           + + QE  HK
Sbjct: 180 DEEQQEQLHK 189


>gb|AAN28273.1| myb-like transcription factor 1 [Gossypioides kirkii]
          Length = 263

 Score =  233 bits (593), Expect = 2e-59
 Identities = 121/184 (65%), Positives = 130/184 (70%), Gaps = 2/184 (1%)
 Frame = -1

Query: 550 LINYIRRHGEGCWRSLPTSAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSV 371
           LI+YIR HGEGCWRSLP +AGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHS+
Sbjct: 10  LIDYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSL 69

Query: 370 LGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGLDPQTHRPLNXXXXXXXXXXXXXX 191
           LGNKWSLIA RLPGRTDNEIKNYWNTHIKRKLISRG+DPQTHRPLN              
Sbjct: 70  LGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLISRGIDPQTHRPLNQTANTNTVTAP--- 126

Query: 190 AIPIKSLDFRNNTQTVPLEIPTQNIIPLPNNTILKFKTESAEEGNC--SSSTTEETQHQE 17
                 LDFRN   +V      +N     N    K  T+S EE NC  SS  T + + QE
Sbjct: 127 ----TELDFRNTPTSVSKSSSIKNPNFNYNEFQFKSNTDSLEEPNCTASSGMTTDEEQQE 182

Query: 16  YYHK 5
             HK
Sbjct: 183 QLHK 186


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