BLASTX nr result

ID: Cnidium21_contig00016643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016643
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24753.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_004159095.1| PREDICTED: LOW QUALITY PROTEIN: general tran...    64   2e-08
ref|XP_004142476.1| PREDICTED: general transcription factor 3C p...    64   2e-08

>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
 Frame = -3

Query: 479 NTYDELDLAGDS---SLQPSSYTGQQNISKDYLQELFGSFPISDGGGVVMADAANSDDEY 309
           + Y+ LD+ G+    SLQ  SY   +NIS+DYLQ LFGSF  +  GG  + DA  SD EY
Sbjct: 521 DAYEALDMVGEDDEDSLQSRSYLDAENISRDYLQGLFGSFSFTKAGGGEVQDADTSDGEY 580

Query: 308 PIYEQYSDINYSTD 267
            IYEQ S   YS D
Sbjct: 581 QIYEQDSLGEYSDD 594


>ref|XP_004159095.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
           polypeptide 5-like [Cucumis sativus]
          Length = 592

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
 Frame = -3

Query: 479 NTYDELDLAGDS---SLQPSSYTGQQNISKDYLQELFGSFP-ISDGGGVVMADAANSDDE 312
           + YD+ ++ GD    SL   SY G +++S+ +LQELFGSFP + + G  +M D   SD+E
Sbjct: 516 DAYDDFNMVGDDDEFSLHSHSYLGMEDVSRTHLQELFGSFPSLDEDGEKMMDDGDGSDEE 575

Query: 311 YPIYEQYSDINYSTD 267
           Y IYEQ +D++   D
Sbjct: 576 YQIYEQDTDMDSDED 590


>ref|XP_004142476.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           [Cucumis sativus]
          Length = 556

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
 Frame = -3

Query: 479 NTYDELDLAGDS---SLQPSSYTGQQNISKDYLQELFGSFP-ISDGGGVVMADAANSDDE 312
           + YD+ ++ GD    SL   SY G +++S+ +LQELFGSFP + + G  +M D   SD+E
Sbjct: 480 DAYDDFNMVGDDDEFSLHSHSYLGMEDVSRTHLQELFGSFPSLDEDGEKMMDDGDGSDEE 539

Query: 311 YPIYEQYSDINYSTD 267
           Y IYEQ +D++   D
Sbjct: 540 YQIYEQDTDMDSDED 554


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