BLASTX nr result

ID: Cnidium21_contig00016572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016572
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315071.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
gb|ABK95756.1| unknown [Populus trichocarpa]                          162   3e-38
ref|XP_002312235.1| predicted protein [Populus trichocarpa] gi|2...   161   5e-38
ref|XP_002513328.1| glyceraldehyde 3-phosphate dehydrogenase, pu...   160   8e-38
ref|XP_002263263.1| PREDICTED: glyceraldehyde-3-phosphate dehydr...   158   5e-37

>ref|XP_002315071.1| predicted protein [Populus trichocarpa] gi|222864111|gb|EEF01242.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  162 bits (409), Expect = 3e-38
 Identities = 85/109 (77%), Positives = 89/109 (81%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLHGILGYTXXXXXXXXXX 182
           LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPL GILGYT          
Sbjct: 312 LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLKGILGYTDDDVVSSDFL 371

Query: 183 XXXXXXLFDAQAGMGLSASFMKLVSWYDDEWGYSNRVLDL---MALVAA 320
                 +FDA+AG+GLSASFMKLVSWYD+EWGYSNRVLDL   MALVAA
Sbjct: 372 GDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMALVAA 420


>gb|ABK95756.1| unknown [Populus trichocarpa]
          Length = 422

 Score =  162 bits (409), Expect = 3e-38
 Identities = 85/109 (77%), Positives = 89/109 (81%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLHGILGYTXXXXXXXXXX 182
           LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPL GILGYT          
Sbjct: 312 LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLKGILGYTDDDVVSSDFL 371

Query: 183 XXXXXXLFDAQAGMGLSASFMKLVSWYDDEWGYSNRVLDL---MALVAA 320
                 +FDA+AG+GLSASFMKLVSWYD+EWGYSNRVLDL   MALVAA
Sbjct: 372 GDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMALVAA 420


>ref|XP_002312235.1| predicted protein [Populus trichocarpa] gi|222852055|gb|EEE89602.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  161 bits (408), Expect = 5e-38
 Identities = 85/109 (77%), Positives = 89/109 (81%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLHGILGYTXXXXXXXXXX 182
           LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPL GILGYT          
Sbjct: 312 LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLMGILGYTDDDVVSNDFV 371

Query: 183 XXXXXXLFDAQAGMGLSASFMKLVSWYDDEWGYSNRVLDL---MALVAA 320
                 +FDA+AG+GLSASFMKLVSWYD+EWGYSNRVLDL   MALVAA
Sbjct: 372 GDSRSSIFDAKAGIGLSASFMKLVSWYDNEWGYSNRVLDLIEHMALVAA 420


>ref|XP_002513328.1| glyceraldehyde 3-phosphate dehydrogenase, putative [Ricinus
           communis] gi|223547236|gb|EEF48731.1| glyceraldehyde
           3-phosphate dehydrogenase, putative [Ricinus communis]
          Length = 426

 Score =  160 bits (406), Expect = 8e-38
 Identities = 84/109 (77%), Positives = 89/109 (81%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLHGILGYTXXXXXXXXXX 182
           LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPL GILGYT          
Sbjct: 316 LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLKGILGYTDEDVVSNDFV 375

Query: 183 XXXXXXLFDAQAGMGLSASFMKLVSWYDDEWGYSNRVLDL---MALVAA 320
                 +FDA+AG+GLSA+FMKLVSWYD+EWGYSNRVLDL   MALVAA
Sbjct: 376 GDSRSSIFDAKAGIGLSAAFMKLVSWYDNEWGYSNRVLDLIEHMALVAA 424


>ref|XP_002263263.1| PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic
           [Vitis vinifera] gi|297736130|emb|CBI24168.3| unnamed
           protein product [Vitis vinifera]
          Length = 429

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/110 (73%), Positives = 90/110 (81%), Gaps = 3/110 (2%)
 Frame = +3

Query: 3   LTGMAFRVPTPNVSVVDLTCRLEKSASYEDVKAAIKYASEGPLHGILGYTXXXXXXXXXX 182
           LTGMAFRVPTPNVSVVDLTCRL+KSA+YEDVKAA+KYASEGPL GILGYT          
Sbjct: 319 LTGMAFRVPTPNVSVVDLTCRLKKSATYEDVKAAVKYASEGPLKGILGYTDEDVVSNDFV 378

Query: 183 XXXXXXLFDAQAGMGLSASFMKLVSWYDDEWGYSNRVLDL---MALVAAT 323
                 +FDA+AG+GLSASFMKLV+WYD+EWGYSNRVLDL   MALVAA+
Sbjct: 379 GDSRSSIFDAKAGIGLSASFMKLVAWYDNEWGYSNRVLDLIEHMALVAAS 428


Top