BLASTX nr result

ID: Cnidium21_contig00016562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016562
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77522.1| unknown [Picea sitchensis]                              66   5e-16
ref|XP_001767034.1| BAH-PHD domain-containing protein [Physcomit...    59   2e-12
ref|XP_002263493.1| PREDICTED: chromatin structure-remodeling co...    55   2e-12
ref|XP_002512960.1| phd finger transcription factor, putative [R...    55   2e-12
emb|CBI38025.3| unnamed protein product [Vitis vinifera]               55   2e-12

>gb|ADE77522.1| unknown [Picea sitchensis]
          Length = 214

 Score = 65.9 bits (159), Expect(2) = 5e-16
 Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
 Frame = +3

Query: 363 DSKEGRLPFHG--DI*FWKH--NCSVCSNRNWKVVHTLEEYSGLENGVTEDDFFSRFHYD 530
           DSK GR  FHG  ++    H    SV +  +  VVH+ + YS LE+ V  +D+F RF Y 
Sbjct: 68  DSKAGRRQFHGAKELFLSDHYDTQSVNTIEDTCVVHSFKNYSNLES-VASEDYFCRFEYT 126

Query: 531 HINGVYNPEATEVYCTCEMPSNRTSL 608
            I G +NP+   VYCTCEMP N   L
Sbjct: 127 PITGYFNPDRVPVYCTCEMPYNPDDL 152



 Score = 45.1 bits (105), Expect(2) = 5e-16
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +2

Query: 599 DELMVECEICTDWFHPWCIGLDYSEA 676
           D+LMV+CE C +WFHP CIG+  +EA
Sbjct: 150 DDLMVQCEACKEWFHPECIGISIAEA 175


>ref|XP_001767034.1| BAH-PHD domain-containing protein [Physcomitrella patens subsp.
           patens] gi|162681776|gb|EDQ68200.1| BAH-PHD
           domain-containing protein [Physcomitrella patens subsp.
           patens]
          Length = 189

 Score = 58.5 bits (140), Expect(2) = 2e-12
 Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
 Frame = +3

Query: 363 DSKEGRLPFHGDI*-FWKHNCSVCSNR---NWKVVHTLEEYSGLENGVTEDDFFSRFHYD 530
           +S  GR  FHG    F   +  VCS     N   +HT ++Y+ LE+ V  DD+F RF Y+
Sbjct: 68  ESAGGRRQFHGSKELFLSDHYDVCSPEAVENKCTIHTFKDYTRLED-VGTDDYFCRFDYN 126

Query: 531 HINGVYNPEATEVYCTCEMPSNRTSL 608
             +G ++P+   VYC CEMP N   L
Sbjct: 127 ARSGTFSPDRVAVYCKCEMPYNPDDL 152



 Score = 40.4 bits (93), Expect(2) = 2e-12
 Identities = 18/33 (54%), Positives = 22/33 (66%)
 Frame = +2

Query: 599 DELMVECEICTDWFHPWCIGLDYSEATLNVLEY 697
           D+LMV+CE C DWFHP C+ L  SE   NV  +
Sbjct: 150 DDLMVQCENCKDWFHPKCVMLS-SEDIKNVKNF 181


>ref|XP_002263493.1| PREDICTED: chromatin structure-remodeling complex subunit RSC1-like
           [Vitis vinifera]
          Length = 224

 Score = 55.1 bits (131), Expect(2) = 2e-12
 Identities = 25/52 (48%), Positives = 31/52 (59%)
 Frame = +3

Query: 453 VHTLEEYSGLENGVTEDDFFSRFHYDHINGVYNPEATEVYCTCEMPSNRTSL 608
           VHT + Y+ L+  V  DDFF RF Y+   G +NP+   VYC CEMP N   L
Sbjct: 111 VHTFKSYTKLD-AVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDL 161



 Score = 43.5 bits (101), Expect(2) = 2e-12
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +2

Query: 599 DELMVECEICTDWFHPWCIGLDYSEA 676
           D+LMV+CE CTDWFHP CI +   EA
Sbjct: 159 DDLMVQCEGCTDWFHPACIDMTPEEA 184


>ref|XP_002512960.1| phd finger transcription factor, putative [Ricinus communis]
           gi|223547971|gb|EEF49463.1| phd finger transcription
           factor, putative [Ricinus communis]
          Length = 216

 Score = 54.7 bits (130), Expect(2) = 2e-12
 Identities = 25/52 (48%), Positives = 31/52 (59%)
 Frame = +3

Query: 453 VHTLEEYSGLENGVTEDDFFSRFHYDHINGVYNPEATEVYCTCEMPSNRTSL 608
           VH+ + Y+ LE  V  DDFF RF Y+   G +NP+   VYC CEMP N   L
Sbjct: 103 VHSFKNYTRLE-AVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDL 153



 Score = 43.9 bits (102), Expect(2) = 2e-12
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +2

Query: 599 DELMVECEICTDWFHPWCIGLDYSEA 676
           D+LMV+CE CTDWFHP CI +   EA
Sbjct: 151 DDLMVQCEGCTDWFHPTCIEMTAEEA 176


>emb|CBI38025.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score = 55.1 bits (131), Expect(2) = 2e-12
 Identities = 25/52 (48%), Positives = 31/52 (59%)
 Frame = +3

Query: 453 VHTLEEYSGLENGVTEDDFFSRFHYDHINGVYNPEATEVYCTCEMPSNRTSL 608
           VHT + Y+ L+  V  DDFF RF Y+   G +NP+   VYC CEMP N   L
Sbjct: 102 VHTFKSYTKLD-AVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDL 152



 Score = 43.5 bits (101), Expect(2) = 2e-12
 Identities = 17/26 (65%), Positives = 20/26 (76%)
 Frame = +2

Query: 599 DELMVECEICTDWFHPWCIGLDYSEA 676
           D+LMV+CE CTDWFHP CI +   EA
Sbjct: 150 DDLMVQCEGCTDWFHPACIDMTPEEA 175


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