BLASTX nr result

ID: Cnidium21_contig00016557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016557
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplasti...   144   6e-33
gb|ABK95780.1| unknown [Populus trichocarpa]                          144   1e-32
ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplasti...   142   2e-32
ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ri...   140   1e-31
gb|AFK38166.1| unknown [Medicago truncatula]                          139   3e-31

>ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplastic [Vitis vinifera]
           gi|297735420|emb|CBI17860.3| unnamed protein product
           [Vitis vinifera]
          Length = 237

 Score =  144 bits (364), Expect = 6e-33
 Identities = 75/88 (85%), Positives = 81/88 (92%)
 Frame = -2

Query: 266 RHLLRFHLTRPRTQQTAGIVLLPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGL 87
           RHLL     R ++++ AGI++LPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGL
Sbjct: 58  RHLLGCCSRRVQSRR-AGILVLPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGL 116

Query: 86  VVVLKLQGACGSCPSSTMTLKMGIETRL 3
           VVVLKLQGACGSCPSSTMTLKMGIETRL
Sbjct: 117 VVVLKLQGACGSCPSSTMTLKMGIETRL 144


>gb|ABK95780.1| unknown [Populus trichocarpa]
          Length = 224

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/88 (82%), Positives = 78/88 (88%)
 Frame = -2

Query: 266 RHLLRFHLTRPRTQQTAGIVLLPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGL 87
           RH L F L R R + T G+V+ PSCVLPLTEENVEKVLDEVRPGLM DGGNVALHEIDGL
Sbjct: 46  RHFLHFKLNRGRMKCT-GVVVSPSCVLPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGL 104

Query: 86  VVVLKLQGACGSCPSSTMTLKMGIETRL 3
           VVVLKLQGACGSCPSS+MTLKMGIET+L
Sbjct: 105 VVVLKLQGACGSCPSSSMTLKMGIETKL 132


>ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Cucumis
           sativus] gi|449510563|ref|XP_004163700.1| PREDICTED:
           nifU-like protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 227

 Score =  142 bits (359), Expect = 2e-32
 Identities = 73/88 (82%), Positives = 78/88 (88%)
 Frame = -2

Query: 266 RHLLRFHLTRPRTQQTAGIVLLPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGL 87
           RH LRF+ +  R +   G V+ PSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGL
Sbjct: 49  RHFLRFNSSCTRIRHL-GNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGL 107

Query: 86  VVVLKLQGACGSCPSSTMTLKMGIETRL 3
           VV+LKLQGACGSCPSSTMTLKMGIETRL
Sbjct: 108 VVILKLQGACGSCPSSTMTLKMGIETRL 135


>ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223528244|gb|EEF30298.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 220

 Score =  140 bits (353), Expect = 1e-31
 Identities = 72/88 (81%), Positives = 76/88 (86%)
 Frame = -2

Query: 266 RHLLRFHLTRPRTQQTAGIVLLPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGL 87
           RH     L R   ++ AG+V+ PSCVLPLTEENVEKVLDEVRPGLMADGGNV LHEIDGL
Sbjct: 42  RHFSSIKLNRA-PRKFAGLVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVVLHEIDGL 100

Query: 86  VVVLKLQGACGSCPSSTMTLKMGIETRL 3
           VVVLKLQGACGSCPSSTMTLKMGIETRL
Sbjct: 101 VVVLKLQGACGSCPSSTMTLKMGIETRL 128


>gb|AFK38166.1| unknown [Medicago truncatula]
          Length = 199

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/81 (83%), Positives = 73/81 (90%)
 Frame = -2

Query: 245 LTRPRTQQTAGIVLLPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQ 66
           ++R   +  AG V+ P CVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVV+LKLQ
Sbjct: 70  ISRRAPRNKAGFVVSPRCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQ 129

Query: 65  GACGSCPSSTMTLKMGIETRL 3
           GACGSCPSSTMTLKMGIETRL
Sbjct: 130 GACGSCPSSTMTLKMGIETRL 150


Top