BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016510
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   201   2e-49
ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...   198   1e-48
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   197   2e-48
ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|1...   192   8e-47

>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  201 bits (512), Expect = 2e-49
 Identities = 103/128 (80%), Positives = 109/128 (85%)
 Frame = -3

Query: 643 MSWAGPEDFYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEI 464
           MSWAGPED YLSTSLASY                GILRSFDQFANAVLEGACERVIVG++
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 463 YCDIPLGLYIIRGENVVLIGELDLEKDELPLHMTRVSPAEIKRAQKAERESSDLKGTMRK 284
           YCDIPLGLY+IRGENVVLIGELDLEK+ELP HMTRVS AEIKRAQKAERE+SDLKGTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120

Query: 283 RMEFLDMD 260
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  198 bits (504), Expect = 1e-48
 Identities = 101/128 (78%), Positives = 109/128 (85%)
 Frame = -3

Query: 643 MSWAGPEDFYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEI 464
           MSWAGPED YLSTSLASY                GILRSFDQFANAVLEGACERVIVG++
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 463 YCDIPLGLYIIRGENVVLIGELDLEKDELPLHMTRVSPAEIKRAQKAERESSDLKGTMRK 284
           YCDIPLGLYIIRGENVVLIGELDLEK+ELP HMTRVS AEI+RAQKAER+++DLKGTMRK
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120

Query: 283 RMEFLDMD 260
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
          Length = 128

 Score =  197 bits (502), Expect = 2e-48
 Identities = 101/128 (78%), Positives = 107/128 (83%)
 Frame = -3

Query: 643 MSWAGPEDFYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEI 464
           MSWAGPED YLSTSLASY                G LRSFDQFANAVLEGACERVIVG++
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 463 YCDIPLGLYIIRGENVVLIGELDLEKDELPLHMTRVSPAEIKRAQKAERESSDLKGTMRK 284
           YCDIPLGLY+IRGENVVLIGELDLE++ELP HMTRVS AEIKRAQKAERE+SDLKGTMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120

Query: 283 RMEFLDMD 260
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_002304120.1| predicted protein [Populus trichocarpa] gi|222841552|gb|EEE79099.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  194 bits (493), Expect = 3e-47
 Identities = 99/128 (77%), Positives = 107/128 (83%)
 Frame = -3

Query: 643 MSWAGPEDFYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEI 464
           MSWAGPED YLSTSLASY                GILRSFDQFANAVLEGACER IVG++
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60

Query: 463 YCDIPLGLYIIRGENVVLIGELDLEKDELPLHMTRVSPAEIKRAQKAERESSDLKGTMRK 284
           YCDI LGLY+IRGENVVLIGELDLE++ELP HMTRVS AEIKRAQKAERE++DLKGTMRK
Sbjct: 61  YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRK 120

Query: 283 RMEFLDMD 260
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|118489961|gb|ABK96777.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222873302|gb|EEF10433.1| predicted protein [Populus
           trichocarpa]
          Length = 128

 Score =  192 bits (489), Expect = 8e-47
 Identities = 97/128 (75%), Positives = 108/128 (84%)
 Frame = -3

Query: 643 MSWAGPEDFYLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANAVLEGACERVIVGEI 464
           MSWAGPED YLSTSLA+Y                G+LRSFDQFANAVLEGACERVIVG++
Sbjct: 1   MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60

Query: 463 YCDIPLGLYIIRGENVVLIGELDLEKDELPLHMTRVSPAEIKRAQKAERESSDLKGTMRK 284
           YCDI LGLY+IRGENVVLIGELDLE++ELP HMTRVS AEI+RAQKAERE++DLKGTMRK
Sbjct: 61  YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120

Query: 283 RMEFLDMD 260
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128