BLASTX nr result

ID: Cnidium21_contig00016473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016473
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274237.1| PREDICTED: uncharacterized protein LOC100246...    63   5e-08
emb|CAN62587.1| hypothetical protein VITISV_028558 [Vitis vinifera]    63   5e-08
ref|NP_197889.1| uncharacterized protein [Arabidopsis thaliana] ...    58   1e-06

>ref|XP_002274237.1| PREDICTED: uncharacterized protein LOC100246165 [Vitis vinifera]
          Length = 753

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
 Frame = -1

Query: 477 MNSDEMDSLFEGMVLFDXXXXXXXXXXXXXXXXXXXXXNHQNLQSEPPSSPAADVSQPLD 298
           + +DEMDSLFEGM+LF+                           ++  +S ++  SQPLD
Sbjct: 3   LEADEMDSLFEGMILFNPSQTLADQDGVDGNCDPIPL-------TDASASLSSSSSQPLD 55

Query: 297 ENLFSDLTLVTP-QIQQTLAXXXXXXXXXXXXXXXXTRQSSGTRKKKRAAGLRIGYKKDE 121
           ENLFSDLTL+TP Q +  L                    S    +KK+ A LRIGY +D 
Sbjct: 56  ENLFSDLTLITPNQFRNPLLDPSPTPISTSTTREETPSVSRQISRKKKRASLRIGYGRDS 115

Query: 120 LDSIA 106
           L+ ++
Sbjct: 116 LNQLS 120


>emb|CAN62587.1| hypothetical protein VITISV_028558 [Vitis vinifera]
          Length = 717

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
 Frame = -1

Query: 477 MNSDEMDSLFEGMVLFDXXXXXXXXXXXXXXXXXXXXXNHQNLQSEPPSSPAADVSQPLD 298
           + +DEMDSLFEGM+LF+                           ++  +S ++  SQPLD
Sbjct: 3   LEADEMDSLFEGMILFNPSQTLADQDGVDGNCDPIPL-------TDASASLSSSSSQPLD 55

Query: 297 ENLFSDLTLVTP-QIQQTLAXXXXXXXXXXXXXXXXTRQSSGTRKKKRAAGLRIGYKKDE 121
           ENLFSDLTL+TP Q +  L                    S    +KK+ A LRIGY +D 
Sbjct: 56  ENLFSDLTLITPNQFRNPLLDPSPTPISTSTTREETPSVSRQISRKKKRASLRIGYGRDS 115

Query: 120 LDSIA 106
           L+ ++
Sbjct: 116 LNQLS 120


>ref|NP_197889.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20466600|gb|AAM20617.1| putative protein [Arabidopsis
           thaliana] gi|22136436|gb|AAM91296.1| putative protein
           [Arabidopsis thaliana] gi|332006013|gb|AED93396.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 736

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
 Frame = -1

Query: 468 DEMDSLFEGMVLFDXXXXXXXXXXXXXXXXXXXXXNHQNLQSEPPSSP------------ 325
           D+MDSLFEGM LF                        +      PS P            
Sbjct: 5   DDMDSLFEGMELFTPASQFSGDSKVSSPPQSEETKAAEATLITAPSQPDVTEATLITATS 64

Query: 324 AADVSQPLDENLFSDLTLVTPQIQQTLAXXXXXXXXXXXXXXXXTRQSSGTRKKKRAAGL 145
             D+++ LDENLFSDLT+VTP +Q                     RQ S  R+KKRAAGL
Sbjct: 65  QPDITEALDENLFSDLTIVTP-VQHQPEPMEAVITTHQSPAKNYGRQVS--RRKKRAAGL 121

Query: 144 RIGYKKDELDSI 109
           RIGY + E +++
Sbjct: 122 RIGYGRHETNNL 133


Top