BLASTX nr result

ID: Cnidium21_contig00016426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016426
         (1634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249...   347   4e-93
ref|XP_002520601.1| RNA binding protein, putative [Ricinus commu...   344   4e-92
ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cuc...   342   2e-91
ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|2...   338   3e-90
ref|NP_001241952.1| uncharacterized protein LOC100780819 [Glycin...   327   6e-87

>ref|XP_002273586.1| PREDICTED: uncharacterized protein LOC100249627 [Vitis vinifera]
            gi|297738257|emb|CBI27458.3| unnamed protein product
            [Vitis vinifera]
          Length = 414

 Score =  347 bits (891), Expect = 4e-93
 Identities = 192/362 (53%), Positives = 206/362 (56%), Gaps = 7/362 (1%)
 Frame = +2

Query: 56   MASYSNKGAPSNGSVYVCNLPPGTDDKMLDAHFGTIGVIKRDKRTGRPKIWLYRDKVTNE 235
            MA+YS  GAPSNGSVYVCNLP GTD+ ML  +FGTIG+IK+DKRTGRPKIWLYRDKVTNE
Sbjct: 1    MANYSGTGAPSNGSVYVCNLPHGTDETMLAEYFGTIGLIKKDKRTGRPKIWLYRDKVTNE 60

Query: 236  PKGDATVTYEDPYAASAAVEWFNNKDFHGATIEVCMAESK-KDDNSYSAAVPAEEVSLGG 412
            PKGDATVTYEDP+AA AAVEWFNNKDFHG+ I V +AESK KDD+SY++     +V   G
Sbjct: 61   PKGDATVTYEDPHAALAAVEWFNNKDFHGSIIGVFIAESKNKDDHSYNSGNQVNDVGDPG 120

Query: 413  ---DFGGQEESATDRNXXXXXXXXXXDVPAAKAWQQDGDWTCPNTRSVM*HXXXXXXXXX 583
               D  G EE   D N          D  A KAWQQDGDW CPNT               
Sbjct: 121  AASDLRGLEEDPLDMNGSAGRGRGRGDA-AGKAWQQDGDWLCPNT--------------- 164

Query: 584  XXXXXXXXXXXXXXXXXXXXXXXXXFRGVCNRC--XXXXXXXXXXXXXXXXXXXXXXXXX 757
                                     FRGVCNRC                           
Sbjct: 165  -----------------SCSNVNFAFRGVCNRCGSARPSGVSGSGAGAGGRGRGRGGPDS 207

Query: 758  XXXXXXVAAPTGLFGPNDWPCPMCANINWAKRNKCNVCNTNKPGTNEXXXXXXXXXXYK- 934
                  V APTGLFGPNDWPCPMC NINWAKR KCN+CNTNKPG NE          YK 
Sbjct: 208  AGHGRSVGAPTGLFGPNDWPCPMCGNINWAKRTKCNICNTNKPGHNEGGVRGGRGGGYKE 267

Query: 935  XXXXXXXXXXXXXXXXXXXXXXMYDEFGNLKKKFRAKLQQAETGQVLPGTGRAGWEVEEL 1114
                                  +YDEFGNLKKKFRAK QQAE GQVLPG GRAGWEVEEL
Sbjct: 268  LDEEELEETKRRRREAEEDDGELYDEFGNLKKKFRAKTQQAEAGQVLPGAGRAGWEVEEL 327

Query: 1115 GM 1120
            GM
Sbjct: 328  GM 329


>ref|XP_002520601.1| RNA binding protein, putative [Ricinus communis]
            gi|223540200|gb|EEF41774.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 483

 Score =  344 bits (882), Expect = 4e-92
 Identities = 186/358 (51%), Positives = 208/358 (58%), Gaps = 3/358 (0%)
 Frame = +2

Query: 56   MASYSNKGAPSNGSVYVCNLPPGTDDKMLDAHFGTIGVIKRDKRTGRPKIWLYRDKVTNE 235
            MASYS KGA +NGSVYVCNLP GTD+ ML  +FGTIG++K+DKRTGRPKIWLYRDK+TNE
Sbjct: 2    MASYSGKGASANGSVYVCNLPQGTDEDMLAEYFGTIGLLKKDKRTGRPKIWLYRDKLTNE 61

Query: 236  PKGDATVTYEDPYAASAAVEWFNNKDFHGATIEVCMAESK-KDDNSYSAAVPAEEVSLGG 412
            PKGDATVTYEDP+AA AA+EWFNNKDFHG  I V MAESK KD+++Y++ V    V   G
Sbjct: 62   PKGDATVTYEDPHAAQAAIEWFNNKDFHGNLIGVFMAESKNKDEHAYNSEVDPNAV---G 118

Query: 413  DFGGQEESATDRNXXXXXXXXXXDVPAAKAWQQDGDWTCPNTRSVM*HXXXXXXXXXXXX 592
            DFGG EE+A D N          D  + KAWQQ+GDW CPNT                  
Sbjct: 119  DFGGLEETAGDMNDDGGRGRGKGDA-SGKAWQQEGDWLCPNT------------------ 159

Query: 593  XXXXXXXXXXXXXXXXXXXXXXFRGVCNRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 772
                                  FRGVCNRC                              
Sbjct: 160  --------------SCSNVNFAFRGVCNRCGSARPSGASGGSAGAGRGRGRGGQNSGGLG 205

Query: 773  XVA-APTGLFGPNDWPCPMCANINWAKRNKCNVCNTNKPGTNEXXXXXXXXXXYK-XXXX 946
              A   TGLFGPNDWPCPMC NINWAKR KCN+CNTNKPG NE          YK     
Sbjct: 206  RAATGSTGLFGPNDWPCPMCGNINWAKRTKCNICNTNKPGHNEGGVRGGRGGGYKELDEE 265

Query: 947  XXXXXXXXXXXXXXXXXXMYDEFGNLKKKFRAKLQQAETGQVLPGTGRAGWEVEELGM 1120
                              +YDEFGNLKKKFRAK QQAE+G+VLPG GRAGWEVEELG+
Sbjct: 266  EIEETRRRRKEAEEDDGELYDEFGNLKKKFRAKTQQAESGRVLPGAGRAGWEVEELGV 323


>ref|XP_004159619.1| PREDICTED: uncharacterized LOC101219150 [Cucumis sativus]
          Length = 396

 Score =  342 bits (876), Expect = 2e-91
 Identities = 186/361 (51%), Positives = 205/361 (56%), Gaps = 6/361 (1%)
 Frame = +2

Query: 56   MASYSNKGAPSNGSVYVCNLPPGTDDKMLDAHFGTIGVIKRDKRTGRPKIWLYRDKVTNE 235
            MASY  KGAPSNGS+Y+CNLP GTD+ ML  +FGTIGV+K+DKRTGRPKIWLYRDK TNE
Sbjct: 1    MASYVGKGAPSNGSIYICNLPYGTDENMLAEYFGTIGVLKKDKRTGRPKIWLYRDKSTNE 60

Query: 236  PKGDATVTYEDPYAASAAVEWFNNKDFHGATIEVCMAESK-KDDNSYSAAVPAEEVSLGG 412
            PKGDATVTYEDP+AA AAVEWFNNKDFHG+ IEV +AESK KDD S++  V  + +   G
Sbjct: 61   PKGDATVTYEDPHAALAAVEWFNNKDFHGSIIEVHIAESKSKDDLSFNVVV--DPIVAAG 118

Query: 413  DFGGQEESATDRNXXXXXXXXXXDVPAAKAWQQDGDWTCPNTRSVM*HXXXXXXXXXXXX 592
            D  G EE+A   N          D P  KAWQQ+GDW CPNT                  
Sbjct: 119  DDIGSEETAVGMNGGGGRGRGRGDAP-GKAWQQEGDWLCPNT------------------ 159

Query: 593  XXXXXXXXXXXXXXXXXXXXXXFRGVCNRC----XXXXXXXXXXXXXXXXXXXXXXXXXX 760
                                  FRGVCNRC                              
Sbjct: 160  --------------SCSNVNFAFRGVCNRCGSARPSGAAGSGAGSIGRGRGRGTSNQDSG 205

Query: 761  XXXXXVAAPTGLFGPNDWPCPMCANINWAKRNKCNVCNTNKPGTNEXXXXXXXXXXYK-X 937
                 V APTGLFGPNDWPCPMC NINWAKR KCN+CNTNKPG NE          YK  
Sbjct: 206  GNSRQVGAPTGLFGPNDWPCPMCGNINWAKRTKCNICNTNKPGHNEGGVRGGRGGGYKEL 265

Query: 938  XXXXXXXXXXXXXXXXXXXXXMYDEFGNLKKKFRAKLQQAETGQVLPGTGRAGWEVEELG 1117
                                 MYDEFGNLKKKFRAK QQ E G++LPG GRAGWEVEELG
Sbjct: 266  DEEELEETKRRRREAEEDDGEMYDEFGNLKKKFRAKSQQMEAGRILPGAGRAGWEVEELG 325

Query: 1118 M 1120
            +
Sbjct: 326  V 326


>ref|XP_002311296.1| predicted protein [Populus trichocarpa] gi|222851116|gb|EEE88663.1|
            predicted protein [Populus trichocarpa]
          Length = 380

 Score =  338 bits (866), Expect = 3e-90
 Identities = 183/358 (51%), Positives = 204/358 (56%), Gaps = 3/358 (0%)
 Frame = +2

Query: 56   MASYSNKGAPSNGSVYVCNLPPGTDDKMLDAHFGTIGVIKRDKRTGRPKIWLYRDKVTNE 235
            MASY+ KG PSNG++Y+ NLP GTDD ML  +FGTIG++K+DKRTGRPKIWLYRDK+TNE
Sbjct: 1    MASYAGKGDPSNGTIYISNLPEGTDDIMLAGYFGTIGLLKKDKRTGRPKIWLYRDKMTNE 60

Query: 236  PKGDATVTYEDPYAASAAVEWFNNKDFHGATIEVCMAESK-KDDNSYSAAVPAEEVSLGG 412
            PKGDATVTYEDP+AA AAVEWFNNKDFHG  I V +A+SK KDD  Y++      V    
Sbjct: 61   PKGDATVTYEDPHAALAAVEWFNNKDFHGNIIGVFIAQSKSKDDTVYNS------VDDPN 114

Query: 413  DFGGQEESATDRNXXXXXXXXXXDVPAAKAWQQDGDWTCPNTRSVM*HXXXXXXXXXXXX 592
            DFGG EE+A D N          D  + KAWQQDGDW CPNT                  
Sbjct: 115  DFGGFEENAKDLNEGGGRGRGQDDA-SGKAWQQDGDWLCPNT------------------ 155

Query: 593  XXXXXXXXXXXXXXXXXXXXXXFRGVCNRC--XXXXXXXXXXXXXXXXXXXXXXXXXXXX 766
                                  FRGVCNRC                              
Sbjct: 156  --------------SCSNVNFAFRGVCNRCASARPSGPSGGGAGAGGHGRGRGANDIGVP 201

Query: 767  XXXVAAPTGLFGPNDWPCPMCANINWAKRNKCNVCNTNKPGTNEXXXXXXXXXXYKXXXX 946
               V APTGLFGPNDW CPMC NINWAKR+KCNVCNTNKPG NE          YK    
Sbjct: 202  GRSVGAPTGLFGPNDWTCPMCGNINWAKRSKCNVCNTNKPGHNEGGVRGGRGGGYKELDE 261

Query: 947  XXXXXXXXXXXXXXXXXXMYDEFGNLKKKFRAKLQQAETGQVLPGTGRAGWEVEELGM 1120
                              +YDEFGNLKKKFRAK QQAE G+VLPG GRAGWEVEE+G+
Sbjct: 262  EELEETKRRRKEAEDDGELYDEFGNLKKKFRAKTQQAEAGKVLPGAGRAGWEVEEIGV 319


>ref|NP_001241952.1| uncharacterized protein LOC100780819 [Glycine max]
            gi|255646988|gb|ACU23963.1| unknown [Glycine max]
          Length = 365

 Score =  327 bits (838), Expect = 6e-87
 Identities = 181/356 (50%), Positives = 198/356 (55%), Gaps = 1/356 (0%)
 Frame = +2

Query: 56   MASYSNKGAPSNGSVYVCNLPPGTDDKMLDAHFGTIGVIKRDKRTGRPKIWLYRDKVTNE 235
            MAS+    APSNGS YVCNLP GTDD ML  +FGTIG+IK+DKRTGRPKIWLYRDK TNE
Sbjct: 1    MASHPGNHAPSNGSAYVCNLPYGTDDNMLAEYFGTIGLIKKDKRTGRPKIWLYRDKETNE 60

Query: 236  PKGDATVTYEDPYAASAAVEWFNNKDFHGATIEVCMAESK-KDDNSYSAAVPAEEVSLGG 412
            PKGDATVTYEDP+AA AAVEWFNNKDFHG TI V +AESK KDD +Y+AAV   E  +  
Sbjct: 61   PKGDATVTYEDPHAAVAAVEWFNNKDFHGNTIGVFIAESKNKDDQAYNAAV---EPGVTD 117

Query: 413  DFGGQEESATDRNXXXXXXXXXXDVPAAKAWQQDGDWTCPNTRSVM*HXXXXXXXXXXXX 592
            + GG EE+  D N          D  + KAWQQDGDW C NT                  
Sbjct: 118  NVGGLEETTKDVNGGSGRGRGQNDT-SGKAWQQDGDWLCLNT------------------ 158

Query: 593  XXXXXXXXXXXXXXXXXXXXXXFRGVCNRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 772
                                  FRG CNRC                              
Sbjct: 159  --------------SCSNVNFAFRGACNRCGTARPAGASGISGAGGRGKGRAAQESGGIG 204

Query: 773  XVAAPTGLFGPNDWPCPMCANINWAKRNKCNVCNTNKPGTNEXXXXXXXXXXYKXXXXXX 952
              A   GLFGPNDWPCPMC NINWAKR KCN+CNTNKPG NE          YK      
Sbjct: 205  RPAG-GGLFGPNDWPCPMCGNINWAKRTKCNICNTNKPGHNEGGVRGGRGGGYKELDEEE 263

Query: 953  XXXXXXXXXXXXXXXXMYDEFGNLKKKFRAKLQQAETGQVLPGTGRAGWEVEELGM 1120
                            +YDEFGNLKKKFRAK QQAE  + LPG+GRAGWEVEELG+
Sbjct: 264  IEETRRRRREAEDDGELYDEFGNLKKKFRAKTQQAEAARGLPGSGRAGWEVEELGI 319


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