BLASTX nr result

ID: Cnidium21_contig00016394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016394
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513597.1| Ethylene-responsive transcription factor, pu...    87   2e-15
ref|XP_002331847.1| AP2/ERF domain-containing transcription fact...    84   1e-14
gb|ADE41106.1| AP2 domain class transcription factor [Malus x do...    80   2e-13
ref|XP_002317743.1| AP2/ERF domain-containing transcription fact...    76   2e-12
ref|XP_004149454.1| PREDICTED: ethylene-responsive transcription...    72   6e-11

>ref|XP_002513597.1| Ethylene-responsive transcription factor, putative [Ricinus
           communis] gi|223547505|gb|EEF49000.1|
           Ethylene-responsive transcription factor, putative
           [Ricinus communis]
          Length = 309

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/83 (55%), Positives = 55/83 (66%), Gaps = 11/83 (13%)
 Frame = -2

Query: 252 NMLCPIKFTEHRNITKKLTNPQLKKSKKFSDKR-----------IVRISVTDPDATXXXX 106
           ++LCP+KFTEH+ ITKK T P LK  K  SD+R           +VRISVTDPDAT    
Sbjct: 5   SILCPMKFTEHKRITKKYTKPSLKPKKPSSDERSSCRLEHIPPRVVRISVTDPDATDSSS 64

Query: 105 XXXXELFGRQRIKRYINEINIEA 37
               ELF RQR+KRY+NEI+IEA
Sbjct: 65  DEEDELFSRQRVKRYVNEISIEA 87


>ref|XP_002331847.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222875085|gb|EEF12216.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 363

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 12/87 (13%)
 Frame = -2

Query: 252 NMLCPIKFTEHRNITKKLTNPQLKKSKKFSDKR------------IVRISVTDPDATXXX 109
           ++LCPIK+TEH+ +TK+ T P LK  K  SD R            +VR++VTD DAT   
Sbjct: 5   SILCPIKYTEHKKVTKQFTKPSLKPKKLPSDDRCRLLEPSNPQPRLVRVTVTDHDATDSS 64

Query: 108 XXXXXELFGRQRIKRYINEINIEAGCK 28
                 LFGRQR+KRY+NEI+I+A CK
Sbjct: 65  SDEEGGLFGRQRVKRYVNEIDIQASCK 91


>gb|ADE41106.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 353

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
 Frame = -2

Query: 252 NMLCPIKFTEHRNITKKLTNPQLKKSKKFSDK---RIVRISVTDPDATXXXXXXXXELFG 82
           ++LCPIK++EHR+ TKKL  P+ K + + +     RIVRISVTDPDAT        E FG
Sbjct: 4   SILCPIKYSEHRSTTKKLMKPRKKATSESASTVTPRIVRISVTDPDATDSSSDEEEEFFG 63

Query: 81  RQRIKRYINEINIE 40
           RQR+K Y+NEINIE
Sbjct: 64  RQRVKHYVNEINIE 77


>ref|XP_002317743.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222858416|gb|EEE95963.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 365

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 14/96 (14%)
 Frame = -2

Query: 252 NMLCPIKFTEHRNITKKLTNPQLKKSKKFSDKR------------IVRISVTDPDATXXX 109
           ++LCPIK+TEH+ +TKK T   LK +   SD R            +VR++VTD DAT   
Sbjct: 5   SILCPIKYTEHKKVTKKFTKQPLKPNMVHSDDRCRSPEPSNPAPRLVRVTVTDHDATDSS 64

Query: 108 XXXXXELFGRQRIKRYINEINIE--AGCKIDVISAT 7
                ELFGRQR+KRY++EINI+  A CK   + AT
Sbjct: 65  SDEEGELFGRQRVKRYVSEINIQPAAFCKETNVIAT 100


>ref|XP_004149454.1| PREDICTED: ethylene-responsive transcription factor CRF4-like
           [Cucumis sativus]
          Length = 326

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/78 (47%), Positives = 50/78 (64%)
 Frame = -2

Query: 249 MLCPIKFTEHRNITKKLTNPQLKKSKKFSDKRIVRISVTDPDATXXXXXXXXELFGRQRI 70
           +  P+KFTEHRN T K +     K    S+ R+VRISVTDPDAT          F RQR+
Sbjct: 5   LFSPVKFTEHRNFTNKFS----AKKHHQSESRVVRISVTDPDATDSSSDEDD-FFERQRV 59

Query: 69  KRYINEINIEAGCKIDVI 16
           K+YINEI I++GC+ +++
Sbjct: 60  KKYINEIKIQSGCRNNLL 77


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