BLASTX nr result

ID: Cnidium21_contig00016387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016387
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_182273.1| fumarate hydratase, class II [Arabidopsis thali...   200   1e-49
ref|XP_002283168.2| PREDICTED: fumarate hydratase 2, chloroplast...   200   1e-49
ref|XP_002273033.1| PREDICTED: fumarate hydratase 1, mitochondri...   199   3e-49
ref|NP_001146296.1| uncharacterized protein LOC100279871 [Zea ma...   199   3e-49
ref|XP_003557953.1| PREDICTED: fumarate hydratase 2, chloroplast...   198   4e-49

>ref|NP_182273.1| fumarate hydratase, class II [Arabidopsis thaliana]
           gi|145331433|ref|NP_001078075.1| fumarate hydratase,
           class II [Arabidopsis thaliana]
           gi|39931311|sp|P93033.2|FUM1_ARATH RecName:
           Full=Fumarate hydratase 1, mitochondrial; Short=Fumarase
           1; Flags: Precursor gi|2443751|gb|AAB71399.1| fumarase
           [Arabidopsis thaliana] gi|2529676|gb|AAC62859.1|
           putative fumarase [Arabidopsis thaliana]
           gi|15809968|gb|AAL06911.1| At2g47510/T30B22.19
           [Arabidopsis thaliana] gi|17064768|gb|AAL32538.1|
           putative fumarase [Arabidopsis thaliana]
           gi|28059023|gb|AAO29979.1| putative fumarase
           [Arabidopsis thaliana] gi|330255758|gb|AEC10852.1|
           fumarate hydratase, class II [Arabidopsis thaliana]
           gi|330255759|gb|AEC10853.1| fumarate hydratase, class II
           [Arabidopsis thaliana]
          Length = 492

 Score =  200 bits (509), Expect = 1e-49
 Identities = 103/130 (79%), Positives = 108/130 (83%)
 Frame = -3

Query: 547 MVCAQVMGNHVGITVGGANGHFELNVYKPMIXXXXXXXXXXXXXXXXSFEKNCARGIEAN 368
           MVCAQVMGNHV +TVGG+NGHFELNV+KP+I                SFEKNC RGIEAN
Sbjct: 363 MVCAQVMGNHVAVTVGGSNGHFELNVFKPVIASALLHSVRLIADASASFEKNCVRGIEAN 422

Query: 367 RGRISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKEAALNLKVLTSEEFDELV 188
           R RISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEG TLKEAALNL VLT+EEFD LV
Sbjct: 423 RERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGCTLKEAALNLGVLTAEEFDTLV 482

Query: 187 VPEKMIGPSD 158
           VPEKMIGPSD
Sbjct: 483 VPEKMIGPSD 492


>ref|XP_002283168.2| PREDICTED: fumarate hydratase 2, chloroplastic-like [Vitis
           vinifera] gi|296089733|emb|CBI39552.3| unnamed protein
           product [Vitis vinifera]
          Length = 496

 Score =  200 bits (509), Expect = 1e-49
 Identities = 103/130 (79%), Positives = 109/130 (83%)
 Frame = -3

Query: 547 MVCAQVMGNHVGITVGGANGHFELNVYKPMIXXXXXXXXXXXXXXXXSFEKNCARGIEAN 368
           MVCAQVMGNHV ITVGG+NGHFELNVYKP+I                SFEKNC RGI+AN
Sbjct: 367 MVCAQVMGNHVAITVGGSNGHFELNVYKPLIASGLLRSLRLLGDASASFEKNCIRGIQAN 426

Query: 367 RGRISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKEAALNLKVLTSEEFDELV 188
           + RISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLK AALNL VLTSEEF++LV
Sbjct: 427 QERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKHAALNLGVLTSEEFEKLV 486

Query: 187 VPEKMIGPSD 158
           VPEKMIGPSD
Sbjct: 487 VPEKMIGPSD 496


>ref|XP_002273033.1| PREDICTED: fumarate hydratase 1, mitochondrial [Vitis vinifera]
           gi|297743928|emb|CBI36898.3| unnamed protein product
           [Vitis vinifera]
          Length = 494

 Score =  199 bits (505), Expect = 3e-49
 Identities = 102/130 (78%), Positives = 108/130 (83%)
 Frame = -3

Query: 547 MVCAQVMGNHVGITVGGANGHFELNVYKPMIXXXXXXXXXXXXXXXXSFEKNCARGIEAN 368
           MVCAQVMGNHV ITVGG+NGHFELNV+KP+I                SFEKNC RGI+AN
Sbjct: 365 MVCAQVMGNHVAITVGGSNGHFELNVFKPLIASGLLRSIRLLGDASASFEKNCVRGIQAN 424

Query: 367 RGRISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKEAALNLKVLTSEEFDELV 188
           + RI KLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEG TLKEAALNL VLTSEEFD+LV
Sbjct: 425 KERILKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGRTLKEAALNLGVLTSEEFDQLV 484

Query: 187 VPEKMIGPSD 158
           VPEKMIGPSD
Sbjct: 485 VPEKMIGPSD 494


>ref|NP_001146296.1| uncharacterized protein LOC100279871 [Zea mays]
           gi|223975927|gb|ACN32151.1| unknown [Zea mays]
           gi|414866713|tpg|DAA45270.1| TPA: hypothetical protein
           ZEAMMB73_835410 [Zea mays]
          Length = 498

 Score =  199 bits (505), Expect = 3e-49
 Identities = 101/130 (77%), Positives = 108/130 (83%)
 Frame = -3

Query: 547 MVCAQVMGNHVGITVGGANGHFELNVYKPMIXXXXXXXXXXXXXXXXSFEKNCARGIEAN 368
           MVCAQVMGNHVG+T+GGANGHFELNV+KPMI                SFEKNC RGI+AN
Sbjct: 369 MVCAQVMGNHVGVTIGGANGHFELNVFKPMIAAGLLRSLRLLGDASVSFEKNCVRGIQAN 428

Query: 367 RGRISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKEAALNLKVLTSEEFDELV 188
             RIS+LLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKEAAL+L VLT +EF ELV
Sbjct: 429 HKRISQLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKEAALDLGVLTEQEFHELV 488

Query: 187 VPEKMIGPSD 158
           VPEKMIGPSD
Sbjct: 489 VPEKMIGPSD 498


>ref|XP_003557953.1| PREDICTED: fumarate hydratase 2, chloroplastic-like [Brachypodium
           distachyon]
          Length = 494

 Score =  198 bits (504), Expect = 4e-49
 Identities = 101/130 (77%), Positives = 108/130 (83%)
 Frame = -3

Query: 547 MVCAQVMGNHVGITVGGANGHFELNVYKPMIXXXXXXXXXXXXXXXXSFEKNCARGIEAN 368
           MVCAQVMGNHVG+T+GG+NGHFELNV+KPMI                SFEKNC RGIEAN
Sbjct: 365 MVCAQVMGNHVGVTIGGSNGHFELNVFKPMIAAGLLRSLRLLGDASVSFEKNCVRGIEAN 424

Query: 367 RGRISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKEAALNLKVLTSEEFDELV 188
             RIS+LLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKEAAL+L VLT +EF ELV
Sbjct: 425 HKRISQLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKEAALSLGVLTEKEFHELV 484

Query: 187 VPEKMIGPSD 158
           VPEKMIGPSD
Sbjct: 485 VPEKMIGPSD 494


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