BLASTX nr result

ID: Cnidium21_contig00016383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016383
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18131.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002268055.1| PREDICTED: uncharacterized protein LOC100265...   108   6e-22
ref|XP_002534265.1| conserved hypothetical protein [Ricinus comm...    90   2e-16
ref|XP_002881577.1| DNA binding protein [Arabidopsis lyrata subs...    75   6e-12
ref|NP_181364.2| myb-like HTH transcriptional regulator-like pro...    71   8e-11

>emb|CBI18131.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/104 (58%), Positives = 74/104 (71%)
 Frame = +3

Query: 3   SHLQMFRSKKIDDPSQAIADNKNPENYGDRNIYNLSQLPMLQSYNQSYNLSTFRYGDALW 182
           SHLQM+RSKKI+DP Q +AD+++    GD NIYNLSQLPMLQ  NQ    S+FRYGDA W
Sbjct: 144 SHLQMYRSKKIEDPGQVLADHRHLVESGDPNIYNLSQLPMLQGLNQR-PTSSFRYGDASW 202

Query: 183 NAGHVKWMQNLYNMSGRNSVIDYKTRPRFYSSVTEKIPGRNSMN 314
           +A H  WM + +   GR+SV D  TRP FY SVTE+I G N+ N
Sbjct: 203 SA-HENWMHSPF--IGRSSV-DKTTRPGFYGSVTERIFGGNNNN 242


>ref|XP_002268055.1| PREDICTED: uncharacterized protein LOC100265991 [Vitis vinifera]
           gi|147820277|emb|CAN73581.1| hypothetical protein
           VITISV_002087 [Vitis vinifera]
          Length = 370

 Score =  108 bits (269), Expect = 6e-22
 Identities = 61/104 (58%), Positives = 74/104 (71%)
 Frame = +3

Query: 3   SHLQMFRSKKIDDPSQAIADNKNPENYGDRNIYNLSQLPMLQSYNQSYNLSTFRYGDALW 182
           SHLQM+RSKKI+DP Q +AD+++    GD NIYNLSQLPMLQ  NQ    S+FRYGDA W
Sbjct: 111 SHLQMYRSKKIEDPGQVLADHRHLVESGDPNIYNLSQLPMLQGLNQR-PTSSFRYGDASW 169

Query: 183 NAGHVKWMQNLYNMSGRNSVIDYKTRPRFYSSVTEKIPGRNSMN 314
           +A H  WM + +   GR+SV D  TRP FY SVTE+I G N+ N
Sbjct: 170 SA-HENWMHSPF--IGRSSV-DKTTRPGFYGSVTERIFGGNNNN 209


>ref|XP_002534265.1| conserved hypothetical protein [Ricinus communis]
           gi|223525618|gb|EEF28118.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 182

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/62 (69%), Positives = 52/62 (83%)
 Frame = +3

Query: 3   SHLQMFRSKKIDDPSQAIADNKNPENYGDRNIYNLSQLPMLQSYNQSYNLSTFRYGDALW 182
           SHLQM+RSKKIDDPSQ +AD+++    GDRNIYNLSQLPMLQ Y+Q +  S++RYGDA W
Sbjct: 110 SHLQMYRSKKIDDPSQVMADHRHLMKSGDRNIYNLSQLPMLQGYHQRH-ASSYRYGDASW 168

Query: 183 NA 188
           NA
Sbjct: 169 NA 170


>ref|XP_002881577.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327416|gb|EFH57836.1| DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 338

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 51/104 (49%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
 Frame = +3

Query: 3   SHLQMFRSKKIDDPSQAIADNKNP-ENYGDRNIYNLSQLPMLQSYNQSYNLSTFRYGDAL 179
           SHLQM+RSKKIDD  QAIAD+K+  E   DRNIY LSQLPM + YN++Y+ S FRYG   
Sbjct: 96  SHLQMYRSKKIDDQGQAIADHKHLFETSTDRNIYKLSQLPMFRGYNRNYD-SPFRYGSKF 154

Query: 180 WNAGHVKWMQNLYNMS--GRNSVIDYKTRPRFY--SSVTEKIPG 299
            NA       +L+N S  G +  +  + RP     SSV+  I G
Sbjct: 155 SNA-------SLWNSSSHGTDRSLIEQIRPGLIRSSSVSNNIRG 191


>ref|NP_181364.2| myb-like HTH transcriptional regulator-like protein [Arabidopsis
           thaliana] gi|26450454|dbj|BAC42341.1| unknown protein
           [Arabidopsis thaliana] gi|28827324|gb|AAO50506.1|
           unknown protein [Arabidopsis thaliana]
           gi|330254426|gb|AEC09520.1| myb-like HTH transcriptional
           regulator-like protein [Arabidopsis thaliana]
          Length = 340

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 48/102 (47%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
 Frame = +3

Query: 3   SHLQMFRSKKIDDPSQAIADNKNP-ENYGDRNIYNLSQLPMLQSYNQSYNLSTFRYGDAL 179
           SHLQM+RSKKIDD  QAIA +K+  E   DRNIY LSQLPM + YN +++ S FRYG  +
Sbjct: 101 SHLQMYRSKKIDDQGQAIAGHKHLFETSTDRNIYKLSQLPMFRGYNHNHD-SPFRYGSKI 159

Query: 180 WNAGHVKWMQNLYNMSGRNSVIDYKTRPRFY--SSVTEKIPG 299
            NA     + N  +     S+ID + RP     +SV+  I G
Sbjct: 160 SNAS----LWNSSSQGTERSLID-QIRPGLIRNASVSNNIRG 196


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