BLASTX nr result

ID: Cnidium21_contig00016356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016356
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61504.1| hypothetical protein VITISV_011736 [Vitis vinifera]   379   e-103
ref|XP_002270029.1| PREDICTED: ribosome biogenesis protein BRX1 ...   378   e-103
gb|AFK42527.1| unknown [Lotus japonicus]                              375   e-102
ref|XP_002529740.1| ribosome biogenesis protein brix, putative [...   374   e-101
ref|XP_003552625.1| PREDICTED: ribosome biogenesis protein BRX1-...   373   e-101

>emb|CAN61504.1| hypothetical protein VITISV_011736 [Vitis vinifera]
          Length = 316

 Score =  379 bits (972), Expect = e-103
 Identities = 181/232 (78%), Positives = 202/232 (87%), Gaps = 5/232 (2%)
 Frame = -1

Query: 682 PKYDNETHSG-PTFRNKEKVLVTCSRRINYRYRHLMLNLVSLLPHCKKENKVESK----A 518
           P    ET S  P FRNKEKVLVTCSRRI+YRYRHLML++VSLLPH KK+NKVESK    A
Sbjct: 38  PTETKETESSSPIFRNKEKVLVTCSRRISYRYRHLMLSIVSLLPHAKKDNKVESKESKGA 97

Query: 517 ALNELVELRSCSSCLFFESRKETDLYLWMVKCPTGPSVKFLVNAVHTMEELKLTGNHLNN 338
            LNELVEL++CSSCLFFE RK+ DLYLWM KCP+GPSVKF+V+AVHTMEELKLTGNHL  
Sbjct: 98  TLNELVELKNCSSCLFFECRKQKDLYLWMAKCPSGPSVKFMVDAVHTMEELKLTGNHLKG 157

Query: 337 SRPLLTFSTSFGKDAHWKLLKEMITQIFGTPKDHRRTKPYYDHVFAFSIVDDRIWFRNYQ 158
           SRPLLTFST+F KD HWKLLKEMITQIFGTPK+HR+ KPY+DHVFAFS+ DD IWFRNYQ
Sbjct: 158 SRPLLTFSTNFDKDPHWKLLKEMITQIFGTPKEHRKAKPYHDHVFAFSLADDHIWFRNYQ 217

Query: 157 ISCPCTEAEKIDQEGLMKMTLVEVGPRFCLNPIKIFGGSFGGQTLYENPFYV 2
           IS P  E++K+D+ GL K+TLVEVGPRFCLNPIKIFGGSFGG TLYENPFY+
Sbjct: 218 ISVPHNESDKVDRGGLDKITLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYI 269


>ref|XP_002270029.1| PREDICTED: ribosome biogenesis protein BRX1 homolog [Vitis
           vinifera] gi|297744237|emb|CBI37207.3| unnamed protein
           product [Vitis vinifera]
          Length = 316

 Score =  378 bits (970), Expect = e-103
 Identities = 178/223 (79%), Positives = 198/223 (88%), Gaps = 4/223 (1%)
 Frame = -1

Query: 658 SGPTFRNKEKVLVTCSRRINYRYRHLMLNLVSLLPHCKKENKVESK----AALNELVELR 491
           S P FRNKEKVLVTCSRRI+YRYRHLML++VSLLPH KK+NKVESK    A LNELVEL+
Sbjct: 47  SSPIFRNKEKVLVTCSRRISYRYRHLMLSIVSLLPHAKKDNKVESKESKGATLNELVELK 106

Query: 490 SCSSCLFFESRKETDLYLWMVKCPTGPSVKFLVNAVHTMEELKLTGNHLNNSRPLLTFST 311
           +CSSCLFFE RK+ DLYLWM KCP GPSVKF+V+AVHTMEELKLTGNHL  SRPLLTFST
Sbjct: 107 NCSSCLFFECRKQKDLYLWMAKCPNGPSVKFMVDAVHTMEELKLTGNHLKGSRPLLTFST 166

Query: 310 SFGKDAHWKLLKEMITQIFGTPKDHRRTKPYYDHVFAFSIVDDRIWFRNYQISCPCTEAE 131
           +F KD HWKLLKEMITQIFGTPK+HR+ KPY+DHVFAFS+ DD IWFRNYQIS P  E++
Sbjct: 167 NFDKDPHWKLLKEMITQIFGTPKEHRKAKPYHDHVFAFSLADDHIWFRNYQISVPHNESD 226

Query: 130 KIDQEGLMKMTLVEVGPRFCLNPIKIFGGSFGGQTLYENPFYV 2
           K+D+ GL K+TLVEVGPRFCLNPIKIFGGSFGG TLYENPFY+
Sbjct: 227 KVDRGGLDKITLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYI 269


>gb|AFK42527.1| unknown [Lotus japonicus]
          Length = 320

 Score =  375 bits (963), Expect = e-102
 Identities = 181/227 (79%), Positives = 197/227 (86%), Gaps = 4/227 (1%)
 Frame = -1

Query: 670 NETHSGPTFRNKEKVLVTCSRRINYRYRHLMLNLVSLLPHCKKENKVESK----AALNEL 503
           NE    P FRNKEKVLVTCSRRI YRYRHLMLN+VSLLPHCKK+NKVESK    A LNEL
Sbjct: 47  NENGHSPVFRNKEKVLVTCSRRIIYRYRHLMLNVVSLLPHCKKDNKVESKETKGATLNEL 106

Query: 502 VELRSCSSCLFFESRKETDLYLWMVKCPTGPSVKFLVNAVHTMEELKLTGNHLNNSRPLL 323
           VEL++CSSCLFFE RK  DL+LWM KCP GPSVKFLV+AVHTMEELKLTGNHL  SRPLL
Sbjct: 107 VELKNCSSCLFFECRKAKDLFLWMSKCPNGPSVKFLVSAVHTMEELKLTGNHLKASRPLL 166

Query: 322 TFSTSFGKDAHWKLLKEMITQIFGTPKDHRRTKPYYDHVFAFSIVDDRIWFRNYQISCPC 143
           TFST+F KDAHWKLLKEM+ QIF TPKDHR++KP++DHVF FSIVDD IWFRNYQIS P 
Sbjct: 167 TFSTNFEKDAHWKLLKEMLLQIFETPKDHRKSKPFHDHVFVFSIVDDHIWFRNYQISVPH 226

Query: 142 TEAEKIDQEGLMKMTLVEVGPRFCLNPIKIFGGSFGGQTLYENPFYV 2
            E++K+ + GL KMTLVEVGPRFCLNPIKIFGGSFGG TLYENPFYV
Sbjct: 227 NESDKLPRGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYV 273


>ref|XP_002529740.1| ribosome biogenesis protein brix, putative [Ricinus communis]
           gi|223530781|gb|EEF32647.1| ribosome biogenesis protein
           brix, putative [Ricinus communis]
          Length = 312

 Score =  374 bits (960), Expect = e-101
 Identities = 178/219 (81%), Positives = 194/219 (88%), Gaps = 4/219 (1%)
 Frame = -1

Query: 646 FRNKEKVLVTCSRRINYRYRHLMLNLVSLLPHCKKENKVESKA----ALNELVELRSCSS 479
           FRNKEKVLVTCSRRINYRYRHLMLN+VSLLPHCKK+NKVESK+    ALNELVEL+  SS
Sbjct: 47  FRNKEKVLVTCSRRINYRYRHLMLNIVSLLPHCKKDNKVESKSSKGMALNELVELKGSSS 106

Query: 478 CLFFESRKETDLYLWMVKCPTGPSVKFLVNAVHTMEELKLTGNHLNNSRPLLTFSTSFGK 299
           CLFFE RK  DLYLWM KCP GPSVKFLVNAVHTMEELKLTGNHL  SRP+LTFS +F K
Sbjct: 107 CLFFECRKHKDLYLWMAKCPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSANFDK 166

Query: 298 DAHWKLLKEMITQIFGTPKDHRRTKPYYDHVFAFSIVDDRIWFRNYQISCPCTEAEKIDQ 119
           DAHWKLLKEM+ QIFGTPK+HR++KPY+DHVF FSIVDD IWFRNYQIS P  E++K+ +
Sbjct: 167 DAHWKLLKEMLMQIFGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVVR 226

Query: 118 EGLMKMTLVEVGPRFCLNPIKIFGGSFGGQTLYENPFYV 2
            GL KMTLVEVGPRFCLNPIKIFGGSFGG TLYENPFY+
Sbjct: 227 GGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYI 265


>ref|XP_003552625.1| PREDICTED: ribosome biogenesis protein BRX1-like [Glycine max]
          Length = 316

 Score =  373 bits (958), Expect = e-101
 Identities = 178/228 (78%), Positives = 194/228 (85%), Gaps = 4/228 (1%)
 Frame = -1

Query: 673 DNETHSGPTFRNKEKVLVTCSRRINYRYRHLMLNLVSLLPHCKKENKVESK----AALNE 506
           DN     P FRNKEK+LVTCSRRINYRYRHLMLNLV+LLPHCKK+NKVESK    A LNE
Sbjct: 42  DNNNADSPIFRNKEKLLVTCSRRINYRYRHLMLNLVTLLPHCKKDNKVESKETKGATLNE 101

Query: 505 LVELRSCSSCLFFESRKETDLYLWMVKCPTGPSVKFLVNAVHTMEELKLTGNHLNNSRPL 326
           LVEL++CSSCLFFE RK  DLYLWM KCP GPSVKFLV+AVHTMEELKLTGNHL  SRP+
Sbjct: 102 LVELKNCSSCLFFECRKHKDLYLWMAKCPNGPSVKFLVSAVHTMEELKLTGNHLQGSRPI 161

Query: 325 LTFSTSFGKDAHWKLLKEMITQIFGTPKDHRRTKPYYDHVFAFSIVDDRIWFRNYQISCP 146
           LTFS +F KDAHWKLLKEM+ QIF TPKDHR+ KP++DHVF FSIVDD IWFRNYQIS  
Sbjct: 162 LTFSANFEKDAHWKLLKEMLLQIFETPKDHRKAKPFHDHVFVFSIVDDHIWFRNYQISVH 221

Query: 145 CTEAEKIDQEGLMKMTLVEVGPRFCLNPIKIFGGSFGGQTLYENPFYV 2
             EA+K+ + GL KMTL+EVGPRFCLNPIKIFGGSFGG TLYENP YV
Sbjct: 222 HNEADKLPRGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYV 269


Top