BLASTX nr result

ID: Cnidium21_contig00016294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016294
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycin...    67   2e-09
ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycin...    67   2e-09
ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitoch...    66   3e-09
ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitoch...    66   3e-09
ref|XP_002436394.1| hypothetical protein SORBIDRAFT_10g001740 [S...    65   7e-09

>ref|NP_001241009.1| uncharacterized protein LOC100812176 [Glycine max]
           gi|255640572|gb|ACU20571.1| unknown [Glycine max]
          Length = 143

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/34 (88%), Positives = 34/34 (100%)
 Frame = -2

Query: 297 RKSMCRIKHVLTERAIEDPDPRRSSEMKRLVNAL 196
           RKSMCRIKHVLTERAIE+PDPRRS+EMKR++NAL
Sbjct: 110 RKSMCRIKHVLTERAIEEPDPRRSAEMKRMINAL 143


>ref|NP_001238505.1| uncharacterized protein LOC100500208 [Glycine max]
           gi|255629706|gb|ACU15202.1| unknown [Glycine max]
          Length = 142

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/34 (88%), Positives = 34/34 (100%)
 Frame = -2

Query: 297 RKSMCRIKHVLTERAIEDPDPRRSSEMKRLVNAL 196
           RKSMCRIKHVLTERAIE+PDPRRS+EMKR++NAL
Sbjct: 109 RKSMCRIKHVLTERAIEEPDPRRSAEMKRMINAL 142


>ref|XP_004138121.1| PREDICTED: 39S ribosomal protein L47, mitochondrial-like [Cucumis
           sativus] gi|449528917|ref|XP_004171448.1| PREDICTED: 39S
           ribosomal protein L47, mitochondrial-like [Cucumis
           sativus]
          Length = 143

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/34 (85%), Positives = 34/34 (100%)
 Frame = -2

Query: 297 RKSMCRIKHVLTERAIEDPDPRRSSEMKRLVNAL 196
           RKSMCRIKHVLTERAI++PDPRRS+EMKR++NAL
Sbjct: 110 RKSMCRIKHVLTERAIDEPDPRRSAEMKRMINAL 143


>ref|XP_002283452.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform 1
           [Vitis vinifera] gi|225457112|ref|XP_002283459.1|
           PREDICTED: 39S ribosomal protein L47, mitochondrial
           isoform 2 [Vitis vinifera] gi|297733826|emb|CBI15073.3|
           unnamed protein product [Vitis vinifera]
          Length = 140

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -2

Query: 297 RKSMCRIKHVLTERAIEDPDPRRSSEMKRLVNAL 196
           RKSMCRIKHVLTERAIE+PDPRRS EMKR++NAL
Sbjct: 107 RKSMCRIKHVLTERAIEEPDPRRSVEMKRMINAL 140


>ref|XP_002436394.1| hypothetical protein SORBIDRAFT_10g001740 [Sorghum bicolor]
           gi|241914617|gb|EER87761.1| hypothetical protein
           SORBIDRAFT_10g001740 [Sorghum bicolor]
          Length = 146

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -2

Query: 297 RKSMCRIKHVLTERAIEDPDPRRSSEMKRLVNAL 196
           +KSMCRIKHVLTERAI +PDPRRSSEMKR++NAL
Sbjct: 113 KKSMCRIKHVLTERAIAEPDPRRSSEMKRMINAL 146


Top