BLASTX nr result

ID: Cnidium21_contig00016271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016271
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246...   379   e-103
ref|XP_004151849.1| PREDICTED: uncharacterized protein LOC101206...   358   2e-96
ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232...   357   4e-96
ref|NP_568522.1| RNA recognition motif (RRM)-containing protein ...   356   6e-96
ref|XP_003624657.1| Protein vip1 [Medicago truncatula] gi|355499...   355   1e-95

>ref|XP_002265170.2| PREDICTED: uncharacterized protein LOC100246079 [Vitis vinifera]
            gi|296089289|emb|CBI39061.3| unnamed protein product
            [Vitis vinifera]
          Length = 268

 Score =  379 bits (974), Expect = e-103
 Identities = 199/264 (75%), Positives = 229/264 (86%), Gaps = 1/264 (0%)
 Frame = -1

Query: 1042 TRTVQVGHVSDLATEREIHEFFSFSGEIEHIEIPNDS-RPKIAFVTFKDPQALEIALLLS 866
            TRTVQVGHVSDLA EREIHEFFSFSG+IEH+EI  DS + + AFVTFKDP+ALEIALLLS
Sbjct: 3    TRTVQVGHVSDLAGEREIHEFFSFSGDIEHVEILRDSGQLRTAFVTFKDPKALEIALLLS 62

Query: 865  GATIVDQIVSITPAENYVPQSVVQGESMTDNNMSMGGEDASPHAEAQTTSPSSGRVYVSK 686
            GATIVDQ+V+ITP ENYVP +  +     D    +   D SP+AE + TSP++GRVYV+K
Sbjct: 63   GATIVDQVVTITPVENYVPTAEREVSITDDAVCQVPDGDVSPNAEGKATSPNNGRVYVNK 122

Query: 685  AQDVVSAMLAKGSALRQDAMNKARAFDEKHQLRANASARVNSFDKRVGLTEKFSVGISVV 506
            AQDVV++MLAKGSA+ QDAMNKA+AFDEKHQL A+ASA+V SFD+RVGLTEK +VGISVV
Sbjct: 123  AQDVVTSMLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVISFDRRVGLTEKLTVGISVV 182

Query: 505  NEKVKSVDQMLQVSDKTMAALMAAERKLNNTGSAVKSSRYVTAGTTWLNGAFGKVAKAGQ 326
            NEKVKSVDQ L VSDKTMAAL+AAERKLNNTGSAVK+SRYVTAGTTWLNGAF KVAKAGQ
Sbjct: 183  NEKVKSVDQRLHVSDKTMAALLAAERKLNNTGSAVKTSRYVTAGTTWLNGAFTKVAKAGQ 242

Query: 325  VAGTKTKAKWSMALSNLTAKDPPI 254
            +AGTKT+ K+ +A+SNLTAKDP I
Sbjct: 243  IAGTKTREKFHLAVSNLTAKDPSI 266


>ref|XP_004151849.1| PREDICTED: uncharacterized protein LOC101206093 [Cucumis sativus]
          Length = 271

 Score =  358 bits (918), Expect = 2e-96
 Identities = 189/267 (70%), Positives = 222/267 (83%), Gaps = 2/267 (0%)
 Frame = -1

Query: 1042 TRTVQVGHVSDLATEREIHEFFSFSGEIEHIEIP-NDSRPKIAFVTFKDPQALEIALLLS 866
            TRTVQV HVSDLATEREIHEFFSFSGEIEHIEI       K AFVTF DP+ALEIALLLS
Sbjct: 5    TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLS 64

Query: 865  GATIVDQIVSITPAENYVPQSVVQGESMTDNNMSMGG-EDASPHAEAQTTSPSSGRVYVS 689
            GATIVD+IVSITPAEN+VP+  +Q   + DN   +   E+ SP  E   + PSSG++YV+
Sbjct: 65   GATIVDKIVSITPAENHVPRREMQEVRVADNAACLTPTENNSPSIEDSASQPSSGKMYVN 124

Query: 688  KAQDVVSAMLAKGSALRQDAMNKARAFDEKHQLRANASARVNSFDKRVGLTEKFSVGISV 509
            +AQ+VV+ +LAKGSA+ QDAMNKA+AFDEKHQL A+ASA+V SFD+RVGLTEK +VGISV
Sbjct: 125  RAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISV 184

Query: 508  VNEKVKSVDQMLQVSDKTMAALMAAERKLNNTGSAVKSSRYVTAGTTWLNGAFGKVAKAG 329
            VNEKVKSVDQ L VSDKTMAA+ AAERKLN+TGSAVK+S+YVTA   WLNGAFGKVAKAG
Sbjct: 185  VNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAG 244

Query: 328  QVAGTKTKAKWSMALSNLTAKDPPIAA 248
            Q AGTKT+ K+ +A+SNL +K+PP+ A
Sbjct: 245  QAAGTKTREKFHLAMSNLISKEPPVVA 271


>ref|XP_004156755.1| PREDICTED: uncharacterized protein LOC101232015 [Cucumis sativus]
          Length = 271

 Score =  357 bits (916), Expect = 4e-96
 Identities = 189/267 (70%), Positives = 222/267 (83%), Gaps = 2/267 (0%)
 Frame = -1

Query: 1042 TRTVQVGHVSDLATEREIHEFFSFSGEIEHIEIP-NDSRPKIAFVTFKDPQALEIALLLS 866
            TRTVQV HVSDLATEREIHEFFSFSGEIEHIEI       K AFVTF DP+ALEIALLLS
Sbjct: 5    TRTVQVKHVSDLATEREIHEFFSFSGEIEHIEIQCEQGESKTAFVTFTDPKALEIALLLS 64

Query: 865  GATIVDQIVSITPAENYVPQSVVQGESMTDNNMSMGG-EDASPHAEAQTTSPSSGRVYVS 689
            GATIVD+IVSITPAEN+VP+  +Q   + DN   +   E+ SP  E   + PSSG++YV+
Sbjct: 65   GATIVDKIVSITPAENHVPRREMQEVRVGDNAACLTPTENNSPSIEDSASQPSSGKMYVN 124

Query: 688  KAQDVVSAMLAKGSALRQDAMNKARAFDEKHQLRANASARVNSFDKRVGLTEKFSVGISV 509
            +AQ+VV+ +LAKGSA+ QDAMNKA+AFDEKHQL A+ASA+V SFD+RVGLTEK +VGISV
Sbjct: 125  RAQEVVATVLAKGSAIGQDAMNKAKAFDEKHQLTASASAKVLSFDRRVGLTEKLTVGISV 184

Query: 508  VNEKVKSVDQMLQVSDKTMAALMAAERKLNNTGSAVKSSRYVTAGTTWLNGAFGKVAKAG 329
            VNEKVKSVDQ L VSDKTMAA+ AAERKLN+TGSAVK+S+YVTA   WLNGAFGKVAKAG
Sbjct: 185  VNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKVAKAG 244

Query: 328  QVAGTKTKAKWSMALSNLTAKDPPIAA 248
            Q AGTKT+ K+ +A+SNL +K+PP+ A
Sbjct: 245  QAAGTKTREKFHLAMSNLISKEPPVVA 271


>ref|NP_568522.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana]
            gi|21593919|gb|AAM65884.1| unknown [Arabidopsis thaliana]
            gi|26450493|dbj|BAC42360.1| unknown protein [Arabidopsis
            thaliana] gi|28973403|gb|AAO64026.1| putative
            RRM-containing protein [Arabidopsis thaliana]
            gi|332006499|gb|AED93882.1| RNA recognition motif
            (RRM)-containing protein [Arabidopsis thaliana]
          Length = 267

 Score =  356 bits (914), Expect = 6e-96
 Identities = 189/268 (70%), Positives = 224/268 (83%), Gaps = 1/268 (0%)
 Frame = -1

Query: 1051 MVVTRTVQVGHVSDLATEREIHEFFSFSGEIEHIEIPND-SRPKIAFVTFKDPQALEIAL 875
            M  TR+VQV +VSDLATEREIHEFFSFSG+IEHIEI  +  + +IAFVTF DP+ALEIAL
Sbjct: 1    MQTTRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIAL 60

Query: 874  LLSGATIVDQIVSITPAENYVPQSVVQGESMTDNNMSMGGEDASPHAEAQTTSPSSGRVY 695
            LLSGATIVDQIV+IT AENYV +   Q   M DN M +G ++++   + +T    + R Y
Sbjct: 61   LLSGATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQEST--TQTKTNMDGNSRAY 118

Query: 694  VSKAQDVVSAMLAKGSALRQDAMNKARAFDEKHQLRANASARVNSFDKRVGLTEKFSVGI 515
            VSKAQDVV+ +LAKGSAL QDA+NKA+AFDEKHQLRANASA+V+SFDKRVGLTEK SVGI
Sbjct: 119  VSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGI 178

Query: 514  SVVNEKVKSVDQMLQVSDKTMAALMAAERKLNNTGSAVKSSRYVTAGTTWLNGAFGKVAK 335
            S VNEKVKSVDQ LQVSDKTMAA+ AAERKLN+TGSAVKSSRYVTAG  W +GAF KVA+
Sbjct: 179  SAVNEKVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFSKVAR 238

Query: 334  AGQVAGTKTKAKWSMALSNLTAKDPPIA 251
             GQVAG+KTK K+++A+SN+++KD PIA
Sbjct: 239  VGQVAGSKTKEKFNLAVSNMSSKDTPIA 266


>ref|XP_003624657.1| Protein vip1 [Medicago truncatula] gi|355499672|gb|AES80875.1|
            Protein vip1 [Medicago truncatula]
          Length = 267

 Score =  355 bits (912), Expect = 1e-95
 Identities = 187/263 (71%), Positives = 222/263 (84%), Gaps = 1/263 (0%)
 Frame = -1

Query: 1048 VVTRTVQVGHVSDLATEREIHEFFSFSGEIEHIEIPND-SRPKIAFVTFKDPQALEIALL 872
            V TRTVQV  +SDLATEREIHEFFSFSGEIEHI+I  +  +PK AFVTFKDP+ALEIALL
Sbjct: 3    VKTRTVQVKQLSDLATEREIHEFFSFSGEIEHIQIVREYGKPKTAFVTFKDPRALEIALL 62

Query: 871  LSGATIVDQIVSITPAENYVPQSVVQGESMTDNNMSMGGEDASPHAEAQTTSPSSGRVYV 692
            LSGATIVDQIVSI+P ENYV     Q   + +  +++  EDA+ + E +      GR+Y+
Sbjct: 63   LSGATIVDQIVSISPVENYVANRETQEVGVVEYAINIAPEDAASNTEEEKPG---GRIYL 119

Query: 691  SKAQDVVSAMLAKGSALRQDAMNKARAFDEKHQLRANASARVNSFDKRVGLTEKFSVGIS 512
            SKAQDVV+ MLAKGSA+RQDA+NKA+AFDEKHQL ANASA+V++FDKRVGLTEK +VG+S
Sbjct: 120  SKAQDVVTTMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVSNFDKRVGLTEKLTVGLS 179

Query: 511  VVNEKVKSVDQMLQVSDKTMAALMAAERKLNNTGSAVKSSRYVTAGTTWLNGAFGKVAKA 332
            VVNEKVKSVDQ L VSDKTMAA+ AAERKLN+TGSAVK+SRYVTAGTTWL GAF KVA+A
Sbjct: 180  VVNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTTWLTGAFSKVARA 239

Query: 331  GQVAGTKTKAKWSMALSNLTAKD 263
            G VAGTKT+ K++MA+SNLT+K+
Sbjct: 240  GNVAGTKTREKFNMAVSNLTSKE 262


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