BLASTX nr result

ID: Cnidium21_contig00016261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016261
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523247.1| tubulin beta chain, putative [Ricinus commun...   224   2e-56
gb|AAA66495.1| beta-tubulin [Oryza sativa]                            223   4e-56
pir||JC2510 beta-tubulin R1623 - rice                                 223   4e-56
ref|NP_001042761.1| Os01g0282800 [Oryza sativa Japonica Group] g...   223   4e-56
sp|Q9ZPN9.1|TBB2_ELEIN RecName: Full=Tubulin beta-2 chain; AltNa...   223   4e-56

>ref|XP_002523247.1| tubulin beta chain, putative [Ricinus communis]
           gi|223537543|gb|EEF39168.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 446

 Score =  224 bits (570), Expect = 2e-56
 Identities = 109/109 (100%), Positives = 109/109 (100%)
 Frame = -3

Query: 724 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLSMASTFIGNSTSIQ 545
           MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLSMASTFIGNSTSIQ
Sbjct: 316 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLSMASTFIGNSTSIQ 375

Query: 544 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 398
           EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424


>gb|AAA66495.1| beta-tubulin [Oryza sativa]
          Length = 447

 Score =  223 bits (567), Expect = 4e-56
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = -3

Query: 724 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLSMASTFIGNSTSIQ 545
           MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP+GLSMASTFIGNSTSIQ
Sbjct: 316 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQ 375

Query: 544 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 398
           EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424


>pir||JC2510 beta-tubulin R1623 - rice
          Length = 446

 Score =  223 bits (567), Expect = 4e-56
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = -3

Query: 724 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLSMASTFIGNSTSIQ 545
           MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP+GLSMASTFIGNSTSIQ
Sbjct: 316 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQ 375

Query: 544 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 398
           EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424


>ref|NP_001042761.1| Os01g0282800 [Oryza sativa Japonica Group]
           gi|74053560|sp|Q43594.2|TBB1_ORYSJ RecName: Full=Tubulin
           beta-1 chain; AltName: Full=Beta-1-tubulin
           gi|13486716|dbj|BAB39951.1| putative tubulin beta-4
           chain [Oryza sativa Japonica Group]
           gi|15408819|dbj|BAB64211.1| putative beta-tubulin 4
           [Oryza sativa Japonica Group]
           gi|113532292|dbj|BAF04675.1| Os01g0282800 [Oryza sativa
           Japonica Group] gi|125525429|gb|EAY73543.1| hypothetical
           protein OsI_01426 [Oryza sativa Indica Group]
           gi|215768577|dbj|BAH00806.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 447

 Score =  223 bits (567), Expect = 4e-56
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = -3

Query: 724 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLSMASTFIGNSTSIQ 545
           MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP+GLSMASTFIGNSTSIQ
Sbjct: 316 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQ 375

Query: 544 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 398
           EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424


>sp|Q9ZPN9.1|TBB2_ELEIN RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
           gi|4415992|gb|AAD20179.1| beta-tubulin 2 [Eleusine
           indica]
          Length = 448

 Score =  223 bits (567), Expect = 4e-56
 Identities = 108/109 (99%), Positives = 109/109 (100%)
 Frame = -3

Query: 724 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLSMASTFIGNSTSIQ 545
           MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP+GLSMASTFIGNSTSIQ
Sbjct: 316 MFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQ 375

Query: 544 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 398
           EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ
Sbjct: 376 EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424


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