BLASTX nr result
ID: Cnidium21_contig00016239
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00016239 (608 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635379.1| PREDICTED: HIV Tat-specific factor 1 homolog... 98 1e-18 emb|CBI18792.3| unnamed protein product [Vitis vinifera] 97 2e-18 ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|2... 91 2e-16 ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog... 89 5e-16 ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog... 89 8e-16 >ref|XP_003635379.1| PREDICTED: HIV Tat-specific factor 1 homolog [Vitis vinifera] Length = 408 Score = 97.8 bits (242), Expect = 1e-18 Identities = 56/107 (52%), Positives = 72/107 (67%), Gaps = 3/107 (2%) Frame = +3 Query: 3 LTESTLV*SEGRTEWQTLSTIPWVITGIFQQ-VHFP-LKNGDEYEHRPKEVMEA*AQTQA 176 L+E++L+ SEGR++WQ LS+IP + T I Q V +P + + DE+E KEV EA A Sbjct: 55 LSENSLLWSEGRSDWQPLSSIPELTTAISQPGVDWPPINDEDEFEKWQKEVREAEALKNG 114 Query: 177 EMSKTDSKKLND-DAERSSTPPDGKEEFTDDDGTTYEGPRGLRAWVP 314 S + D D ER STPPDG++EFTDDDGTTY+ RGLRAWVP Sbjct: 115 SASGSVGGDFGDEDNERPSTPPDGEDEFTDDDGTTYKWDRGLRAWVP 161 >emb|CBI18792.3| unnamed protein product [Vitis vinifera] Length = 486 Score = 97.1 bits (240), Expect = 2e-18 Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 7/111 (6%) Frame = +3 Query: 3 LTESTLV*SEGRTEWQTLSTIPWVITGIFQ------QVHFPLKNGDEYEHRPKEVMEA*A 164 L+E++L+ SEGR++WQ LS+IP + T I Q P+ + DE+E KEV EA A Sbjct: 55 LSENSLLWSEGRSDWQPLSSIPELTTAISQPGVDCSSAGPPINDEDEFEKWQKEVREAEA 114 Query: 165 QTQAEMSKTDSKKLND-DAERSSTPPDGKEEFTDDDGTTYEGPRGLRAWVP 314 S + D D ER STPPDG++EFTDDDGTTY+ RGLRAWVP Sbjct: 115 LKNGSASGSVGGDFGDEDNERPSTPPDGEDEFTDDDGTTYKWDRGLRAWVP 165 >ref|XP_002316170.1| predicted protein [Populus trichocarpa] gi|222865210|gb|EEF02341.1| predicted protein [Populus trichocarpa] Length = 497 Score = 90.9 bits (224), Expect = 2e-16 Identities = 55/117 (47%), Positives = 73/117 (62%), Gaps = 13/117 (11%) Frame = +3 Query: 3 LTESTLV*SEGRTEWQTLSTIPWVITGIFQQVHFPLK------NGDEYEHRPKEVMEA*A 164 L ESTLV SEGR++WQ LS+IP +++G QQ + + DE+E +EV EA Sbjct: 54 LLESTLVWSEGRSDWQPLSSIPELMSGTSQQGSDYSRAVSSNDDEDEFEKWQREVKEA-- 111 Query: 165 QTQAEMSKTDSKKLN-------DDAERSSTPPDGKEEFTDDDGTTYEGPRGLRAWVP 314 + +AE K S N DD++R +PPDG++EFTDDDGTTY+ R LRAWVP Sbjct: 112 EAEAERLKNGSLPGNTGDDFGIDDSDRILSPPDGEDEFTDDDGTTYKWDRSLRAWVP 168 >ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus] Length = 496 Score = 89.4 bits (220), Expect = 5e-16 Identities = 52/111 (46%), Positives = 65/111 (58%), Gaps = 7/111 (6%) Frame = +3 Query: 3 LTESTLV*SEGRTEWQTLSTIPWVITGIFQQ-----VHFPLKNGD--EYEHRPKEVMEA* 161 L ESTL SEG++EWQ LS+IP + T ++ Q P N D E E KEV E Sbjct: 44 LLESTLAWSEGQSEWQPLSSIPGLTTEVYGQDSNLPTTVPANNNDDDELEKYQKEVGETE 103 Query: 162 AQTQAEMSKTDSKKLNDDAERSSTPPDGKEEFTDDDGTTYEGPRGLRAWVP 314 A T+ + + D ER +TPP+G+EEFTDDDGT Y+ R LRAWVP Sbjct: 104 ATTKVPSGGRNFGLVEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVP 154 >ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max] Length = 503 Score = 88.6 bits (218), Expect = 8e-16 Identities = 51/114 (44%), Positives = 66/114 (57%), Gaps = 10/114 (8%) Frame = +3 Query: 3 LTESTLV*SEGRTEWQTLSTIPWVITGIFQQ-----VHFPLKNGDEYEHRPKEVMEA*AQ 167 L+E+T V SEGR+EWQ LS++ + I QQ + DE+E KE+ EA AQ Sbjct: 53 LSENTFVWSEGRSEWQPLSSVSDLWAQINQQGPDSSTTVSAPDVDEFERWQKEIQEAEAQ 112 Query: 168 TQAE-----MSKTDSKKLNDDAERSSTPPDGKEEFTDDDGTTYEGPRGLRAWVP 314 + S +D+ER STPP+G+EEFTDDDGT Y+ R LRAWVP Sbjct: 113 VEGSEFGSLSGNAGSTGAGEDSERPSTPPEGEEEFTDDDGTVYKWDRNLRAWVP 166