BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016235
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    94   3e-17
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        86   5e-15
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            86   9e-15
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    86   9e-15
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...    83   6e-14

>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
 Frame = +2

Query: 20  KILKPFQLFHHLLDDENFLSTIESAW-SGIITGDPWFXXXXXXXXXXXXXXDMNKRK-GN 193
           K  +PF+ F+ LL +  FL+ +   W S  + G   F              D ++    N
Sbjct: 236 KAKRPFKFFNFLLKNPEFLNLVWDVWYSTNVVGSSMFRVSKKLKALKKPIKDFSRLNYSN 295

Query: 194 LHENVTLARDALNQFQSSLGPNPTRSQREEEQKLMFDMQLALSKEEQLLRQKSRINWLAK 373
           L +    A + L  FQ+    NP+      E +     Q+  + EE   RQ+SR+ W A+
Sbjct: 296 LEKRTEEAHETLLSFQNLTLDNPSLENAAHELEAQRKWQILATAEESFFRQRSRVTWFAE 355

Query: 374 GDGNNGFFFNVCKGRWNSNKLLKLVDDNGVAHTTQKEISELAVCYFKGVMGS-----TTV 538
           GDGN  +F  +   R + N +  LVDD+G    +Q+ I++    YF+ ++       +  
Sbjct: 356 GDGNTRYFHRMADSRKSVNTITTLVDDSGTQIDSQQGIADHCALYFENLLSDDNDPYSLE 415

Query: 539 VDDFPINLNFPKLEDDKIAELDEPFTSADILRTFKYMATNRSPGPD 676
            DD  + L + +    ++A+L+  F+  DI   F  + +N++ GPD
Sbjct: 416 QDDMNLLLTY-RCPYSQVADLEAMFSDEDIKAAFFGLPSNKACGPD 460


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 8/229 (3%)
 Frame = +2

Query: 14  SEKILKPFQLFHHLLDDENFLSTIESAWSGI-ITGDPWFXXXXXXXXXXXXXXDMNKRK- 187
           S K  +PF+ F++LL + +FL+ +   W  + + G   F              D ++   
Sbjct: 242 SIKAKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFSRLNY 301

Query: 188 GNLHENVTLARDALNQFQSSLGPNPTRSQREEEQKLMFDMQLALSKEEQLLRQKSRINWL 367
             L +    A D L   Q     +PT      E +      +  + EE   RQKSRI+W 
Sbjct: 302 SELEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHILTAAEESFFRQKSRISWF 361

Query: 368 AKGDGNNGFFFNVCKGRWNSNKLLKLVDDNGVAHTTQKEISELAVCYFKGVMGSTTVVDD 547
           A+GDGN  +F  +   R +SN +  L D NG    +Q+ I +L   YF  ++G    VD 
Sbjct: 362 AEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLGDE--VDP 419

Query: 548 FPINLNFPKL------EDDKIAELDEPFTSADILRTFKYMATNRSPGPD 676
           + +  N   L         ++ EL+  F++ DI      +  N+S GPD
Sbjct: 420 YLMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKSCGPD 468


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
 Frame = +2

Query: 29  KPFQLFHHLLDDENFLSTIESAW-SGIITGDPWFXXXXXXXXXXXXXXDMNKRK-GNLHE 202
           +PF+ F+ LL +E+FL+ +   W S  + G   +              D ++     +  
Sbjct: 107 RPFKFFNFLLKNEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIEL 166

Query: 203 NVTLARDALNQFQSSLGPNPTRSQREEEQKLMFDMQLALSKEEQLLRQKSRINWLAKGDG 382
               A + L   Q+    NP+ S    E +      L    EE    Q+SR++W A+GD 
Sbjct: 167 RTKEAHELLITCQNLTLANPSVSNAALELEAQRKWVLLSCAEESFFHQRSRVSWFAEGDS 226

Query: 383 NNGFFFNVCKGRWNSNKLLKLVDDNGVAHTTQKEISELAVCYFKGVMGS-----TTVVDD 547
           N  +F  +   R + N +  LVD NG+   +Q+ I +  V Y++ ++GS     +   +D
Sbjct: 227 NTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQED 286

Query: 548 FPINLNFPKLEDDKIAELDEPFTSADILRTFKYMATNRSPGPD 676
             + L + +   D+ +EL++ FT  +I   FK +  N++ GPD
Sbjct: 287 MNLLLTY-RCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPD 328


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 7/223 (3%)
 Frame = +2

Query: 29  KPFQLFHHLLDDENFLSTIESAW-SGIITGDPWFXXXXXXXXXXXXXXDMNKRK-GNLHE 202
           +PF+ F+ LL +E+FL+ +   W S  + G   +              D ++     +  
Sbjct: 107 RPFKFFNFLLKNEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIEL 166

Query: 203 NVTLARDALNQFQSSLGPNPTRSQREEEQKLMFDMQLALSKEEQLLRQKSRINWLAKGDG 382
               A + L   Q+    NP+ S    E +      L    EE    Q+SR++W A+GD 
Sbjct: 167 RTKEAHELLITCQNLTLANPSVSNAALELEAQRKWVLLSCAEESFFHQRSRVSWFAEGDS 226

Query: 383 NNGFFFNVCKGRWNSNKLLKLVDDNGVAHTTQKEISELAVCYFKGVMGS-----TTVVDD 547
           N  +F  +   R + N +  LVD NG+   +Q+ I +  V Y++ ++GS     +   +D
Sbjct: 227 NTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQED 286

Query: 548 FPINLNFPKLEDDKIAELDEPFTSADILRTFKYMATNRSPGPD 676
             + L + +   D+ +EL++ FT  +I   FK +  N++ GPD
Sbjct: 287 MNLLLTY-RCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPD 328


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
           thaliana]
          Length = 1253

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 7/223 (3%)
 Frame = +2

Query: 29  KPFQLFHHLLDDENFLSTIESAWSGI-ITGDPWFXXXXXXXXXXXXXXDMNKRK-GNLHE 202
           +PF+ ++ LL + +F+S +   W  I + G   F                +     NL +
Sbjct: 196 RPFRFYNFLLQNPDFISLVGELWYSINVVGSSMFKMSKKLKALKNPIRTFSMENFSNLEK 255

Query: 203 NVTLARDALNQFQSSLGPNPTRSQREEEQKLMFDMQLALSKEEQLLRQKSRINWLAKGDG 382
            V  A + +   Q+    +PT      E +      + +  EE    Q+SR+ W+ +GD 
Sbjct: 256 RVKEAHNLVLYRQNKTLSDPTIPNAALEMEAQRKWLILVKAEESFFCQRSRVTWMGEGDS 315

Query: 383 NNGFFFNVCKGRWNSNKLLKLVDDNGVAHTTQKEISELAVCYFKGVMGSTT-----VVDD 547
           N  +F  +   R   N +  ++DDNGV   TQ  I E  + YF  ++G        + +D
Sbjct: 316 NTSYFHRMADSRKAVNTIHIIIDDNGVKIDTQLGIKEHCIEYFSNLLGGEVGPPMLIQED 375

Query: 548 FPINLNFPKLEDDKIAELDEPFTSADILRTFKYMATNRSPGPD 676
           F + L F +   D+  EL   F+  DI   F    +N++ GPD
Sbjct: 376 FDLLLPF-RCSHDQKKELAMSFSRQDIKSAFFSFPSNKTSGPD 417