BLASTX nr result
ID: Cnidium21_contig00016232
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00016232 (469 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-l... 70 2e-12 gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota] 70 2e-12 dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare] 70 4e-12 dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgar... 70 4e-12 ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-l... 68 4e-12 >ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max] Length = 652 Score = 70.1 bits (170), Expect(2) = 2e-12 Identities = 36/81 (44%), Positives = 51/81 (62%) Frame = -2 Query: 465 PCHENSEESLLSITNLDKSVDKSTLYRIFSEYGKILSIQVCTDASGLCSGSAFVYYNCFA 286 P S + + I NLDK++D L+ FS +G ILS ++ TDASGL G FV ++ Sbjct: 113 PSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQFDSEE 172 Query: 285 SAQTAIEHLDGALINNKEVQI 223 SAQ AI+ L+G LIN+K+V + Sbjct: 173 SAQNAIDKLNGMLINDKQVYV 193 Score = 26.9 bits (58), Expect(2) = 2e-12 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = -3 Query: 125 FFSKYGPIAS--VSEYTHHKEDRFGLVTFENPE 33 FF +YG I S + K FG V FENP+ Sbjct: 231 FFGEYGTITSAVIMRDADGKSRCFGFVNFENPD 263 >gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota] Length = 658 Score = 70.1 bits (170), Expect(2) = 2e-12 Identities = 35/81 (43%), Positives = 50/81 (61%) Frame = -2 Query: 465 PCHENSEESLLSITNLDKSVDKSTLYRIFSEYGKILSIQVCTDASGLCSGSAFVYYNCFA 286 P S + I NLDKS+D L+ FS +G I+S ++ TDASG G FV Y+ Sbjct: 120 PTDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIISCKIATDASGQSKGYGFVQYDSEE 179 Query: 285 SAQTAIEHLDGALINNKEVQI 223 +AQTAI+ L+G L+N+K+V + Sbjct: 180 AAQTAIDKLNGMLMNDKQVYV 200 Score = 26.6 bits (57), Expect(2) = 2e-12 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Frame = -3 Query: 122 FSKYGPIASV--SEYTHHKEDRFGLVTFENPE 33 F +YG I SV K FG V FENPE Sbjct: 239 FGEYGTITSVVVMRDADGKSKCFGFVNFENPE 270 >dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 663 Score = 69.7 bits (169), Expect(2) = 4e-12 Identities = 37/83 (44%), Positives = 48/83 (57%) Frame = -2 Query: 465 PCHENSEESLLSITNLDKSVDKSTLYRIFSEYGKILSIQVCTDASGLCSGSAFVYYNCFA 286 P S + + I NLDKS+D LY FS +G ILS +V T+ SG G FV Y Sbjct: 122 PSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDE 181 Query: 285 SAQTAIEHLDGALINNKEVQIHP 217 SAQ AI L+G L+N+K+V + P Sbjct: 182 SAQNAINELNGMLLNDKKVYVGP 204 Score = 26.2 bits (56), Expect(2) = 4e-12 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = -3 Query: 185 NLYLSYFLLTAQHPNLFSGIFFSKYGPIASVS--EYTHHKEDRFGLVTFENPE 33 N+Y+ + NL F +GPI SV K FG V FENP+ Sbjct: 222 NVYVKNLSESTTEDNLKE--LFGNFGPITSVIVVRADDGKSRCFGFVNFENPD 272 >dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 663 Score = 69.7 bits (169), Expect(2) = 4e-12 Identities = 37/83 (44%), Positives = 48/83 (57%) Frame = -2 Query: 465 PCHENSEESLLSITNLDKSVDKSTLYRIFSEYGKILSIQVCTDASGLCSGSAFVYYNCFA 286 P S + + I NLDKS+D LY FS +G ILS +V T+ SG G FV Y Sbjct: 122 PSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGFVQYEQDE 181 Query: 285 SAQTAIEHLDGALINNKEVQIHP 217 SAQ AI L+G L+N+K+V + P Sbjct: 182 SAQNAINELNGMLLNDKKVYVGP 204 Score = 26.2 bits (56), Expect(2) = 4e-12 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = -3 Query: 185 NLYLSYFLLTAQHPNLFSGIFFSKYGPIASVS--EYTHHKEDRFGLVTFENPE 33 N+Y+ + NL F +GPI SV K FG V FENP+ Sbjct: 222 NVYVKNLSESTTEDNLKE--LFGNFGPITSVIVVRADDGKSRCFGFVNFENPD 272 >ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium distachyon] Length = 663 Score = 67.8 bits (164), Expect(2) = 4e-12 Identities = 36/83 (43%), Positives = 48/83 (57%) Frame = -2 Query: 465 PCHENSEESLLSITNLDKSVDKSTLYRIFSEYGKILSIQVCTDASGLCSGSAFVYYNCFA 286 P S + + I NLDKS+D L+ FS +G ILS +V T+ SG G FV Y Sbjct: 122 PSSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILSCKVATEISGESKGYGFVQYEQDE 181 Query: 285 SAQTAIEHLDGALINNKEVQIHP 217 SAQ AI L+G L+N+K+V + P Sbjct: 182 SAQNAINELNGMLLNDKKVYVGP 204 Score = 28.1 bits (61), Expect(2) = 4e-12 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = -3 Query: 185 NLYLSYFLLTAQHPNLFSGIFFSKYGPIASVS--EYTHHKEDRFGLVTFENPE 33 N+Y+ + NL F K+GPI SV K FG V FENP+ Sbjct: 222 NVYVKNLSESTTEDNLKE--MFGKFGPITSVIVVRADDGKSRCFGFVNFENPD 272