BLASTX nr result

ID: Cnidium21_contig00016180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016180
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871714.1| hypothetical protein ARALYDRAFT_488483 [Arab...    97   1e-18
ref|NP_001031890.1| Vps51/Vps67 family (components of vesicular ...    95   7e-18
ref|NP_974788.1| Vps51/Vps67 family (components of vesicular tra...    95   7e-18
ref|NP_197134.1| Vps51/Vps67 family (components of vesicular tra...    95   7e-18
ref|NP_001190320.1| Vps51/Vps67 family (components of vesicular ...    95   7e-18

>ref|XP_002871714.1| hypothetical protein ARALYDRAFT_488483 [Arabidopsis lyrata subsp.
           lyrata] gi|297317551|gb|EFH47973.1| hypothetical protein
           ARALYDRAFT_488483 [Arabidopsis lyrata subsp. lyrata]
          Length = 1067

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 61/156 (39%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
 Frame = -1

Query: 461 LLD--LSVDVYADALAAIMFIDRLP---VLDLFLDSRMSCILQNKAACSVDNLSHVISVL 297
           LLD  L +  Y DAL A+  +D L    VLDLFLDSR + ILQ   AC+ ++   V+SV 
Sbjct: 210 LLDPGLGLGAYVDALTAVSVVDELDPEQVLDLFLDSRKTWILQKLNACTGEDAGEVVSVF 269

Query: 296 CDNSNIVQLTLAQVGQLFLQLSPHMVXXXXXXXXXXXXXPASHLFSGIPNPDFEIVSWNS 117
           CD  +++Q+T+ QVG+LFLQ    M              PAS LF GIPNP+ E+  W S
Sbjct: 270 CDVLSVIQVTVGQVGELFLQALTDM---PLFYKTILSTPPASQLFGGIPNPEEEVGLWKS 326

Query: 116 FRVTLIGLF-----DQTKHFCVQWFDDCGRRMLSDV 24
           FR  L  +      +     C+ W  +CG +++  V
Sbjct: 327 FRDKLESVMVILDKNDVSKACLTWLRECGGQIVGKV 362


>ref|NP_001031890.1| Vps51/Vps67 family (components of vesicular transport) protein
           [Arabidopsis thaliana] gi|332004893|gb|AED92276.1|
           Vps51/Vps67 family (components of vesicular transport)
           protein [Arabidopsis thaliana]
          Length = 1029

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 61/156 (39%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
 Frame = -1

Query: 461 LLD--LSVDVYADALAAIMFIDRLP---VLDLFLDSRMSCILQNKAACSVDNLSHVISVL 297
           LLD  L +  Y DAL A+  +D L    VL+LFLDSR + ILQ   AC+ ++   V+ V 
Sbjct: 211 LLDPGLGLGAYVDALTAVAVVDELDPEQVLELFLDSRKTWILQKLNACTGEDAGEVVLVF 270

Query: 296 CDNSNIVQLTLAQVGQLFLQLSPHMVXXXXXXXXXXXXXPASHLFSGIPNPDFEIVSWNS 117
           CD  +++Q+T+ QVG+LFLQ    M              PAS LF GIPNP+ E+  W S
Sbjct: 271 CDVLSVIQVTVGQVGELFLQALTDM---PLFYKTILSTPPASQLFGGIPNPEEEVELWKS 327

Query: 116 FR-----VTLIGLFDQTKHFCVQWFDDCGRRMLSDV 24
           FR     V LI   +     C+ W  +CG +++  V
Sbjct: 328 FRDKLESVMLILDKNDVSKSCLTWLRECGGQIVGKV 363


>ref|NP_974788.1| Vps51/Vps67 family (components of vesicular transport) protein
           [Arabidopsis thaliana] gi|332004892|gb|AED92275.1|
           Vps51/Vps67 family (components of vesicular transport)
           protein [Arabidopsis thaliana]
          Length = 1034

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 61/156 (39%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
 Frame = -1

Query: 461 LLD--LSVDVYADALAAIMFIDRLP---VLDLFLDSRMSCILQNKAACSVDNLSHVISVL 297
           LLD  L +  Y DAL A+  +D L    VL+LFLDSR + ILQ   AC+ ++   V+ V 
Sbjct: 211 LLDPGLGLGAYVDALTAVAVVDELDPEQVLELFLDSRKTWILQKLNACTGEDAGEVVLVF 270

Query: 296 CDNSNIVQLTLAQVGQLFLQLSPHMVXXXXXXXXXXXXXPASHLFSGIPNPDFEIVSWNS 117
           CD  +++Q+T+ QVG+LFLQ    M              PAS LF GIPNP+ E+  W S
Sbjct: 271 CDVLSVIQVTVGQVGELFLQALTDM---PLFYKTILSTPPASQLFGGIPNPEEEVELWKS 327

Query: 116 FR-----VTLIGLFDQTKHFCVQWFDDCGRRMLSDV 24
           FR     V LI   +     C+ W  +CG +++  V
Sbjct: 328 FRDKLESVMLILDKNDVSKSCLTWLRECGGQIVGKV 363


>ref|NP_197134.1| Vps51/Vps67 family (components of vesicular transport) protein
           [Arabidopsis thaliana] gi|9759112|dbj|BAB09597.1| low
           density lipoprotein B-like protein [Arabidopsis
           thaliana] gi|332004891|gb|AED92274.1| Vps51/Vps67 family
           (components of vesicular transport) protein [Arabidopsis
           thaliana]
          Length = 1068

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 61/156 (39%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
 Frame = -1

Query: 461 LLD--LSVDVYADALAAIMFIDRLP---VLDLFLDSRMSCILQNKAACSVDNLSHVISVL 297
           LLD  L +  Y DAL A+  +D L    VL+LFLDSR + ILQ   AC+ ++   V+ V 
Sbjct: 211 LLDPGLGLGAYVDALTAVAVVDELDPEQVLELFLDSRKTWILQKLNACTGEDAGEVVLVF 270

Query: 296 CDNSNIVQLTLAQVGQLFLQLSPHMVXXXXXXXXXXXXXPASHLFSGIPNPDFEIVSWNS 117
           CD  +++Q+T+ QVG+LFLQ    M              PAS LF GIPNP+ E+  W S
Sbjct: 271 CDVLSVIQVTVGQVGELFLQALTDM---PLFYKTILSTPPASQLFGGIPNPEEEVELWKS 327

Query: 116 FR-----VTLIGLFDQTKHFCVQWFDDCGRRMLSDV 24
           FR     V LI   +     C+ W  +CG +++  V
Sbjct: 328 FRDKLESVMLILDKNDVSKSCLTWLRECGGQIVGKV 363


>ref|NP_001190320.1| Vps51/Vps67 family (components of vesicular transport) protein
           [Arabidopsis thaliana] gi|332004894|gb|AED92277.1|
           Vps51/Vps67 family (components of vesicular transport)
           protein [Arabidopsis thaliana]
          Length = 1035

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 61/156 (39%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
 Frame = -1

Query: 461 LLD--LSVDVYADALAAIMFIDRLP---VLDLFLDSRMSCILQNKAACSVDNLSHVISVL 297
           LLD  L +  Y DAL A+  +D L    VL+LFLDSR + ILQ   AC+ ++   V+ V 
Sbjct: 209 LLDPGLGLGAYVDALTAVAVVDELDPEQVLELFLDSRKTWILQKLNACTGEDAGEVVLVF 268

Query: 296 CDNSNIVQLTLAQVGQLFLQLSPHMVXXXXXXXXXXXXXPASHLFSGIPNPDFEIVSWNS 117
           CD  +++Q+T+ QVG+LFLQ    M              PAS LF GIPNP+ E+  W S
Sbjct: 269 CDVLSVIQVTVGQVGELFLQALTDM---PLFYKTILSTPPASQLFGGIPNPEEEVELWKS 325

Query: 116 FR-----VTLIGLFDQTKHFCVQWFDDCGRRMLSDV 24
           FR     V LI   +     C+ W  +CG +++  V
Sbjct: 326 FRDKLESVMLILDKNDVSKSCLTWLRECGGQIVGKV 361


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