BLASTX nr result

ID: Cnidium21_contig00016168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016168
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299588.1| predicted protein [Populus trichocarpa] gi|2...    89   8e-16
ref|XP_002304133.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-15
ref|XP_002339178.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
gb|AFK36710.1| unknown [Lotus japonicus]                               82   8e-14
ref|XP_003627297.1| Serine rich protein [Medicago truncatula] gi...    77   3e-12

>ref|XP_002299588.1| predicted protein [Populus trichocarpa] gi|222846846|gb|EEE84393.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
 Frame = -3

Query: 520 SPFYMNSNNDNFRRTRNYDSKWSSGFVLPVLLAGLIVAIKXXXXXXXXXXXSKPVHRNFA 341
           SP Y+   ND+     N+++KWSSGFVLP++LAGLI+AI+              VHR  A
Sbjct: 31  SPLYVKRKNDHTGYF-NHETKWSSGFVLPMVLAGLIIAIRTTSSSMS-------VHRGAA 82

Query: 340 TDSVEE-SVSQTVRTGSSSWGVAAVLVTLIFLLSWQNSAQHFFWR 209
              +     S  +R GSSSWG+A VLV L+ +LSWQ+S Q FFWR
Sbjct: 83  ASFIPSPDPSWVLRIGSSSWGLAGVLVMLVLVLSWQDSVQEFFWR 127


>ref|XP_002304133.1| predicted protein [Populus trichocarpa] gi|222841565|gb|EEE79112.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 49/104 (47%), Positives = 64/104 (61%)
 Frame = -3

Query: 520 SPFYMNSNNDNFRRTRNYDSKWSSGFVLPVLLAGLIVAIKXXXXXXXXXXXSKPVHRNFA 341
           SP Y+   ND+ R   NY++KWSSGFVLP++LAGLI+AI+           S+      A
Sbjct: 32  SPLYVKRKNDHTRYF-NYETKWSSGFVLPMVLAGLIIAIRTTSSSMSARRGSR------A 84

Query: 340 TDSVEESVSQTVRTGSSSWGVAAVLVTLIFLLSWQNSAQHFFWR 209
           +       S  +R GSSSWG+A VLV L+ +LSWQ+S Q FFWR
Sbjct: 85  SFIPSPDPSWVLRIGSSSWGLAGVLVMLMLVLSWQDSVQEFFWR 128


>ref|XP_002339178.1| predicted protein [Populus trichocarpa] gi|222874559|gb|EEF11690.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 47/104 (45%), Positives = 62/104 (59%)
 Frame = -3

Query: 520 SPFYMNSNNDNFRRTRNYDSKWSSGFVLPVLLAGLIVAIKXXXXXXXXXXXSKPVHRNFA 341
           SP Y+   ND+ R   NY++ WSSGFVLP++LAGLI+AI+           S+      A
Sbjct: 32  SPLYVKRKNDHTRYF-NYETNWSSGFVLPMVLAGLIIAIRTTSSSMSARRGSR------A 84

Query: 340 TDSVEESVSQTVRTGSSSWGVAAVLVTLIFLLSWQNSAQHFFWR 209
           +       S  +R GSS WG+A VLV L+ +LSWQ+S Q FFWR
Sbjct: 85  SFIPSPDPSWVLRIGSSPWGLAGVLVMLMLVLSWQDSVQEFFWR 128


>gb|AFK36710.1| unknown [Lotus japonicus]
          Length = 124

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 46/104 (44%), Positives = 61/104 (58%)
 Frame = -3

Query: 520 SPFYMNSNNDNFRRTRNYDSKWSSGFVLPVLLAGLIVAIKXXXXXXXXXXXSKPVHRNFA 341
           SP Y NS +D     R+Y+SKWSSGFVLP++LAGLI+AI+            +      A
Sbjct: 31  SPLYANSRSDR----RHYESKWSSGFVLPMVLAGLIIAIRTTSSSRSSVSSPR------A 80

Query: 340 TDSVEESVSQTVRTGSSSWGVAAVLVTLIFLLSWQNSAQHFFWR 209
           +       S  +R GSSSWG+A VLV L+ + +W+ S Q FFWR
Sbjct: 81  SLLPSPEPSWVLRIGSSSWGLAMVLVMLMLVHNWKASVQEFFWR 124


>ref|XP_003627297.1| Serine rich protein [Medicago truncatula]
           gi|66947623|emb|CAJ00007.1| serine rich protein
           [Medicago truncatula] gi|355521319|gb|AET01773.1| Serine
           rich protein [Medicago truncatula]
          Length = 127

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 46/105 (43%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
 Frame = -3

Query: 520 SPFYMNSNNDNFRRTRNYDSKW-SSGFVLPVLLAGLIVAIKXXXXXXXXXXXSKPVHRNF 344
           SP Y+NS +D     R Y+SKW SSGFVLP++L GLI+AIK           S     + 
Sbjct: 30  SPLYVNSKSDR----RYYESKWTSSGFVLPMILFGLIIAIKRTSSSSSSCVSSSSTKGSL 85

Query: 343 ATDSVEESVSQTVRTGSSSWGVAAVLVTLIFLLSWQNSAQHFFWR 209
                    S  +R GSSSWG+AAVLV L+ +L WQ S Q   W+
Sbjct: 86  LPS---HDPSLVLRIGSSSWGLAAVLVMLMLVLHWQGSVQELLWK 127


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