BLASTX nr result

ID: Cnidium21_contig00016138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016138
         (1177 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521816.1| radical sam protein, putative [Ricinus commu...   342   1e-91
ref|XP_002327268.1| predicted protein [Populus trichocarpa] gi|2...   328   2e-87
ref|XP_002268292.2| PREDICTED: CDK5 regulatory subunit-associate...   310   3e-82
emb|CBI18159.3| unnamed protein product [Vitis vinifera]              310   3e-82
ref|XP_004141564.1| PREDICTED: threonylcarbamoyladenosine tRNA m...   294   3e-77

>ref|XP_002521816.1| radical sam protein, putative [Ricinus communis]
            gi|223539029|gb|EEF40626.1| radical sam protein, putative
            [Ricinus communis]
          Length = 630

 Score =  342 bits (877), Expect = 1e-91
 Identities = 170/263 (64%), Positives = 200/263 (76%)
 Frame = +2

Query: 2    IICGFPGETDDDFAQTVRLVKDYKFPQVHISQFYPRPGTPAARMKKVPSTSVKKRSRELT 181
            IICGFPGETDDDFAQTV L+ +YK PQVHISQFYPRPGTPAARMKKVPS  VKKRSRELT
Sbjct: 355  IICGFPGETDDDFAQTVSLINEYKLPQVHISQFYPRPGTPAARMKKVPSNIVKKRSRELT 414

Query: 182  SVFESFTPYNGMEGKIERIWITEIATDGKHLVGHTKGYMQVLVVGPGSMLGTSAIIRITS 361
            +VFE+FTPYNGMEG++ERIWITEIATDG HLVGHTKGY+QVLV+ P +MLGTSAI++ITS
Sbjct: 415  AVFEAFTPYNGMEGRVERIWITEIATDGIHLVGHTKGYVQVLVIAPETMLGTSAIVKITS 474

Query: 362  VGRWSVFGEVIETLNLPKDNAESKERSDRSEKCCSPSNLEESCACVGELDACACGHESCG 541
            VGRWSVFGEVI+TLN       S E+     K    S+  E+CAC  E ++CACG ESCG
Sbjct: 475  VGRWSVFGEVIQTLNQTNRGVASAEKMPSGGKYSPCSDPCETCACSKEPESCACGPESCG 534

Query: 542  GQNLTEEKGGSLPMNDSWADDRSNINVFGWLLRKRENHRTKKIEDDRSAQHIMRQEIASG 721
            GQN  EE   ++  ND   +DR+  N+ GWLLRKR+N   K +E++ + + I +QE   G
Sbjct: 535  GQNPLEE--SAIAQNDMLLEDRNRRNLIGWLLRKRKNQTQKIVENNIALESIKKQEWTKG 592

Query: 722  SAHMWTAVDRLLLGGMCASFFTI 790
            +  MW AVDR LLGGM  S  TI
Sbjct: 593  TFSMWGAVDRALLGGMLVSLVTI 615


>ref|XP_002327268.1| predicted protein [Populus trichocarpa] gi|222835638|gb|EEE74073.1|
            predicted protein [Populus trichocarpa]
          Length = 612

 Score =  328 bits (840), Expect = 2e-87
 Identities = 163/262 (62%), Positives = 196/262 (74%)
 Frame = +2

Query: 2    IICGFPGETDDDFAQTVRLVKDYKFPQVHISQFYPRPGTPAARMKKVPSTSVKKRSRELT 181
            IICGFPGETD DF+QTV L+K YKF QVHISQFYPRPGTPAARMKKVPS  VK+RSRELT
Sbjct: 337  IICGFPGETDKDFSQTVNLIKAYKFAQVHISQFYPRPGTPAARMKKVPSNIVKQRSRELT 396

Query: 182  SVFESFTPYNGMEGKIERIWITEIATDGKHLVGHTKGYMQVLVVGPGSMLGTSAIIRITS 361
            SVFE+FTPYNGMEG++ERIWIT+IA DG HLVGHTK Y+QVL+V   SMLGTSAI++ITS
Sbjct: 397  SVFEAFTPYNGMEGRVERIWITDIAADGIHLVGHTKAYVQVLIVAQESMLGTSAIVKITS 456

Query: 362  VGRWSVFGEVIETLNLPKDNAESKERSDRSEKCCSPSNLEESCACVGELDACACGHESCG 541
            VGRWSVFGEVIETLN     ++S E+    EKC   S+  +SCAC GE + CACG ESCG
Sbjct: 457  VGRWSVFGEVIETLNQINQKSKSVEKMLSEEKCSPCSDPCDSCACSGESEPCACGPESCG 516

Query: 542  GQNLTEEKGGSLPMNDSWADDRSNINVFGWLLRKRENHRTKKIEDDRSAQHIMRQEIASG 721
            GQ+  E+    +  N+   +D++  N+ GWLLRKR+N   K +E+  ++    +QE A G
Sbjct: 517  GQSTIEQ--SDVLQNEVLREDQNRRNLIGWLLRKRKNQAQKMVENGIASGSQKKQEWAKG 574

Query: 722  SAHMWTAVDRLLLGGMCASFFT 787
            +   W  VDR LLGG+  S FT
Sbjct: 575  APEEWGVVDRALLGGLIVSVFT 596


>ref|XP_002268292.2| PREDICTED: CDK5 regulatory subunit-associated protein 1-like 1-like
            [Vitis vinifera]
          Length = 622

 Score =  310 bits (795), Expect = 3e-82
 Identities = 158/256 (61%), Positives = 190/256 (74%)
 Frame = +2

Query: 2    IICGFPGETDDDFAQTVRLVKDYKFPQVHISQFYPRPGTPAARMKKVPSTSVKKRSRELT 181
            IICGFPGETD++FAQTV L+++Y+FPQVHISQFYPRPGTPAARMKKVPS  VKKRSRELT
Sbjct: 348  IICGFPGETDEEFAQTVSLIQEYRFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELT 407

Query: 182  SVFESFTPYNGMEGKIERIWITEIATDGKHLVGHTKGYMQVLVVGPGSMLGTSAIIRITS 361
            S+FE+FTPYNGMEG++ERIWI+EIATDG HLVGHTKGYMQVLVV P S++GTSAI++ITS
Sbjct: 408  SIFEAFTPYNGMEGRVERIWISEIATDGIHLVGHTKGYMQVLVVAPRSLMGTSAIVKITS 467

Query: 362  VGRWSVFGEVIETLNLPKDNAESKERSDRSEKCCSPSNLEESCACVGELDACACGHESCG 541
            VGRWSVFGE+IETLN   DN    E      KC   S   E CAC  E + CAC  +SC 
Sbjct: 468  VGRWSVFGELIETLNQVNDNISLNEEKFSLGKCSPCSVPGEICACSREAEPCACEPQSCE 527

Query: 542  GQNLTEEKGGSLPMNDSWADDRSNINVFGWLLRKRENHRTKKIEDDRSAQHIMRQEIASG 721
            G+   EE  GS+   D   +   N N+F WLLR+R+NH  K+IE+  +     ++E   G
Sbjct: 528  GKISMEE--GSVSRKDMLPE---NQNLFKWLLRRRKNHGQKRIENGIAWGSKEKEERDRG 582

Query: 722  SAHMWTAVDRLLLGGM 769
              + W  VDR+LLGG+
Sbjct: 583  CMNHWGLVDRVLLGGI 598


>emb|CBI18159.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  310 bits (795), Expect = 3e-82
 Identities = 158/256 (61%), Positives = 190/256 (74%)
 Frame = +2

Query: 2    IICGFPGETDDDFAQTVRLVKDYKFPQVHISQFYPRPGTPAARMKKVPSTSVKKRSRELT 181
            IICGFPGETD++FAQTV L+++Y+FPQVHISQFYPRPGTPAARMKKVPS  VKKRSRELT
Sbjct: 275  IICGFPGETDEEFAQTVSLIQEYRFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELT 334

Query: 182  SVFESFTPYNGMEGKIERIWITEIATDGKHLVGHTKGYMQVLVVGPGSMLGTSAIIRITS 361
            S+FE+FTPYNGMEG++ERIWI+EIATDG HLVGHTKGYMQVLVV P S++GTSAI++ITS
Sbjct: 335  SIFEAFTPYNGMEGRVERIWISEIATDGIHLVGHTKGYMQVLVVAPRSLMGTSAIVKITS 394

Query: 362  VGRWSVFGEVIETLNLPKDNAESKERSDRSEKCCSPSNLEESCACVGELDACACGHESCG 541
            VGRWSVFGE+IETLN   DN    E      KC   S   E CAC  E + CAC  +SC 
Sbjct: 395  VGRWSVFGELIETLNQVNDNISLNEEKFSLGKCSPCSVPGEICACSREAEPCACEPQSCE 454

Query: 542  GQNLTEEKGGSLPMNDSWADDRSNINVFGWLLRKRENHRTKKIEDDRSAQHIMRQEIASG 721
            G+   EE  GS+   D   +   N N+F WLLR+R+NH  K+IE+  +     ++E   G
Sbjct: 455  GKISMEE--GSVSRKDMLPE---NQNLFKWLLRRRKNHGQKRIENGIAWGSKEKEERDRG 509

Query: 722  SAHMWTAVDRLLLGGM 769
              + W  VDR+LLGG+
Sbjct: 510  CMNHWGLVDRVLLGGI 525


>ref|XP_004141564.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase-like
            [Cucumis sativus]
          Length = 635

 Score =  294 bits (753), Expect = 3e-77
 Identities = 147/264 (55%), Positives = 186/264 (70%), Gaps = 1/264 (0%)
 Frame = +2

Query: 2    IICGFPGETDDDFAQTVRLVKDYKFPQVHISQFYPRPGTPAARMKKVPSTSVKKRSRELT 181
            IICGFPGETD+DF +T+ L+K+Y  PQVHISQFYPRPGTPAARMKKVPS  VKKRSRELT
Sbjct: 357  IICGFPGETDEDFCETINLIKEYNLPQVHISQFYPRPGTPAARMKKVPSAIVKKRSRELT 416

Query: 182  SVFESFTPYNGMEGKIERIWITEIATDGKHLVGHTKGYMQVLVVGPGSMLGTSAIIRITS 361
            SVFE+FTPYNGMEG++ERIWITEIA DG HLVGHTKGY+QVLV+ P +MLGTSA ++ITS
Sbjct: 417  SVFEAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIAPETMLGTSATVKITS 476

Query: 362  VGRWSVFGEVIETLNLPKDNAESKERSDRSEKCCSPSNLEESCACVGELDACACGHESCG 541
            +GRWSVFGEVIE ++       + E +   +K    SN  E+CAC  E ++CACG ESC 
Sbjct: 477  IGRWSVFGEVIEIISTKHHKTTTLEDTLTQDKVSPCSNTHETCACSTEPESCACGLESCK 536

Query: 542  GQNLTEEKGGSLPMNDSWADDRSNINVFGWLLRKRENH-RTKKIEDDRSAQHIMRQEIAS 718
            G     ++  S   N    ++    N+  W+LR+R++H   K+ E +       +Q +A 
Sbjct: 537  GAVAVGDEVNS-SRNVPSPEEPKRKNLIEWVLRRRKSHVLPKREETENPIVTERKQTLAG 595

Query: 719  GSAHMWTAVDRLLLGGMCASFFTI 790
            G    W  VD++L+GG+  S FTI
Sbjct: 596  GRLDEWGVVDKILVGGILISTFTI 619


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