BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016110
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo...   145   4e-33
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g...   143   1e-32
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g...   143   1e-32
gb|AFK45150.1| unknown [Lotus japonicus]                              143   2e-32
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo...   143   2e-32

>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
           vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
           product [Vitis vinifera]
          Length = 88

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/72 (95%), Positives = 71/72 (98%)
 Frame = +3

Query: 51  MATVPVNPKPFLNNLTGKHVIVKLKWGMEYKGFLVSVDSYMNLQLANSEEYIDGQFTGNL 230
           MATVP+NPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLANSEEYIDGQFTGNL
Sbjct: 1   MATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNL 60

Query: 231 GEILIRCNNVLY 266
           GEILIRCNNVLY
Sbjct: 61  GEILIRCNNVLY 72


>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
           gi|77552372|gb|ABA95169.1| small nuclear
           ribonucleoprotein F, putative, expressed [Oryza sativa
           Japonica Group] gi|113645618|dbj|BAF28759.1|
           Os11g0657300 [Oryza sativa Japonica Group]
           gi|215693012|dbj|BAG88432.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218186140|gb|EEC68567.1| hypothetical protein
           OsI_36896 [Oryza sativa Indica Group]
           gi|222616369|gb|EEE52501.1| hypothetical protein
           OsJ_34703 [Oryza sativa Japonica Group]
          Length = 86

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/72 (94%), Positives = 71/72 (98%)
 Frame = +3

Query: 51  MATVPVNPKPFLNNLTGKHVIVKLKWGMEYKGFLVSVDSYMNLQLANSEEYIDGQFTGNL 230
           MATVPVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLAN+EEYIDGQF+GNL
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 231 GEILIRCNNVLY 266
           GEILIRCNNVLY
Sbjct: 61  GEILIRCNNVLY 72


>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
           gi|50252055|dbj|BAD27986.1| putative small nuclear
           ribonucleoprotein polypeptide F [Oryza sativa Japonica
           Group] gi|113535599|dbj|BAF07982.1| Os02g0177500 [Oryza
           sativa Japonica Group]
          Length = 86

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/72 (94%), Positives = 71/72 (98%)
 Frame = +3

Query: 51  MATVPVNPKPFLNNLTGKHVIVKLKWGMEYKGFLVSVDSYMNLQLANSEEYIDGQFTGNL 230
           MATVPVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLAN+EEYIDGQF+GNL
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL 60

Query: 231 GEILIRCNNVLY 266
           GEILIRCNNVLY
Sbjct: 61  GEILIRCNNVLY 72


>gb|AFK45150.1| unknown [Lotus japonicus]
          Length = 88

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/72 (93%), Positives = 71/72 (98%)
 Frame = +3

Query: 51  MATVPVNPKPFLNNLTGKHVIVKLKWGMEYKGFLVSVDSYMNLQLANSEEYIDGQFTGNL 230
           MAT+PVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLAN+EEYI+GQFTGNL
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 231 GEILIRCNNVLY 266
           GEILIRCNNVLY
Sbjct: 61  GEILIRCNNVLY 72


>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
          Length = 88

 Score =  143 bits (360), Expect = 2e-32
 Identities = 67/72 (93%), Positives = 71/72 (98%)
 Frame = +3

Query: 51  MATVPVNPKPFLNNLTGKHVIVKLKWGMEYKGFLVSVDSYMNLQLANSEEYIDGQFTGNL 230
           MAT+PVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLAN+EEYI+GQFTGNL
Sbjct: 1   MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 231 GEILIRCNNVLY 266
           GEILIRCNNVLY
Sbjct: 61  GEILIRCNNVLY 72