BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016106
         (1210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...   560   e-157
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]   559   e-157
ref|XP_002304377.1| predicted protein [Populus trichocarpa] gi|2...   541   e-151
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-...   523   e-146
ref|XP_002519884.1| replication factor A 1, rfa1, putative [Rici...   506   e-141

>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Vitis vinifera]
          Length = 882

 Score =  560 bits (1442), Expect = e-157
 Identities = 275/406 (67%), Positives = 327/406 (80%), Gaps = 3/406 (0%)
 Frame = +2

Query: 2    DHEIMLDSPSTVQPCFEGEHSIPQQRFQFRPINEIEGTENNTIIDVIGVLCSISPSTPIM 181
            DHEI L+S ST+QPCF+ ++SIP+Q+F FR I+++E  ENN+++DVIGV+  ISPS  IM
Sbjct: 362  DHEIFLESTSTIQPCFDDDNSIPRQQFHFRSISDVESMENNSVVDVIGVVSFISPSASIM 421

Query: 182  RKNGTETLKRSLQIKDMSRRSVEVTLWGNFCNAEGQTLQNICDSGVFPVLAVKSAKVNDF 361
            RKNGTET KR+L +KDMS RSVE+TLWGNFCNAEGQ LQN+CDSGVFPVLAVKSA+VNDF
Sbjct: 422  RKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDF 481

Query: 362  SGKTVGTIPTSKVIIEPDIPEAHELKAWMESGGRNAPVSSISRE-TAIGRQDVRKSISQI 538
            +GK VGTI TS++ IEPD PEA +LK W +  GRN P  SISRE T++GR DVRK+ISQI
Sbjct: 482  NGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTSMGRTDVRKTISQI 541

Query: 539  KDENLGTSEKPDWITVTATLSYLKTDNFCYTACPLKIGERQCNKKVINNGDGTWRCEKCD 718
            KDE LGTSEKPDWITV AT+S++K DNFCYTACP+ IG+RQCNKKV NNGDG WRCE+CD
Sbjct: 542  KDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCD 601

Query: 719  QSVEECDYRYILQFQIQDHTGLAWVTGFQEIGEDIFGTSAKELYTMKYEDQDDEKFSEYV 898
            QSV++CDYRYILQFQIQDHTGL WVT FQE GE+I G SAK LY +KYE+QDDEKF E +
Sbjct: 602  QSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEIL 661

Query: 899  RKALFNKYLFKLKVKEETFSDEQRVKSTVVKVDKLDFISETRSLLDSLNKLQGDDPVLVA 1078
            R  LF KY FKLKVKEE FSDEQRVKSTVVK +K++F SE+R LLD + K + +D     
Sbjct: 662  RGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTF-P 720

Query: 1079 LKSENSVLNTAMNNAAHGSVGIKESAQHNVNYMG--STAGQGIGLP 1210
            LKSEN + N  M N   G+VGI++S   +VNY G  S AG+  G P
Sbjct: 721  LKSENVISNGGMTNPGLGNVGIRQSTP-SVNYSGNASNAGRDFGFP 765


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score =  559 bits (1440), Expect = e-157
 Identities = 275/406 (67%), Positives = 326/406 (80%), Gaps = 3/406 (0%)
 Frame = +2

Query: 2    DHEIMLDSPSTVQPCFEGEHSIPQQRFQFRPINEIEGTENNTIIDVIGVLCSISPSTPIM 181
            DHEI L+S ST+QPCF+ ++SIP+Q+F FR I+++E  ENN+++DVIGV+  ISPS  IM
Sbjct: 362  DHEIFLESTSTIQPCFDDDNSIPRQQFHFRXISDVESMENNSVVDVIGVVSFISPSASIM 421

Query: 182  RKNGTETLKRSLQIKDMSRRSVEVTLWGNFCNAEGQTLQNICDSGVFPVLAVKSAKVNDF 361
            RKNGTET KR+L +KDMS RSVE+TLWGNFCNAEGQ LQN+CDSGVFPVLAVKSA+VNDF
Sbjct: 422  RKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDF 481

Query: 362  SGKTVGTIPTSKVIIEPDIPEAHELKAWMESGGRNAPVSSISRE-TAIGRQDVRKSISQI 538
            +GK VGTI TS++ IEPD PEA +LK W +  GRN P  SISRE T +GR DVRK+ISQI
Sbjct: 482  NGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTXMGRTDVRKTISQI 541

Query: 539  KDENLGTSEKPDWITVTATLSYLKTDNFCYTACPLKIGERQCNKKVINNGDGTWRCEKCD 718
            KDE LGTSEKPDWITV AT+S++K DNFCYTACP+ IG+RQCNKKV NNGDG WRCE+CD
Sbjct: 542  KDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCD 601

Query: 719  QSVEECDYRYILQFQIQDHTGLAWVTGFQEIGEDIFGTSAKELYTMKYEDQDDEKFSEYV 898
            QSV++CDYRYILQFQIQDHTGL WVT FQE GE+I G SAK LY +KYE+QDDEKF E +
Sbjct: 602  QSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEIL 661

Query: 899  RKALFNKYLFKLKVKEETFSDEQRVKSTVVKVDKLDFISETRSLLDSLNKLQGDDPVLVA 1078
            R  LF KY FKLKVKEE FSDEQRVKSTVVK +K++F SE+R LLD + K + +D     
Sbjct: 662  RGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTF-P 720

Query: 1079 LKSENSVLNTAMNNAAHGSVGIKESAQHNVNYMG--STAGQGIGLP 1210
            LKSEN + N  M N   G+VGI++S   +VNY G  S AG+  G P
Sbjct: 721  LKSENVISNGGMTNPGLGNVGIRQSTP-SVNYSGNASNAGRDFGFP 765


>ref|XP_002304377.1| predicted protein [Populus trichocarpa] gi|222841809|gb|EEE79356.1|
            predicted protein [Populus trichocarpa]
          Length = 701

 Score =  541 bits (1395), Expect = e-151
 Identities = 260/405 (64%), Positives = 329/405 (81%), Gaps = 2/405 (0%)
 Frame = +2

Query: 2    DHEIMLDSPSTVQPCFEGEHSIPQQRFQFRPINEIEGTENNTIIDVIGVLCSISPSTPIM 181
            D EI L+S ST+QPCFE +++IP+Q+F FRPI+++E  ENN+++DVIGV+ SI+P+T +M
Sbjct: 197  DLEIFLESTSTIQPCFEDDNTIPKQQFHFRPISDVEDMENNSVVDVIGVVTSIAPTTSLM 256

Query: 182  RKNGTETLKRSLQIKDMSRRSVEVTLWGNFCNAEGQTLQNICDSGVFPVLAVKSAKVNDF 361
            RKNGTET KR+LQ+KDMS RSVE+TLWGNFCNAEGQ LQ+ICDSG FPVLAVKS ++++F
Sbjct: 257  RKNGTETQKRTLQLKDMSGRSVELTLWGNFCNAEGQRLQHICDSGGFPVLAVKSGRISEF 316

Query: 362  SGKTVGTIPTSKVIIEPDIPEAHELKAWMESGGRNAPVSSISRETA-IGRQDVRKSISQI 538
            SGK VGTI TS++ IEPD PEA+ LK W +  GRN P  SISRET+ +GR DV K+ISQI
Sbjct: 317  SGKAVGTISTSQLFIEPDSPEANRLKEWFDRDGRNTPSLSISRETSTLGRSDVMKTISQI 376

Query: 539  KDENLGTSEKPDWITVTATLSYLKTDNFCYTACPLKIGERQCNKKVINNGDGTWRCEKCD 718
            KDE LGTSEKPDWITV AT+ Y+K+DNFCYTACP+  GER CNKKV NNGDG WRCEKCD
Sbjct: 377  KDERLGTSEKPDWITVPATVIYVKSDNFCYTACPIMSGERPCNKKVTNNGDGKWRCEKCD 436

Query: 719  QSVEECDYRYILQFQIQDHTGLAWVTGFQEIGEDIFGTSAKELYTMKYEDQDDEKFSEYV 898
            QSV+ECDYRYILQFQIQDHTG++WVT FQE GE+I G SAK+L+ +K+E QDDE FS+ +
Sbjct: 437  QSVDECDYRYILQFQIQDHTGISWVTAFQECGEEIMGISAKDLHYLKHEQQDDEGFSKVL 496

Query: 899  RKALFNKYLFKLKVKEETFSDEQRVKSTVVKVDKLDFISETRSLLDSLNKLQGDDPVLVA 1078
            R+ LF++Y+FKLKVKEETFSDEQRVKSTVVK +K+++ S++R LLD + K +  +    A
Sbjct: 497  RQVLFSRYVFKLKVKEETFSDEQRVKSTVVKSEKVNYSSQSRLLLDMMEKFKSGNDTSFA 556

Query: 1079 LKSENSVLNTAMNNAAHGSVGIKESAQHNVNYMGSTAGQG-IGLP 1210
             K+E+S  N  +NNA  G+ G +++     N +GST+  G +GLP
Sbjct: 557  CKAESSYHNPGVNNAVIGNFGSRQAGPPGSNPVGSTSYTGNVGLP 601


>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cucumis sativus]
          Length = 861

 Score =  523 bits (1347), Expect = e-146
 Identities = 252/408 (61%), Positives = 320/408 (78%), Gaps = 8/408 (1%)
 Frame = +2

Query: 2    DHEIMLDSPSTVQPCFEGEHSIPQQRFQFRPINEIEGTENNTIIDVIGVLCSISPSTPIM 181
            D+EI L++ ST+QPCFE + SIPQQ+F F  I EIEG ++N+++DVIGV+ SI+P+T +M
Sbjct: 358  DYEIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLM 417

Query: 182  RKNGTETLKRSLQIKDMSRRSVEVTLWGNFCNAEGQTLQNICDSGVFPVLAVKSAKVNDF 361
            RKNGTET KRSLQ+KDMS RSVE+TLWGNFC AEGQ LQN+CDSG+FPVLAVKS++V+DF
Sbjct: 418  RKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDF 477

Query: 362  SGKTVGTIPTSKVIIEPDIPEAHELKAWMESGGRNAPVSSISRETA-IGRQDVRKSISQI 538
            +GK VGTI TS++ IEPD PEAH L+ W E  GR+    SISRE A +GR DVRK+ISQI
Sbjct: 478  NGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQI 537

Query: 539  KDENLGTSEKPDWITVTATLSYLKTDNFCYTACPLKIGERQCNKKVINNGDGTWRCEKCD 718
            KDE LGTSEKPDWITV+AT+S++K D+FCYTACP+ IG+RQC+KKV NNGDG WRC++CD
Sbjct: 538  KDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCD 597

Query: 719  QSVEECDYRYILQFQIQDHTGLAWVTGFQEIGEDIFGTSAKELYTMKYEDQDDEKFSEYV 898
            QSV+ECDYRYILQ QIQDHTGL WVT FQE GE+I G  AK LY +KYE+QDDEKF+E +
Sbjct: 598  QSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEII 657

Query: 899  RKALFNKYLFKLKVKEETFSDEQRVKSTVVKVDKLDFISETRSLLDSLNKLQGDDPVLVA 1078
            RK LF K++ KLK+KEETFSDEQRV+STVVK + ++F SE+R LL+ + KL+ ++     
Sbjct: 658  RKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSAT 717

Query: 1079 LKSENSVLNTAMNNAAHGSVG-------IKESAQHNVNYMGSTAGQGI 1201
             K+E+++ N    + A  ++G       I+ S   +  Y   T  QG+
Sbjct: 718  PKAESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREY--GTPNQGV 763


>ref|XP_002519884.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223540930|gb|EEF42488.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 901

 Score =  506 bits (1303), Expect = e-141
 Identities = 240/397 (60%), Positives = 310/397 (78%), Gaps = 1/397 (0%)
 Frame = +2

Query: 2    DHEIMLDSPSTVQPCFEGEHSIPQQRFQFRPINEIEGTENNTIIDVIGVLCSISPSTPIM 181
            D EI L+S S +QPCFE + +IP+Q+F FRPI+E+EG +NN+++D+IG++  I+P   IM
Sbjct: 375  DLEIFLESNSVIQPCFEDDDAIPRQQFHFRPISEVEGMDNNSVVDIIGMVSCITPVASIM 434

Query: 182  RKNGTETLKRSLQIKDMSRRSVEVTLWGNFCNAEGQTLQNICDSGVFPVLAVKSAKVNDF 361
            RKNGTET KR+LQ+KD S RSVE+TLWGNFCNAEGQ LQN+CDSG FPVLAVKS +V+DF
Sbjct: 435  RKNGTETQKRTLQLKDNSGRSVELTLWGNFCNAEGQRLQNMCDSGGFPVLAVKSGRVSDF 494

Query: 362  SGKTVGTIPTSKVIIEPDIPEAHELKAWMESGGRNAPVSSISRE-TAIGRQDVRKSISQI 538
            +GK VGTI TS++ IEPDIPEA  LK W E  GRN P  SISRE +++GR ++ K+ISQI
Sbjct: 495  NGKAVGTISTSQLFIEPDIPEARRLKEWFEKEGRNTPSVSISRELSSVGRSEIHKTISQI 554

Query: 539  KDENLGTSEKPDWITVTATLSYLKTDNFCYTACPLKIGERQCNKKVINNGDGTWRCEKCD 718
            KDE LGTSEKPDWIT+ AT+ Y+K DNFCYTACP+  G+R C+KKV NNGDG WRCEKCD
Sbjct: 555  KDEKLGTSEKPDWITINATVIYIKADNFCYTACPIMAGDRPCSKKVTNNGDGKWRCEKCD 614

Query: 719  QSVEECDYRYILQFQIQDHTGLAWVTGFQEIGEDIFGTSAKELYTMKYEDQDDEKFSEYV 898
            QS++ECDYRYILQ Q+QDHTG+ WVT FQE GE+I G SAK+L+ MKYE+QDDE FS+ +
Sbjct: 615  QSMDECDYRYILQLQLQDHTGITWVTAFQESGEEIMGISAKDLHFMKYENQDDESFSKIL 674

Query: 899  RKALFNKYLFKLKVKEETFSDEQRVKSTVVKVDKLDFISETRSLLDSLNKLQGDDPVLVA 1078
            R+ LF+K++ KLKVKEETFSDEQRVKSTVV+ +K++  S++R LL+ + K +  + +  A
Sbjct: 675  RQVLFSKFVIKLKVKEETFSDEQRVKSTVVRAEKVNHSSQSRFLLEIMEKYKSGNSIPSA 734

Query: 1079 LKSENSVLNTAMNNAAHGSVGIKESAQHNVNYMGSTA 1189
               E++  N+  N     S+G +     N N +G ++
Sbjct: 735  SNVESNYPNSGANTGI-DSIGSRIGGSLNSNQVGKSS 770