BLASTX nr result

ID: Cnidium21_contig00016079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016079
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250...    80   5e-28
emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]    80   5e-28
emb|CBI33920.3| unnamed protein product [Vitis vinifera]               80   5e-28
ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu...    87   5e-28
ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-25

>ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera]
          Length = 1105

 Score = 80.5 bits (197), Expect(2) = 5e-28
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = -2

Query: 138  RMLRNMGWQEGLGLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDP 4
            RMLR+MGWQEG GLGKDGSGMVEPVQAQ+++ RAGLGS  KKLDP
Sbjct: 1035 RMLRSMGWQEGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKKLDP 1079



 Score = 70.5 bits (171), Expect(2) = 5e-28
 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = -3

Query: 371  LFVNTKDRDPAFKRAVTDSMPFPPGVGG-RGVTDGNYNVQSYEVITAEKAIDE 216
            L +    RD AFK+   DSMPFPPGVGG RG+ D N NVQSYEVITA+KAIDE
Sbjct: 977  LGIGDSTRDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDE 1029


>emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]
          Length = 1070

 Score = 80.5 bits (197), Expect(2) = 5e-28
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = -2

Query: 138  RMLRNMGWQEGLGLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDP 4
            RMLR+MGWQEG GLGKDGSGMVEPVQAQ+++ RAGLGS  KKLDP
Sbjct: 1000 RMLRSMGWQEGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKKLDP 1044



 Score = 70.5 bits (171), Expect(2) = 5e-28
 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = -3

Query: 371  LFVNTKDRDPAFKRAVTDSMPFPPGVGG-RGVTDGNYNVQSYEVITAEKAIDE 216
            L +    RD AFK+   DSMPFPPGVGG RG+ D N NVQSYEVITA+KAIDE
Sbjct: 942  LGIGDSTRDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDE 994


>emb|CBI33920.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score = 80.5 bits (197), Expect(2) = 5e-28
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = -2

Query: 138  RMLRNMGWQEGLGLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDP 4
            RMLR+MGWQEG GLGKDGSGMVEPVQAQ+++ RAGLGS  KKLDP
Sbjct: 959  RMLRSMGWQEGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKKLDP 1003



 Score = 70.5 bits (171), Expect(2) = 5e-28
 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
 Frame = -3

Query: 371  LFVNTKDRDPAFKRAVTDSMPFPPGVGG-RGVTDGNYNVQSYEVITAEKAIDE 216
            L +    RD AFK+   DSMPFPPGVGG RG+ D N NVQSYEVITA+KAIDE
Sbjct: 901  LGIGDSTRDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDE 953


>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
            gi|223527250|gb|EEF29409.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 962

 Score = 86.7 bits (213), Expect(2) = 5e-28
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -2

Query: 138  RMLRNMGWQEGLGLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDPS 1
            RMLR+MGW EGLGLGKDGSGM+EPVQAQ+ EKRAGLGSQ KKLDPS
Sbjct: 889  RMLRSMGWHEGLGLGKDGSGMIEPVQAQATEKRAGLGSQQKKLDPS 934



 Score = 64.3 bits (155), Expect(2) = 5e-28
 Identities = 32/47 (68%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = -3

Query: 353 DRDPAFKRAVTDSMPFPPGVGG-RGVTDGNYNVQSYEVITAEKAIDE 216
           +RD  FK+   DSMPFPPGVGG RG  D + N QSYEVITA+KAIDE
Sbjct: 837 NRDLPFKKGSLDSMPFPPGVGGGRGAGDASINTQSYEVITADKAIDE 883


>ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|222848862|gb|EEE86409.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 85.9 bits (211), Expect(2) = 4e-25
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -2

Query: 138  RMLRNMGWQEGLGLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDPS 1
            RMLRNMGWQEG GLGKDG GMVEPVQAQ++++RAGLGSQ KKLDPS
Sbjct: 953  RMLRNMGWQEGSGLGKDGGGMVEPVQAQAIDRRAGLGSQQKKLDPS 998



 Score = 55.5 bits (132), Expect(2) = 4e-25
 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = -3

Query: 350  RDPAFKRAVTDSMPFPPGV-GGRGVTDGNYNVQSYEVITAEKAIDE 216
            R+ AFKR+  DSMPFPPGV GGRG+ D     QSYEVIT +KA+ E
Sbjct: 906  RESAFKRSALDSMPFPPGVGGGRGIGD----AQSYEVITVDKALGE 947


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