BLASTX nr result
ID: Cnidium21_contig00016079
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00016079 (778 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250... 80 5e-28 emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera] 80 5e-28 emb|CBI33920.3| unnamed protein product [Vitis vinifera] 80 5e-28 ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu... 87 5e-28 ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|2... 86 4e-25 >ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera] Length = 1105 Score = 80.5 bits (197), Expect(2) = 5e-28 Identities = 37/45 (82%), Positives = 41/45 (91%) Frame = -2 Query: 138 RMLRNMGWQEGLGLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDP 4 RMLR+MGWQEG GLGKDGSGMVEPVQAQ+++ RAGLGS KKLDP Sbjct: 1035 RMLRSMGWQEGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKKLDP 1079 Score = 70.5 bits (171), Expect(2) = 5e-28 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 1/53 (1%) Frame = -3 Query: 371 LFVNTKDRDPAFKRAVTDSMPFPPGVGG-RGVTDGNYNVQSYEVITAEKAIDE 216 L + RD AFK+ DSMPFPPGVGG RG+ D N NVQSYEVITA+KAIDE Sbjct: 977 LGIGDSTRDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDE 1029 >emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera] Length = 1070 Score = 80.5 bits (197), Expect(2) = 5e-28 Identities = 37/45 (82%), Positives = 41/45 (91%) Frame = -2 Query: 138 RMLRNMGWQEGLGLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDP 4 RMLR+MGWQEG GLGKDGSGMVEPVQAQ+++ RAGLGS KKLDP Sbjct: 1000 RMLRSMGWQEGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKKLDP 1044 Score = 70.5 bits (171), Expect(2) = 5e-28 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 1/53 (1%) Frame = -3 Query: 371 LFVNTKDRDPAFKRAVTDSMPFPPGVGG-RGVTDGNYNVQSYEVITAEKAIDE 216 L + RD AFK+ DSMPFPPGVGG RG+ D N NVQSYEVITA+KAIDE Sbjct: 942 LGIGDSTRDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDE 994 >emb|CBI33920.3| unnamed protein product [Vitis vinifera] Length = 1029 Score = 80.5 bits (197), Expect(2) = 5e-28 Identities = 37/45 (82%), Positives = 41/45 (91%) Frame = -2 Query: 138 RMLRNMGWQEGLGLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDP 4 RMLR+MGWQEG GLGKDGSGMVEPVQAQ+++ RAGLGS KKLDP Sbjct: 959 RMLRSMGWQEGSGLGKDGSGMVEPVQAQAMDSRAGLGSHQKKLDP 1003 Score = 70.5 bits (171), Expect(2) = 5e-28 Identities = 36/53 (67%), Positives = 40/53 (75%), Gaps = 1/53 (1%) Frame = -3 Query: 371 LFVNTKDRDPAFKRAVTDSMPFPPGVGG-RGVTDGNYNVQSYEVITAEKAIDE 216 L + RD AFK+ DSMPFPPGVGG RG+ D N NVQSYEVITA+KAIDE Sbjct: 901 LGIGDSTRDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDE 953 >ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis] gi|223527250|gb|EEF29409.1| RNA-binding protein, putative [Ricinus communis] Length = 962 Score = 86.7 bits (213), Expect(2) = 5e-28 Identities = 40/46 (86%), Positives = 43/46 (93%) Frame = -2 Query: 138 RMLRNMGWQEGLGLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDPS 1 RMLR+MGW EGLGLGKDGSGM+EPVQAQ+ EKRAGLGSQ KKLDPS Sbjct: 889 RMLRSMGWHEGLGLGKDGSGMIEPVQAQATEKRAGLGSQQKKLDPS 934 Score = 64.3 bits (155), Expect(2) = 5e-28 Identities = 32/47 (68%), Positives = 36/47 (76%), Gaps = 1/47 (2%) Frame = -3 Query: 353 DRDPAFKRAVTDSMPFPPGVGG-RGVTDGNYNVQSYEVITAEKAIDE 216 +RD FK+ DSMPFPPGVGG RG D + N QSYEVITA+KAIDE Sbjct: 837 NRDLPFKKGSLDSMPFPPGVGGGRGAGDASINTQSYEVITADKAIDE 883 >ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|222848862|gb|EEE86409.1| predicted protein [Populus trichocarpa] Length = 1023 Score = 85.9 bits (211), Expect(2) = 4e-25 Identities = 39/46 (84%), Positives = 43/46 (93%) Frame = -2 Query: 138 RMLRNMGWQEGLGLGKDGSGMVEPVQAQSVEKRAGLGSQPKKLDPS 1 RMLRNMGWQEG GLGKDG GMVEPVQAQ++++RAGLGSQ KKLDPS Sbjct: 953 RMLRNMGWQEGSGLGKDGGGMVEPVQAQAIDRRAGLGSQQKKLDPS 998 Score = 55.5 bits (132), Expect(2) = 4e-25 Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%) Frame = -3 Query: 350 RDPAFKRAVTDSMPFPPGV-GGRGVTDGNYNVQSYEVITAEKAIDE 216 R+ AFKR+ DSMPFPPGV GGRG+ D QSYEVIT +KA+ E Sbjct: 906 RESAFKRSALDSMPFPPGVGGGRGIGD----AQSYEVITVDKALGE 947