BLASTX nr result

ID: Cnidium21_contig00016057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00016057
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462157.1| hypothetical protein SORBIDRAFT_02g020763 [S...    67   4e-12
ref|XP_002451559.1| hypothetical protein SORBIDRAFT_04g003730 [S...    65   1e-09
ref|NP_001058142.2| Os06g0635500 [Oryza sativa Japonica Group] g...    64   2e-09
ref|XP_002442864.1| hypothetical protein SORBIDRAFT_08g004060 [S...    52   7e-09
ref|NP_001176850.1| Os12g0228500 [Oryza sativa Japonica Group] g...    66   1e-08

>ref|XP_002462157.1| hypothetical protein SORBIDRAFT_02g020763 [Sorghum bicolor]
           gi|242093256|ref|XP_002437118.1| hypothetical protein
           SORBIDRAFT_10g021355 [Sorghum bicolor]
           gi|241915341|gb|EER88485.1| hypothetical protein
           SORBIDRAFT_10g021355 [Sorghum bicolor]
           gi|241925534|gb|EER98678.1| hypothetical protein
           SORBIDRAFT_02g020763 [Sorghum bicolor]
          Length = 270

 Score = 67.0 bits (162), Expect(2) = 4e-12
 Identities = 30/54 (55%), Positives = 38/54 (70%)
 Frame = +1

Query: 229 WLNISLDPVQGTNQTQMTYSSRIWTYFNEHKTFASDRTPTCLCNRWSAIQTSVS 390
           WLN+SLDPV+G +Q + TY  RI  +F+ HK F+SDRT   L NRWS IQ  V+
Sbjct: 23  WLNVSLDPVKGVDQARTTYWKRIHAHFHAHKDFSSDRTQGSLVNRWSGIQHDVN 76



 Score = 31.2 bits (69), Expect(2) = 4e-12
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 395 FIGYYNQINRRNASGLTEQDKVRRAMKM 478
           F GY ++I  RN SG+T  DK   A+KM
Sbjct: 78  FAGYLSKIENRNQSGMTIDDKQADALKM 105


>ref|XP_002451559.1| hypothetical protein SORBIDRAFT_04g003730 [Sorghum bicolor]
           gi|241931390|gb|EES04535.1| hypothetical protein
           SORBIDRAFT_04g003730 [Sorghum bicolor]
          Length = 310

 Score = 65.5 bits (158), Expect(2) = 1e-09
 Identities = 29/54 (53%), Positives = 39/54 (72%)
 Frame = +1

Query: 229 WLNISLDPVQGTNQTQMTYSSRIWTYFNEHKTFASDRTPTCLCNRWSAIQTSVS 390
           WLN+SLDPV+G +Q++ TY  RI  +F+ HK F+SDR+   L NRWS IQ  V+
Sbjct: 66  WLNVSLDPVKGVDQSRTTYWKRIHEHFHTHKDFSSDRSQGSLMNRWSGIQHDVN 119



 Score = 23.9 bits (50), Expect(2) = 1e-09
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 395 FIGYYNQINRRNASGLTEQDKVRRAMKM 478
           F G  ++I  RN SG+T   K   A+KM
Sbjct: 121 FAGCLSKIEGRNQSGVTIDGKQADALKM 148


>ref|NP_001058142.2| Os06g0635500 [Oryza sativa Japonica Group]
           gi|51535904|dbj|BAD37987.1| NAM-like protein [Oryza
           sativa Japonica Group] gi|125597958|gb|EAZ37738.1|
           hypothetical protein OsJ_22078 [Oryza sativa Japonica
           Group] gi|255677255|dbj|BAF20056.2| Os06g0635500 [Oryza
           sativa Japonica Group]
          Length = 376

 Score = 63.9 bits (154), Expect(2) = 2e-09
 Identities = 28/54 (51%), Positives = 39/54 (72%)
 Frame = +1

Query: 229 WLNISLDPVQGTNQTQMTYSSRIWTYFNEHKTFASDRTPTCLCNRWSAIQTSVS 390
           WLN+ +DP+QG +Q+Q TY +RI  YF+ +K F S R+ + L NRWSAIQ  V+
Sbjct: 124 WLNVGMDPIQGVDQSQGTYWARIHEYFHANKEFESTRSESSLLNRWSAIQHDVN 177



 Score = 25.0 bits (53), Expect(2) = 2e-09
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 140 DQLSQQDPT--KQRKGR**NFTMEKDMLLISGG*TLAWI 250
           D +S   PT  K  +GR  NFT ++D+LL+S     AW+
Sbjct: 92  DPISNGAPTAAKISQGRTKNFTTQEDILLVS-----AWL 125


>ref|XP_002442864.1| hypothetical protein SORBIDRAFT_08g004060 [Sorghum bicolor]
           gi|241943557|gb|EES16702.1| hypothetical protein
           SORBIDRAFT_08g004060 [Sorghum bicolor]
          Length = 371

 Score = 52.4 bits (124), Expect(2) = 7e-09
 Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
 Frame = +1

Query: 121 SQLSH*RSVKPTRSNQTTKRSIIKLYN-GKGYVTHIRWLNISLDPVQGTNQTQMTYSSRI 297
           +Q+S    V  +R NQ TKRS  K +N  +  +    WL  S DP+ G NQ + ++  ++
Sbjct: 36  TQISPDIEVVASRGNQGTKRS--KNFNVEEDELVCEGWLAASKDPLHGANQNRTSFWGKV 93

Query: 298 WTYFNEH-KTFASDRTPTCLCNRWSAIQTSVSK 393
             YF ++ KT A  RT + L +RW  IQT V+K
Sbjct: 94  HAYFEKNKKTDAPSRTASSLLHRWLTIQTLVNK 126



 Score = 34.7 bits (78), Expect(2) = 7e-09
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = +2

Query: 392 KFIGYYNQINRRNASGLTEQDKVRRAMKM 478
           KF   Y+ I RRN SG T QDK+  A+KM
Sbjct: 126 KFCSCYDAIERRNQSGTTIQDKIASALKM 154


>ref|NP_001176850.1| Os12g0228500 [Oryza sativa Japonica Group]
           gi|255670162|dbj|BAH95578.1| Os12g0228500 [Oryza sativa
           Japonica Group]
          Length = 177

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/55 (52%), Positives = 40/55 (72%)
 Frame = +1

Query: 229 WLNISLDPVQGTNQTQMTYSSRIWTYFNEHKTFASDRTPTCLCNRWSAIQTSVSK 393
           W+N+S DPVQGT+Q+  TY  RI  YF+++K F SDR+ + L +RWS IQ  V+K
Sbjct: 72  WINVSFDPVQGTDQSHGTYWGRIHDYFHQNKEFESDRSQSSLVHRWSTIQEHVNK 126


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